Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 0.0e+00 1455.3 737 100.0
AT2G07771 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 4.5e-109 399.8 228 91.2
ATMG00900 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 4.5e-109 399.8 228 91.2
A04p09540 Brassica napus HOM05D007194 ORTHO05D009182 4.5e-109 399.8 228 91.2
BolSC28t60320H Brassica oleracea HOM05D007194 ORTHO05D009182 4.5e-109 399.8 228 91.2
BraSC48t46300Z Brassica rapa HOM05D007194 ORTHO05D009182 4.5e-109 399.8 228 91.2
CARHR283160 Cardamine hirsuta HOM05D007194 ORTHO05D009182 2.9e-108 397.1 228 90.4
AL3G44600 Arabidopsis lyrata HOM05D007194 ORTHO05D009182 3.8e-108 396.7 228 90.8
Sp3g25540 Schrenkiella parvula HOM05D007194 ORTHO05D009182 3.8e-108 396.7 228 90.8
Lsat_1_v5_gn_7_100841 Lactuca sativa HOM05D007194 ORTHO05D009182 8.4e-108 395.6 259 80.7
Lsat_1_v5_gn_7_99901 Lactuca sativa HOM05D007194 ORTHO05D009182 8.4e-108 395.6 259 80.7
Aa31csc239G110 Aethionema arabicum HOM05D007194 ORTHO05D009182 1.5e-104 384.8 228 88.6
Cfa021340 Carpinus fangiana HOM05D007194 ORTHO05D009182 3.7e-103 380.2 228 87.7
Sed0021793 Sechium edule HOM05D007194 ORTHO05D009182 1.4e-102 378.3 217 89.9
BolSC28t60390H Brassica oleracea HOM05D007194 ORTHO05D009182 4.1e-102 376.7 189 99.5
BraSC48t46335Z Brassica rapa HOM05D007194 ORTHO05D009182 4.1e-102 376.7 189 99.5
RcHm_v2.0_MTg0498961 Rosa chinensis HOM05D007194 ORTHO05D009182 6.9e-102 375.9 228 86.8
LjContig00315g0023372 Lotus japonicus HOM05D007194 ORTHO05D009182 2.0e-101 374.4 200 95.0
CANSAT16G0047 Cannabis sativa HOM05D007194 ORTHO05D009182 2.6e-101 374.0 228 86.4
Lalb_Chr00c24g0406951 Lupinus albus HOM05D007194 ORTHO05D009182 5.8e-101 372.9 200 94.5
arahy.Tifrunner.gnm1.ann1.14Z8E4 Arachis hypogaea HOM05D007194 ORTHO05D009182 1.0e-100 372.1 200 94.5
arahy.Tifrunner.gnm1.ann1.F9VS0T Arachis hypogaea HOM05D007194 ORTHO05D009182 1.0e-100 372.1 200 94.5
arahy.Tifrunner.gnm1.ann1.SBV1ZL Arachis hypogaea HOM05D007194 ORTHO05D009182 1.0e-100 372.1 200 94.5
Gorai.001G165900 Gossypium raimondii HOM05D007194 ORTHO05D009182 1.3e-100 371.7 228 86.4
Psat0s922g0240 Pisum sativum HOM05D007194 ORTHO05D009182 2.2e-100 370.9 200 94.5
Lalb_Chr17g0337381 Lupinus albus HOM05D007194 ORTHO05D009182 8.4e-100 369.0 200 93.0
HanXRQChr16g0504451 Helianthus annuus HOM05D007194 ORTHO05D009182 1.1e-99 368.6 231 84.4
HanXRQMTg0579111 Helianthus annuus HOM05D007194 ORTHO05D009182 1.1e-99 368.6 231 84.4
DCAR_032453 Daucus carota HOM05D007194 ORTHO05D009182 1.4e-99 368.2 228 86.8
CAN.G1690.2 Capsicum annuum HOM05D007194 ORTHO05D009182 9.3e-99 365.5 228 85.1
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 1.5e-96 358.2 224 84.4
Solyc00g500242.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.5e-96 358.2 232 82.8
Solyc00g500277.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.5e-96 358.2 232 82.8
BolSC28t60422H Brassica oleracea HOM05D007194 ORTHO05D009182 1.9e-96 357.8 189 96.8
Aqoxy3G01137 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 9.7e-96 355.5 291 71.1
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.1e-94 352.1 214 86.4
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 2.4e-94 350.9 287 69.7
SHI36846 Sapria himalayana HOM05D007194 ORTHO05D009182 3.1e-94 350.5 223 83.9
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 5.3e-94 349.7 228 81.1
