Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G50780 Arabidopsis thaliana HOM05D010067 ORTHO05D012286 2.6e-170 602.1 324 100.0
AT1G48150 Arabidopsis thaliana HOM05D010067 ORTHO05D012286 3.1e-99 365.9 267 80.9
AL5G21870 Arabidopsis lyrata HOM05D010067 ORTHO05D012286 1.9e-83 313.5 278 69.8
AL5G21590 Arabidopsis lyrata HOM05D010067 ORTHO05D012286 1.3e-81 307.4 277 68.2
AT5G27130 Arabidopsis thaliana HOM05D010067 ORTHO05D012286 4.6e-42 176.0 292 43.5
Carub.0005s0962 Capsella rubella HOM05D010067 ORTHO05D012286 1.0e-41 174.9 267 47.6
BraA02t08829Z Brassica rapa HOM05D010067 ORTHO05D012286 1.4e-38 164.5 258 43.0
A02p38510 Brassica napus HOM05D010067 ORTHO05D012286 6.9e-38 162.2 258 42.2
Thhalv10015516m.g Eutrema salsugineum HOM05D010067 ORTHO05D012286 3.2e-35 153.3 255 41.6
AL4G20910 Arabidopsis lyrata HOM05D010067 ORTHO05D012286 9.3e-35 151.8 306 39.9
BcaC03g17772 Brassica carinata HOM05D010067 ORTHO05D012286 1.2e-34 151.4 258 40.3
BolC2t11856H Brassica oleracea HOM05D010067 ORTHO05D012286 2.1e-34 150.6 258 39.9
C02p57880 Brassica napus HOM05D010067 ORTHO05D012286 3.5e-34 149.8 258 39.9
Carub.0006s2537 Capsella rubella HOM05D010067 ORTHO05D012286 1.8e-33 147.5 131 58.8
Aa31LG3G4360 Aethionema arabicum HOM05D010067 ORTHO05D012286 1.2e-10 71.6 98 40.8
Aa31LG3G18740 Aethionema arabicum HOM05D010067 ORTHO05D012286 2.7e-10 70.5 107 42.1
Aa31LG3G4370 Aethionema arabicum HOM05D010067 ORTHO05D012286 2.7e-10 70.5 87 40.2
Aa31LG3G4380 Aethionema arabicum HOM05D010067 ORTHO05D012286 6.1e-10 69.3 91 40.7
Aa31LG4G13670 Aethionema arabicum HOM05D010067 ORTHO05D012286 1.5e-08 64.7 85 41.2
Aa31LG4G13760 Aethionema arabicum HOM05D010067 ORTHO05D012286 3.3e-08 63.5 85 40.0
Aa31sc24G40 Aethionema arabicum HOM05D010067 ORTHO05D012286 7.4e-08 62.4 86 43.0
AT3G43600 Arabidopsis thaliana HOM05D001013 ORTHO05D001703 3.7e-07 60.1 27 100.0
Sp5g17560 Schrenkiella parvula HOM05D001013 ORTHO05D001703 3.7e-07 60.1 27 100.0
Carub.0005s0932 Capsella rubella HOM05D001013 ORTHO05D001703 6.3e-07 59.3 31 87.1
BcaC01g02216 Brassica carinata HOM05D001013 ORTHO05D001703 1.4e-06 58.2 27 96.3
A06p26650 Brassica napus HOM05D001013 ORTHO05D001703 1.4e-06 58.2 27 96.3
BolSC21t60234H Brassica oleracea HOM05D001013 ORTHO05D001703 1.4e-06 58.2 27 96.3
BraA06t25599Z Brassica rapa HOM05D001013 ORTHO05D001703 1.4e-06 58.2 27 96.3
Thhalv10002309m.g Eutrema salsugineum HOM05D001013 ORTHO05D001703 1.4e-06 58.2 27 96.3
THA.LOC104799593 Tarenaya hassleriana HOM05D001013 ORTHO05D001703 1.4e-06 58.2 44 68.2
BcaB01g01220 Brassica carinata HOM05D001013 ORTHO05D001703 3.1e-06 57.0 27 92.6
ClCG02G024320 Citrullus lanatus HOM05D001013 ORTHO05D001703 3.1e-06 57.0 28 89.3
Thecc.09G266500 Theobroma cacao HOM05D001013 ORTHO05D001703 3.1e-06 57.0 27 92.6
Thecc.09G266600 Theobroma cacao HOM05D001013 ORTHO05D001703 3.1e-06 57.0 54 53.7
Atru.chr3.3024 Acer truncatum HOM05D001013 ORTHO05D001703 4.1e-06 56.6 27 92.6
Atru.chr3.3025 Acer truncatum HOM05D001013 ORTHO05D001703 4.1e-06 56.6 27 92.6
BcaC01g02093 Brassica carinata HOM05D001013 ORTHO05D001703 4.1e-06 56.6 27 92.6
A06p22420 Brassica napus HOM05D001013 ORTHO05D001703 4.1e-06 56.6 27 92.6
C03p68600 Brassica napus HOM05D001013 ORTHO05D001703 4.1e-06 56.6 27 92.6
BolC3t19119H Brassica oleracea HOM05D001013 ORTHO05D001703 4.1e-06 56.6 27 92.6
BraA06t25325Z Brassica rapa HOM05D001013 ORTHO05D001703 4.1e-06 56.6 27 92.6
TWI75G0994 Tripterygium wilfordii HOM05D001013 ORTHO05D001703 4.1e-06 56.6 27 92.6
TWI75G1069 Tripterygium wilfordii HOM05D001013 ORTHO05D001703 4.1e-06 56.6 27 92.6
AL5G21530 Arabidopsis lyrata HOM05D001013 ORTHO05D001703 7.0e-06 55.8 27 92.6
CARHR287370 Cardamine hirsuta HOM05D001013 ORTHO05D001703 7.0e-06 55.8 27 92.6
CsaV3_4G017450 Cucumis sativus L. HOM05D001013 ORTHO05D001703 7.0e-06 55.8 52 59.6
Thhalv10002813m.g Eutrema salsugineum HOM05D001013 ORTHO05D001703 7.0e-06 55.8 27 92.6
Cc00_g06140 Coffea canephora HOM05D001013 ORTHO05D001703 9.1e-06 55.5 27 88.9


User provided reference genes

Program Settings