Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G12280 Arabidopsis thaliana HOM05D004629 ORTHO05D019743 1.1e-46 189.5 91 100.0
Aa31LG10G3810 Aethionema arabicum HOM05D004629 ORTHO05D006604 3.7e-37 157.9 74 100.0
AL1G58130 Arabidopsis lyrata HOM05D004629 ORTHO05D006604 3.7e-37 157.9 74 100.0
AT1G50480 Arabidopsis thaliana HOM05D004629 ORTHO05D006604 3.7e-37 157.9 74 100.0
BcaB07g33484 Brassica carinata HOM05D004629 ORTHO05D006604 3.7e-37 157.9 74 100.0
BcaC05g27413 Brassica carinata HOM05D004629 ORTHO05D006604 3.7e-37 157.9 74 100.0
A05p20130 Brassica napus HOM05D004629 ORTHO05D006604 3.7e-37 157.9 74 100.0
BraA05t20921Z Brassica rapa HOM05D004629 ORTHO05D006604 3.7e-37 157.9 74 100.0
Sp1g37320 Schrenkiella parvula HOM05D004629 ORTHO05D006604 3.7e-37 157.9 74 100.0
C05p33610 Brassica napus HOM05D004629 ORTHO05D006604 4.8e-37 157.5 74 98.6
BolC5t32091H Brassica oleracea HOM05D004629 ORTHO05D006604 4.8e-37 157.5 74 98.6
BcaC08g43218 Brassica carinata HOM05D004629 ORTHO05D006604 8.1e-37 156.8 74 98.6
A06p03100 Brassica napus HOM05D004629 ORTHO05D006604 8.1e-37 156.8 74 98.6
C06p05660 Brassica napus HOM05D004629 ORTHO05D006604 8.1e-37 156.8 74 98.6
BolC6t35677H Brassica oleracea HOM05D004629 ORTHO05D006604 8.1e-37 156.8 74 98.6
BraA06t23523Z Brassica rapa HOM05D004629 ORTHO05D006604 8.1e-37 156.8 74 98.6
Carub.0001s3955 Capsella rubella HOM05D004629 ORTHO05D006604 8.1e-37 156.8 74 98.6
Thhalv10011315m.g Eutrema salsugineum HOM05D004629 ORTHO05D006604 1.4e-36 156.0 74 98.6
BcaB02g11151 Brassica carinata HOM05D004629 ORTHO05D006604 1.8e-36 155.6 74 98.6
CARHR040480 Cardamine hirsuta HOM05D004629 ORTHO05D006604 2.4e-36 155.2 74 97.3
Nitab4.5_0005132g0060 Nicotiana tabacum HOM05D004629 ORTHO05D006604 2.6e-35 151.8 77 89.6
Solyc01g006280.3 Solanum lycopersicum HOM05D004629 ORTHO05D006604 4.5e-35 151.0 77 89.6
Sopen01g002270 Solanum pennellii HOM05D004629 ORTHO05D006604 4.5e-35 151.0 77 89.6
PGSC0003DMG400032146 Solanum tuberosum HOM05D004629 ORTHO05D006604 4.5e-35 151.0 77 89.6
TWI60G1346 Tripterygium wilfordii HOM05D004629 ORTHO05D006604 5.8e-35 150.6 74 93.2
CAN.G140.2 Capsicum annuum HOM05D004629 ORTHO05D006604 7.6e-35 150.2 77 89.6
Nitab4.5_0008074g0010 Nicotiana tabacum HOM05D004629 ORTHO05D006604 1.3e-34 149.4 77 88.3
THA.LOC104806618 Tarenaya hassleriana HOM05D004629 ORTHO05D006604 3.8e-34 147.9 77 87.0
Migut.N02273 Erythranthe guttata HOM05D004629 ORTHO05D006604 8.4e-34 146.7 74 90.5
Peaxi162Scf00192g00022 Petunia axillaris HOM05D004629 ORTHO05D006604 1.4e-33 146.0 77 85.7
DCAR_024372 Daucus carota HOM05D004629 ORTHO05D006604 1.9e-33 145.6 74 90.5
Oeu046515.2 Olea europaea HOM05D004629 ORTHO05D006604 1.9e-33 145.6 74 87.8
Sed0008832 Sechium edule HOM05D004629 ORTHO05D006604 2.4e-33 145.2 77 87.0
