Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G80650 Arabidopsis thaliana HOM05D000399 ORTHO05D010012 2.7e-91 338.6 165 100.0
AL2G40790 Arabidopsis lyrata HOM05D000399 ORTHO05D010012 6.8e-50 201.1 144 75.7
CARHR073870 Cardamine hirsuta HOM05D000399 ORTHO05D010012 6.0e-38 161.4 158 60.1
Thhalv10019137m.g Eutrema salsugineum HOM05D000399 ORTHO05D010012 1.0e-37 160.6 158 59.5
Carub.0002s2691 Capsella rubella HOM05D000399 ORTHO05D010012 6.6e-37 157.9 168 56.0
Sp5g35110 Schrenkiella parvula HOM05D000399 ORTHO05D010012 8.1e-35 151.0 163 56.4
BcaB05g25237 Brassica carinata HOM05D000399 ORTHO05D010012 8.9e-34 147.5 157 59.2
BcaC03g15940 Brassica carinata HOM05D000399 ORTHO05D010012 1.5e-33 146.7 152 59.9
C02p37020 Brassica napus HOM05D000399 ORTHO05D010012 3.4e-33 145.6 151 59.6
BolC2t09718H Brassica oleracea HOM05D000134 ORTHO05D002396 2.2e-32 142.9 160 56.9
A02p23280 Brassica napus HOM05D000399 ORTHO05D010012 2.9e-32 142.5 152 59.2
BraA02t07324Z Brassica rapa HOM05D000399 ORTHO05D010012 4.2e-31 138.7 160 56.2
Aa31LG4G930 Aethionema arabicum HOM05D000399 ORTHO05D010012 3.3e-28 129.0 153 51.6
THA.LOC104812446 Tarenaya hassleriana HOM05D000399 ORTHO05D010012 3.9e-21 105.5 157 38.2
THA.LOC104813580 Tarenaya hassleriana HOM05D000399 ORTHO05D010012 2.7e-14 82.8 89 46.1
BolC6t40403H Brassica oleracea HOM05D000134 ORTHO05D002396 1.9e-12 76.6 36 80.6
Duzib235G0300 Durio zibethinus HOM05D000399 ORTHO05D010012 1.0e-08 64.3 157 29.9
Ciclev10026528m.g Citrus clementina HOM05D000399 ORTHO05D010012 1.7e-08 63.5 130 33.1
Thecc.06G038100 Theobroma cacao HOM05D000399 ORTHO05D010012 1.7e-08 63.5 160 28.8
Duzib160G0247 Durio zibethinus HOM05D000399 ORTHO05D010012 6.5e-08 61.6 169 28.4
Cpa.g.sc12.176 Carica papaya HOM05D000399 ORTHO05D010012 1.1e-07 60.8 133 34.6
Phvul.005G180800 Phaseolus vulgaris HOM05D000399 ORTHO05D010012 1.1e-07 60.8 142 27.5
Lj3g0003967 Lotus japonicus HOM05D000399 ORTHO05D010012 5.5e-07 58.5 61 49.2
TPR.G19174 Trifolium pratense HOM05D000399 ORTHO05D010012 7.1e-07 58.2 50 48.0
Manes.14G140128 Manihot esculenta HOM05D000399 ORTHO05D000304 9.3e-07 57.8 114 34.2
Psat5g304480 Pisum sativum HOM05D000399 ORTHO05D010012 1.2e-06 57.4 60 43.3
SalBow7G4661 Salvia bowleyana HOM05D000399 ORTHO05D010012 1.6e-06 57.0 36 52.8
Aa31LG7G440 Aethionema arabicum HOM05D000399 ORTHO05D010012 2.1e-06 56.6 38 60.5
Cpa.g.sc10.115 Carica papaya HOM05D000399 ORTHO05D010012 2.1e-06 56.6 40 55.0
COL.COLO4_26655 Corchorus olitorius HOM05D000399 ORTHO05D010012 2.1e-06 56.6 154 26.6
Gohir.A09G091200 Gossypium hirsutum HOM05D000399 ORTHO05D010012 2.1e-06 56.6 155 28.4
VMungo1080G1791 Vigna mungo HOM05D000399 ORTHO05D010012 3.5e-06 55.8 133 26.3
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 4.6e-06 55.5 36 55.6
Hma1.2p1_0135F.1_g061800 Hydrangea macrophylla HOM05D000399 ORTHO05D010012 7.9e-06 54.7 81 34.6
Peaxi162Scf00347g00328 Petunia axillaris HOM05D000399 ORTHO05D000304 7.9e-06 54.7 36 55.6


User provided reference genes

Program Settings