SGA_v2.0_scaffold400G50840 Striga asiatica HOM05D007194 ORTHO05D009182 6.9e-94 349.4 231 81.4
Lj2P1233T109 Lonicera japonica HOM05D007194 ORTHO05D009182 1.7e-92 344.7 211 86.7
Dinv06723 Davidia involucrata HOM05D007194 ORTHO05D009182 8.5e-92 342.4 211 86.3
CAN.G85.20 Capsicum annuum HOM05D007194 ORTHO05D009182 1.4e-91 341.7 228 81.1
arahy.Tifrunner.gnm1.ann1.GM5VKV Arachis hypogaea HOM05D007194 ORTHO05D009182 5.5e-91 339.7 200 88.5
Nn1g09980 Nelumbo nucifera HOM05D007194 ORTHO05D009182 2.3e-89 334.3 211 84.4
TPR.G39619 Trifolium pratense HOM05D007194 ORTHO05D009182 5.1e-89 333.2 172 95.9
SHI36965 Sapria himalayana HOM05D007194 ORTHO05D009182 2.8e-87 327.4 212 80.2
Lsat_1_v5_gn_1_67041 Lactuca sativa HOM05D007194 ORTHO05D009182 4.8e-87 326.6 210 81.4
AT2G07773 Arabidopsis thaliana HOM05D014754 ORTHO05D017434 8.5e-84 315.8 156 99.4
Lsat_1_v5_gn_5_17681 Lactuca sativa HOM05D007194 ORTHO05D009182 1.9e-83 314.7 239 73.6
Lsat_1_v5_gn_4_20401 Lactuca sativa HOM05D007194 ORTHO05D009182 3.2e-83 313.9 200 80.5
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 1.6e-82 311.6 194 84.0
Sopen00g002730 Solanum pennellii HOM05D007194 ORTHO05D009182 2.7e-82 310.8 178 86.5
Lsat_1_v5_gn_6_37840 Lactuca sativa HOM05D007194 ORTHO05D009182 3.6e-82 310.5 254 68.9
Lj5P380T4 Lonicera japonica HOM05D007194 ORTHO05D009182 1.0e-81 308.9 200 81.5
Prupe.1G175300 Prunus persica HOM05D007194 ORTHO05D009182 1.8e-81 308.1 197 83.2
SalBow1G0339 Salvia bowleyana HOM05D007194 ORTHO05D009182 3.0e-81 307.4 169 92.9
Nitab4.5_0001152g0940 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.1e-80 305.4 189 82.0
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.1e-78 298.9 195 80.0
Sed0000988 Sechium edule HOM05D007194 ORTHO05D009182 2.0e-77 294.7 169 88.8
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.0e-72 278.1 195 77.4
TWI15G0311 Tripterygium wilfordii HOM05D007194 ORTHO05D009182 6.3e-71 273.1 170 83.5
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.8e-70 271.6 248 64.1
Eucgr.I01863 Eucalyptus grandis HOM05D007194 ORTHO05D009182 2.6e-69 267.7 228 67.1
Lj2P1235T102 Lonicera japonica HOM05D007194 ORTHO05D009182 3.0e-65 254.2 167 81.4
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 1.7e-60 238.4 119 97.5
ATMG00910 Arabidopsis thaliana HOM05D014754 ORTHO05D017434 1.9e-59 235.0 117 98.3
ECA039G0021 Erigeron canadensis HOM05D007194 ORTHO05D009182 6.1e-58 229.9 147 81.6
QL93p0053_0961 Quercus lobata HOM05D007194 ORTHO05D009182 8.8e-57 226.1 112 97.3
TAR625G1253 Trochodendron aralioides HOM05D007194 ORTHO05D009182 2.4e-54 218.0 124 90.3
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 5.4e-54 216.9 186 65.1
CARHR283170 Cardamine hirsuta HOM05D014754 ORTHO05D017434 1.9e-51 208.4 111 94.6
EL10Ac8g19071 Beta vulgaris HOM05D007194 ORTHO05D009182 1.2e-50 205.7 141 76.6
HanXRQChr05g0135281 Helianthus annuus HOM05D007194 ORTHO05D009182 1.2e-50 205.7 115 90.4
CAN.G889.9 Capsicum annuum HOM05D007194 ORTHO05D009182 8.6e-44 183.0 107 86.9
Lj1P486T6 Lonicera japonica HOM05D007194 ORTHO05D009182 1.1e-43 182.6 108 85.2
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.1e-43 182.6 128 77.3
Ca_14744_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 3.1e-41 174.5 88 95.5
ATR0693G113 Amborella trichopoda HOM05D007194 ORTHO05D009182 5.2e-41 173.7 98 87.8
BraSC48t46286Z Brassica rapa HOM05D007194 ORTHO05D009182 8.3e-39 166.4 85 100.0