Gohir.D04G015400 Gossypium hirsutum HOM05D004629 ORTHO05D006604 3.2e-33 144.8 74 87.8
Gorai.012G017900 Gossypium raimondii HOM05D004629 ORTHO05D006604 3.2e-33 144.8 74 87.8
Os09g0446800 Oryza sativa ssp. japonica HOM05D004629 ORTHO05D006604 3.2e-33 144.8 74 90.5
Duzib128G1447 Durio zibethinus HOM05D004629 ORTHO05D006604 4.2e-33 144.4 74 87.8
CANSAT11G0664 Cannabis sativa HOM05D004629 ORTHO05D006604 5.5e-33 144.1 74 89.2
MELO3C015653.2 Cucumis melo HOM05D004629 ORTHO05D006604 7.1e-33 143.7 74 87.8
Oeu038860.1 Olea europaea HOM05D004629 ORTHO05D006604 7.1e-33 143.7 74 87.8
Cfa009633 Carpinus fangiana HOM05D004629 ORTHO05D006604 9.3e-33 143.3 74 86.5
Haze_23000 Corylus avellana HOM05D004629 ORTHO05D006604 9.3e-33 143.3 74 86.5
Eucgr.B02610 Eucalyptus grandis HOM05D004629 ORTHO05D006604 9.3e-33 143.3 74 87.8
Gohir.A05G400500 Gossypium hirsutum HOM05D004629 ORTHO05D006604 9.3e-33 143.3 74 86.5
HanXRQChr07g0196791 Helianthus annuus HOM05D004629 ORTHO05D006604 9.3e-33 143.3 74 89.2
Lj2A677T24 Lonicera japonica HOM05D004629 ORTHO05D006604 9.3e-33 143.3 77 85.7
Hund21652 Selenicereus undatus HOM05D004629 ORTHO05D006604 9.3e-33 143.3 74 85.1
Ciclev10014585m.g Citrus clementina HOM05D004629 ORTHO05D006604 1.2e-32 142.9 74 86.5
QL01p010068 Quercus lobata HOM05D004629 ORTHO05D006604 1.2e-32 142.9 74 86.5
Actinidia06301 Actinidia chinensis HOM05D004629 ORTHO05D006604 1.6e-32 142.5 74 87.8
MSTRG.18392 Avicennia marina HOM05D004629 ORTHO05D006604 1.6e-32 142.5 74 87.8
CiPaw.13G171100 Carya illinoinensis HOM05D004629 ORTHO05D006604 1.6e-32 142.5 77 83.1
MD11G1015100 Malus domestica HOM05D004629 ORTHO05D006604 1.6e-32 142.5 74 86.5
Prupe.6G013000 Prunus persica HOM05D004629 ORTHO05D006604 1.6e-32 142.5 74 86.5
Cc01_g02770 Coffea canephora HOM05D004629 ORTHO05D006604 2.1e-32 142.1 74 86.5
CsaV3_1G042270 Cucumis sativus L. HOM05D004629 ORTHO05D006604 2.1e-32 142.1 74 86.5
Potri.001G010800 Populus trichocarpa HOM05D004629 ORTHO05D006604 2.1e-32 142.1 74 86.5
PGR119G2006 Punica granatum HOM05D004629 ORTHO05D006604 2.1e-32 142.1 77 81.8
SGA_v2.0_scaffold1G00754 Striga asiatica HOM05D004629 ORTHO05D006604 2.1e-32 142.1 74 86.5
EL10Ac4g10337 Beta vulgaris HOM05D004629 ORTHO05D006604 2.7e-32 141.7 74 85.1
SalBow2G2882 Salvia bowleyana HOM05D004629 ORTHO05D006604 2.7e-32 141.7 74 87.8
ClCG03G013940 Citrullus lanatus HOM05D004629 ORTHO05D006604 3.5e-32 141.4 74 86.5
Dinv36331 Davidia involucrata HOM05D004629 ORTHO05D006604 3.5e-32 141.4 74 85.1
MD03G1012400 Malus domestica HOM05D004629 ORTHO05D006604 3.5e-32 141.4 74 86.5
Manes.03G089535 Manihot esculenta HOM05D004629 ORTHO05D006604 3.5e-32 141.4 74 83.8
CSS0018441 Camellia sinensis var. sinensis HOM05D004629 ORTHO05D006604 4.6e-32 141.0 74 87.8
Sc09g0000300 Simmondsia chinensis HOM05D004629 ORTHO05D006604 4.6e-32 141.0 74 83.8
