Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G54230 Arabidopsis thaliana HOM05D026857 ORTHO05D026762 5.0e-123 444.5 233 100.0
AL1G62970 Arabidopsis lyrata HOM05D026857 ORTHO05D026762 6.7e-27 125.2 215 39.1
AT1G54240 Arabidopsis thaliana HOM05D026857 ORTHO05D026762 1.4e-24 117.5 218 37.6
Carub.0001s4348 Capsella rubella HOM05D026857 ORTHO05D026762 2.0e-23 113.6 232 35.8
Sp1g40670 Schrenkiella parvula HOM05D001027 ORTHO05D000844 5.2e-11 72.4 221 29.9
CiPaw.04G147800 Carya illinoinensis HOM05D001027 ORTHO05D000844 2.0e-10 70.5 155 34.8
Actinidia39707 Actinidia chinensis HOM05D001027 ORTHO05D000844 4.4e-10 69.3 170 31.2
CiPaw.01G222500 Carya illinoinensis HOM05D001027 ORTHO05D000844 4.4e-10 69.3 156 31.4
Cfa003055 Carpinus fangiana HOM05D001027 ORTHO05D000844 5.7e-10 68.9 145 33.8
BcaB07g33240 Brassica carinata HOM05D020774 ORTHO05D021608 9.7e-10 68.2 161 32.9
Carub.0001s4350 Capsella rubella HOM05D001027 ORTHO05D000844 1.3e-09 67.8 226 28.3
Dinv42342 Davidia involucrata HOM05D001027 ORTHO05D000844 1.3e-09 67.8 157 31.8
CSS0030254 Camellia sinensis var. sinensis HOM05D001027 ORTHO05D000844 1.7e-09 67.4 157 31.8
Haze_25941 Corylus avellana HOM05D001027 ORTHO05D000844 1.7e-09 67.4 145 33.1
Manes.04G141700 Manihot esculenta HOM05D001027 ORTHO05D000844 2.2e-09 67.0 157 31.2
TAR624G1250 Trochodendron aralioides HOM05D001027 ORTHO05D000844 2.2e-09 67.0 158 31.0
QL02p062075 Quercus lobata HOM05D001027 ORTHO05D000844 4.8e-09 65.9 165 32.1
QL05p009530 Quercus lobata HOM05D001027 ORTHO05D000844 4.8e-09 65.9 158 30.4
Duzib235G1421 Durio zibethinus HOM05D001027 ORTHO05D000844 6.3e-09 65.5 156 30.8
TWI36G1153 Tripterygium wilfordii HOM05D001027 ORTHO05D000844 6.3e-09 65.5 174 31.0
GSVIVG01015170001 Vitis vinifera HOM05D001027 ORTHO05D000844 6.3e-09 65.5 158 28.5
Lalb_Chr14g0372681 Lupinus albus HOM05D001027 ORTHO05D000844 8.2e-09 65.1 159 30.8
Potri.018G066300 Populus trichocarpa HOM05D001027 ORTHO05D000844 8.2e-09 65.1 175 27.4
Thecc.06G115200 Theobroma cacao HOM05D001027 ORTHO05D000844 1.1e-08 64.7 173 28.3
Potri.006G147400 Populus trichocarpa HOM05D001027 ORTHO05D000844 1.4e-08 64.3 155 29.7
Ca_23343_v3 Cicer arietinum L. HOM05D001027 ORTHO05D000844 1.8e-08 63.9 152 30.9
AT1G54260 Arabidopsis thaliana HOM05D001027 ORTHO05D000844 2.4e-08 63.5 219 29.7
Ciclev10009173m.g Citrus clementina HOM05D001027 ORTHO05D000844 2.4e-08 63.5 156 30.1
Manes.16G099700 Manihot esculenta HOM05D001027 ORTHO05D000844 3.1e-08 63.2 175 28.0
Gorai.009G143000 Gossypium raimondii HOM05D001027 ORTHO05D000844 4.1e-08 62.8 173 30.1
MD15G1211100 Malus domestica HOM05D001027 ORTHO05D000844 4.1e-08 62.8 141 29.8
Actinidia39094 Actinidia chinensis HOM05D001027 ORTHO05D000844 5.3e-08 62.4 183 28.4
ClCG07G013890 Citrullus lanatus HOM05D001027 ORTHO05D000844 5.3e-08 62.4 160 30.0
Ciclev10026245m.g Citrus clementina HOM05D001027 ORTHO05D000844 5.3e-08 62.4 158 31.0
MELO3C013078.2 Cucumis melo HOM05D001027 ORTHO05D000844 5.3e-08 62.4 161 31.1
Eucgr.C00865 Eucalyptus grandis HOM05D001027 ORTHO05D000844 5.3e-08 62.4 150 30.7
Gohir.A05G136700 Gossypium hirsutum HOM05D001027 ORTHO05D000844 5.3e-08 62.4 173 28.9
Gohir.D05G138700 Gossypium hirsutum HOM05D001027 ORTHO05D000844 5.3e-08 62.4 173 28.9
Hma1.2p1_0672F.1_g200980 Hydrangea macrophylla HOM05D001027 ORTHO05D000844 5.3e-08 62.4 156 28.8
Phvul.010G136100 Phaseolus vulgaris HOM05D001027 ORTHO05D000844 5.3e-08 62.4 164 29.9