CAN.G1542.2 Capsicum annuum HOM05D007194 ORTHO05D009182 8.3e-39 166.4 114 75.4
unitig_87.g27964 Utricularia gibba HOM05D007194 ORTHO05D009182 4.6e-37 160.6 96 87.5
ClCG10G007880 Citrullus lanatus HOM05D007194 ORTHO05D009182 1.0e-36 159.5 98 86.7
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 8.6e-36 156.4 118 71.2
AT2G07718 Arabidopsis thaliana HOM05D014754 ORTHO05D017434 7.3e-35 153.3 161 53.4
ATMG00590 Arabidopsis thaliana HOM05D014754 ORTHO05D017434 7.3e-35 153.3 161 53.4
CAN.G122.10 Capsicum annuum HOM05D007194 ORTHO05D009182 3.1e-33 147.9 75 94.7
Glyma.19G075000 Glycine max HOM05D007194 ORTHO05D009182 6.8e-33 146.7 73 95.9
CAN.G1001.43 Capsicum annuum HOM05D000927 ORTHO05D000850 8.9e-33 146.4 77 89.6
Nitab4.5_0003083g0040 Nicotiana tabacum HOM05D007194 ORTHO05D008899 2.9e-31 141.4 107 72.9
Gohir.A02G088502 Gossypium hirsutum HOM05D007194 ORTHO05D009182 4.1e-30 137.5 69 92.8
SHI26663 Sapria himalayana HOM05D007194 ORTHO05D009182 1.2e-29 136.0 102 73.5
CAN.G78.2 Capsicum annuum HOM05D007194 ORTHO05D009182 1.6e-29 135.6 68 94.1
Haze_27474 Corylus avellana HOM05D007194 ORTHO05D009182 2.1e-29 135.2 201 39.8
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 3.5e-29 134.4 72 87.5
CAN.G1134.4 Capsicum annuum HOM05D007194 ORTHO05D009182 1.6e-26 125.6 106 66.0
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 8.1e-26 123.2 79 78.5
Manes.06G014501 Manihot esculenta HOM05D007194 ORTHO05D009182 8.9e-25 119.8 65 87.7
Peaxi162Scf00174g01622 Petunia axillaris HOM05D000219 ORTHO05D000226 1.2e-24 119.4 60 95.0
Gohir.A08G085962 Gossypium hirsutum HOM05D007194 ORTHO05D009182 2.9e-23 114.8 167 49.7
Solyc12g035840.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.9e-22 112.1 69 81.2
ATMG00890 Arabidopsis thaliana HOM05D037257 ORTHO05D031448 5.4e-22 110.5 60 96.7
CARHR283150 Cardamine hirsuta HOM05D037257 ORTHO05D031448 1.6e-21 109.0 60 95.0
CARHR287920 Cardamine hirsuta HOM05D037257 ORTHO05D031448 1.6e-21 109.0 60 95.0
BraSC54t46378Z Brassica rapa HOM05D007194 ORTHO05D009182 6.0e-21 107.1 56 96.4
CAN.G950.3 Capsicum annuum HOM05D003517 ORTHO05D028046 1.3e-20 105.9 57 87.7
Nitab4.5_0000859g0090 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.1e-19 102.8 74 75.7
BNapus_Darmor_BZH_scaffold_234p00340 Brassica napus HOM05D003517 ORTHO05D028046 2.5e-19 101.7 63 74.6
Dinv18903 Davidia involucrata HOM05D003517 ORTHO05D009798 1.6e-18 99.0 86 62.8
Nitab4.5_0000172g2130 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.0e-17 94.4 67 68.7
SHI24634 Sapria himalayana HOM05D007194 ORTHO05D009182 5.2e-17 94.0 147 42.9
CAN.G380.6 Capsicum annuum HOM05D007194 ORTHO05D009182 7.1e-14 83.6 55 76.4
CARHR282960 Cardamine hirsuta HOM05D014754 ORTHO05D017434 1.1e-11 76.3 115 40.9
SHI20127 Sapria himalayana HOM05D003517 ORTHO05D028046 3.1e-09 68.2 47 70.2
SHI21961 Sapria himalayana HOM05D007194 ORTHO05D009182 1.2e-08 66.2 45 82.2
SHI49604 Sapria himalayana HOM05D007194 ORTHO05D009182 1.5e-08 65.9 37 89.2
Phvul.007G104600 Phaseolus vulgaris HOM05D007194 ORTHO05D009182 4.4e-08 64.3 46 73.9
PGSC0003DMG400042571 Solanum tuberosum HOM05D007194 ORTHO05D009182 9.9e-08 63.2 44 75.0
Dinv00475 Davidia involucrata HOM05D007194 ORTHO05D009182 2.9e-07 61.6 35 85.7
Lj2P1221T104 Lonicera japonica HOM05D014754 ORTHO05D017434 4.9e-07 60.8 90 42.2


User provided reference genes

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