GSVIVG01025376001 Vitis vinifera HOM05D004629 ORTHO05D006604 4.6e-32 141.0 74 87.8
Atru.chr3.2163_Atru.chr3.2169 Acer truncatum HOM05D004629 ORTHO05D006604 6.0e-32 140.6 74 86.5
ATR0598G234 Amborella trichopoda HOM05D004629 ORTHO05D006604 6.0e-32 140.6 77 83.1
Lsat_1_v5_gn_2_101421 Lactuca sativa HOM05D004629 ORTHO05D006604 6.0e-32 140.6 74 86.5
TAR369G0186 Trochodendron aralioides HOM05D004629 ORTHO05D006604 6.0e-32 140.6 96 70.8
Zm00001eb314490 Zea mays HOM05D004629 ORTHO05D006604 6.0e-32 140.6 74 86.5
ECA238G3810 Erigeron canadensis HOM05D004629 ORTHO05D006604 7.9e-32 140.2 74 86.5
vmacro16237 Vaccinium macrocarpon HOM05D004629 ORTHO05D006604 7.9e-32 140.2 74 86.5
Ah.04g161630 Amaranthus hybridus HOM05D004629 ORTHO05D006604 1.0e-31 139.8 74 85.1
MBI13_g20490_MAGBIO Magnolia biondii HOM05D004629 ORTHO05D006604 1.0e-31 139.8 74 86.5
unitig_22.g5473 Utricularia gibba HOM05D004629 ORTHO05D006604 1.0e-31 139.8 74 82.4
Lj5g0025778 Lotus japonicus HOM05D004629 ORTHO05D006604 1.3e-31 139.4 74 85.1
Lalb_Chr02g0143781 Lupinus albus HOM05D004629 ORTHO05D006604 1.3e-31 139.4 74 85.1
Nn7g35985 Nelumbo nucifera HOM05D004629 ORTHO05D019743 1.3e-31 139.4 74 85.1
Psat6g238880 Pisum sativum HOM05D004629 ORTHO05D006604 1.3e-31 139.4 74 86.5
Thecc.10G155600 Theobroma cacao HOM05D004629 ORTHO05D006604 1.3e-31 139.4 74 86.5
Phvul.007G006400 Phaseolus vulgaris HOM05D004629 ORTHO05D006604 1.8e-31 139.0 74 86.5
Sabra03G0160400 Salix brachista HOM05D004629 ORTHO05D006604 1.8e-31 139.0 74 83.8
VMungo0720G3137 Vigna mungo HOM05D004629 ORTHO05D006604 1.8e-31 139.0 74 86.5
Aqoxy2G00099 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 2.3e-31 138.7 74 85.1
AUR62019209 Chenopodium quinoa HOM05D004629 ORTHO05D006604 2.3e-31 138.7 74 83.8
Lalb_Chr06g0164051 Lupinus albus HOM05D004629 ORTHO05D006604 2.3e-31 138.7 74 85.1
Glyma.20G243700 Glycine max HOM05D004629 ORTHO05D006604 3.0e-31 138.3 74 85.1
TPR.G10403 Trifolium pratense HOM05D004629 ORTHO05D006604 3.0e-31 138.3 74 83.8
arahy.Tifrunner.gnm1.ann1.MLY2RP Arachis hypogaea HOM05D004629 ORTHO05D006604 3.9e-31 137.9 74 83.8
arahy.Tifrunner.gnm1.ann1.XFL7KU Arachis hypogaea HOM05D004629 ORTHO05D006604 3.9e-31 137.9 74 83.8
CBR_g29353 Chara braunii HOM05D004629 ORTHO05D006604 5.1e-31 137.5 74 82.4
AUR62000039 Chenopodium quinoa HOM05D004629 ORTHO05D006604 5.1e-31 137.5 74 82.4
ECA248G3511 Erigeron canadensis HOM05D004629 ORTHO05D006604 5.1e-31 137.5 74 83.8
Rhsim01G0186400 Rhododendron simsii HOM05D004629 ORTHO05D006604 5.1e-31 137.5 74 85.1
Ca_11347_v3 Cicer arietinum L. HOM05D004629 ORTHO05D006604 6.7e-31 137.1 74 82.4
Medtr1g116140 Medicago truncatula HOM05D004629 ORTHO05D006604 6.7e-31 137.1 74 82.4
Medtr5g059390 Medicago truncatula HOM05D004629 ORTHO05D006604 6.7e-31 137.1 74 82.4