Rhsim05G0016500 Rhododendron simsii HOM05D001027 ORTHO05D000844 5.3e-08 62.4 160 32.5
Hund25996 Selenicereus undatus HOM05D001027 ORTHO05D000844 5.3e-08 62.4 153 30.1
Lj5g0001171 Lotus japonicus HOM05D001027 ORTHO05D000844 7.0e-08 62.0 163 28.8
MD02G1083400 Malus domestica HOM05D001027 ORTHO05D000844 9.1e-08 61.6 159 28.3
CSS0035646 Camellia sinensis var. sinensis HOM05D001027 ORTHO05D000844 1.2e-07 61.2 158 29.7
CSS0046266 Camellia sinensis var. sinensis HOM05D001027 ORTHO05D000844 1.2e-07 61.2 158 29.7
THA.LOC104815633 Tarenaya hassleriana HOM05D001027 ORTHO05D000844 1.2e-07 61.2 176 30.7
COL.COLO4_30692 Corchorus olitorius HOM05D001027 ORTHO05D000844 1.6e-07 60.8 173 27.2
THA.LOC104813296 Tarenaya hassleriana HOM05D001027 ORTHO05D000844 2.0e-07 60.5 161 31.7
HanXRQChr12g0354691 Helianthus annuus HOM05D001027 ORTHO05D000844 2.7e-07 60.1 157 29.9
VMungo0331G0967 Vigna mungo HOM05D001027 ORTHO05D000844 2.7e-07 60.1 166 28.9
Cpa.g.sc25.81 Carica papaya HOM05D001027 ORTHO05D000844 3.5e-07 59.7 171 30.4
Prupe.7G205700 Prunus persica HOM05D001027 ORTHO05D000844 3.5e-07 59.7 143 32.9
SalBow1G6362 Salvia bowleyana HOM05D001027 ORTHO05D000844 3.5e-07 59.7 157 29.9
Sed0025250 Sechium edule HOM05D001027 ORTHO05D000844 3.5e-07 59.7 166 29.5
Thecc.09G085000 Theobroma cacao HOM05D001027 ORTHO05D000844 3.5e-07 59.7 153 28.8
Atru.chr7.1631 Acer truncatum HOM05D001027 ORTHO05D000844 4.5e-07 59.3 158 27.2
Actinidia26042 Actinidia chinensis HOM05D001027 ORTHO05D000844 4.5e-07 59.3 158 27.2
CDE06G2372 Ceratophyllum demersum HOM05D001027 ORTHO05D000844 7.7e-07 58.5 159 28.3
Prupe.3G045300 Prunus persica HOM05D001027 ORTHO05D000844 7.7e-07 58.5 164 31.1
COL.COLO4_18172 Corchorus olitorius HOM05D001027 ORTHO05D000844 1.0e-06 58.2 156 28.2
Migut.L01522 Erythranthe guttata HOM05D001027 ORTHO05D000844 1.0e-06 58.2 154 27.9
Sp5g27800 Schrenkiella parvula HOM05D001027 ORTHO05D000844 1.0e-06 58.2 167 31.1
THA.LOC104808049 Tarenaya hassleriana HOM05D001027 ORTHO05D000844 1.0e-06 58.2 176 30.7
Cc06_g11670 Coffea canephora HOM05D001027 ORTHO05D000844 1.3e-06 57.8 156 29.5
ECA234G4183 Erigeron canadensis HOM05D001027 ORTHO05D000844 1.3e-06 57.8 156 28.8
Thhalv10018950m.g Eutrema salsugineum HOM05D001027 ORTHO05D000844 1.3e-06 57.8 164 32.3
Lalb_Chr24g0396531 Lupinus albus HOM05D001027 ORTHO05D000844 1.3e-06 57.8 159 29.6
TWI32G0968 Tripterygium wilfordii HOM05D001027 ORTHO05D000844 1.3e-06 57.8 157 26.8
Zm00001eb361200 Zea mays HOM05D001027 ORTHO05D000844 1.3e-06 57.8 172 30.8
PGR119G1880 Punica granatum HOM05D001027 ORTHO05D000844 2.9e-06 56.6 165 30.9
Glyma.08G189900 Glycine max HOM05D001027 ORTHO05D000844 3.8e-06 56.2 163 29.4
Psat5g289920 Pisum sativum HOM05D001027 ORTHO05D000844 3.8e-06 56.2 160 30.0
PGR142G1838 Punica granatum HOM05D001027 ORTHO05D000844 3.8e-06 56.2 192 29.2
TPR.G6579 Trifolium pratense HOM05D001027 ORTHO05D000844 3.8e-06 56.2 157 29.9
Atru.chr1.3799 Acer truncatum HOM05D001027 ORTHO05D006918 5.0e-06 55.8 149 29.5
Duzib150G0469 Durio zibethinus HOM05D001027 ORTHO05D000844 5.0e-06 55.8 147 32.0
Lj3g0001508 Lotus japonicus HOM05D001027 ORTHO05D000844 6.5e-06 55.5 165 27.9
Cfa003557 Carpinus fangiana HOM05D001027 ORTHO05D000844 8.5e-06 55.1 158 25.9
Ca_01220_v3 Cicer arietinum L. HOM05D001027 ORTHO05D000844 8.5e-06 55.1 156 28.8
Peaxi162Scf00494g00102 Petunia axillaris HOM05D001027 ORTHO05D000844 8.5e-06 55.1 174 26.4


User provided reference genes

Program Settings