Cre13.g566000 Chlamydomonas reinhardtii HOM05D004629 ORTHO05D006604 8.7e-31 136.7 73 80.8
Nn2g15715 Nelumbo nucifera HOM05D004629 ORTHO05D019743 8.7e-31 136.7 74 83.8
HPP92_005763 Vanilla planifolia HOM05D004629 ORTHO05D006604 8.7e-31 136.7 74 83.8
FAN11G0302 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.5e-30 136.0 74 83.8
FAN16G0373 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.5e-30 136.0 74 83.8
FAN25G1401 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.5e-30 136.0 74 83.8
HanXRQChr11g0344961 Helianthus annuus HOM05D004629 ORTHO05D006604 1.5e-30 136.0 74 83.8
SMO364G0493 Selaginella moellendorffii HOM05D004629 ORTHO05D006604 1.5e-30 136.0 74 81.1
Glyma.10G293800 Glycine max HOM05D004629 ORTHO05D006604 1.9e-30 135.6 74 83.8
Potri.003G215100 Populus trichocarpa HOM05D004629 ORTHO05D006604 1.9e-30 135.6 74 82.4
RcHm_v2.0_Chr5g0081161 Rosa chinensis HOM05D004629 ORTHO05D006604 2.5e-30 135.2 74 83.8
Cfa009637 Carpinus fangiana HOM05D004629 ORTHO05D006604 4.3e-30 134.4 74 81.1
Lsat_1_v5_gn_1_68420 Lactuca sativa HOM05D004629 ORTHO05D006604 7.4e-30 133.7 74 81.1
PSO384G3664 Papaver somniferum HOM05D004629 ORTHO05D006604 1.6e-29 132.5 74 81.1
PSO339G6259 Papaver somniferum HOM05D004629 ORTHO05D006604 2.8e-29 131.7 74 79.7
Pp3c15_21130 Physcomitrium patens HOM05D004629 ORTHO05D006604 4.8e-29 131.0 73 76.7
Mapoly0009s0223 Marchantia polymorpha HOM05D004629 ORTHO05D006604 1.3e-26 122.9 73 69.9
CDE05G0143 Ceratophyllum demersum HOM05D004629 ORTHO05D019743 2.2e-26 122.1 75 76.0
Ciclev10014598m.g Citrus clementina HOM05D004629 ORTHO05D006604 1.9e-25 119.0 73 76.7
CDE05G3086 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 1.2e-24 116.3 77 71.4
MCO09G252 Micromonas commoda HOM05D004629 ORTHO05D006604 1.2e-24 116.3 74 71.6
AT2G12200 Arabidopsis thaliana HOM05D004629 ORTHO05D019743 5.7e-22 107.5 63 81.0
CDE05G1726 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 3.1e-20 101.7 58 81.0
Cfa022255 Carpinus fangiana HOM05D004629 ORTHO05D006604 5.3e-20 100.9 73 58.9
Psat4g081640 Pisum sativum HOM05D004629 ORTHO05D019743 1.3e-18 96.3 59 76.3
Psat4g081680 Pisum sativum HOM05D004629 ORTHO05D019743 1.7e-18 95.9 59 76.3
Haze_26090 Corylus avellana HOM05D004629 ORTHO05D006604 2.5e-17 92.0 70 55.7
Psat4g161960 Pisum sativum HOM05D001026 ORTHO05D007776 7.2e-17 90.5 58 74.1
CDE05G1958 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 1.4e-15 86.3 77 58.4
PRCOL_00001239 Prasinoderma coloniale HOM05D004629 ORTHO05D006604 4.3e-14 81.3 70 47.1
Haze_27099 Corylus avellana HOM05D004629 ORTHO05D006604 7.9e-08 60.5 58 43.1
ECA248G2032 Erigeron canadensis HOM05D004629 ORTHO05D189049 5.1e-07 57.8 53 52.8


User provided reference genes

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