Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G45233 Arabidopsis thaliana HOM05D004452 ORTHO05D005358 5.1e-249 864.0 453 100.0
AL1G52910 Arabidopsis lyrata HOM05D004452 ORTHO05D005358 7.5e-224 780.4 454 89.2
Carub.0001s3568 Capsella rubella HOM05D004452 ORTHO05D005358 3.4e-216 755.0 452 87.6
Sp1g34090 Schrenkiella parvula HOM05D004452 ORTHO05D005358 1.2e-194 683.3 446 81.2
CARHR036370 Cardamine hirsuta HOM05D004452 ORTHO05D005358 8.9e-193 677.2 455 81.3
Thhalv10011479m.g Eutrema salsugineum HOM05D004452 ORTHO05D005358 4.9e-191 671.4 450 79.6
BraA10t42942Z Brassica rapa HOM05D004452 ORTHO05D005358 5.6e-179 631.3 447 75.4
A10p06900 Brassica napus HOM05D004452 ORTHO05D005358 4.0e-177 625.2 447 74.3
BolC6t35279H Brassica oleracea HOM05D004452 ORTHO05D005358 1.5e-176 623.2 446 74.0
BcaC08g42910 Brassica carinata HOM05D004452 ORTHO05D005358 4.9e-175 618.2 448 73.7
C06p01470 Brassica napus HOM05D004452 ORTHO05D005358 8.4e-175 617.5 448 73.7
THA.LOC104822853 Tarenaya hassleriana HOM05D004452 ORTHO05D005358 2.9e-167 592.4 470 68.1
AL8G17930 Arabidopsis lyrata HOM05D004452 ORTHO05D005358 1.1e-161 573.9 458 67.0
Aa31sc108G100 Aethionema arabicum HOM05D004452 ORTHO05D005358 3.1e-161 572.4 469 68.9
Thhalv10003147m.g Eutrema salsugineum HOM05D004452 ORTHO05D005358 9.0e-161 570.9 473 65.8
BcaC06g31738 Brassica carinata HOM05D004452 ORTHO05D005358 2.2e-159 566.2 473 65.5
Carub.0008s0587 Capsella rubella HOM05D004452 ORTHO05D005358 4.9e-159 565.1 458 65.7
AT5G42920 Arabidopsis thaliana HOM05D004452 ORTHO05D005358 2.4e-158 562.8 458 67.0
BcaB07g33871 Brassica carinata HOM05D004452 ORTHO05D005358 4.2e-158 562.0 450 68.4
CARHR181170 Cardamine hirsuta HOM05D004452 ORTHO05D005358 4.2e-158 562.0 459 65.8
Sp2g07660 Schrenkiella parvula HOM05D004452 ORTHO05D005358 9.3e-158 560.8 473 64.9
Aa31LG9G12980 Aethionema arabicum HOM05D004452 ORTHO05D005358 6.0e-157 558.1 474 65.2
Cfa018088 Carpinus fangiana HOM05D004452 ORTHO05D005358 1.9e-155 553.1 460 64.1
BcaC02g10792 Brassica carinata HOM05D004452 ORTHO05D005358 1.6e-154 550.1 476 64.9
C04p25060 Brassica napus HOM05D004452 ORTHO05D005358 1.6e-154 550.1 476 64.9
BolC4t24007H Brassica oleracea HOM05D004452 ORTHO05D005358 1.6e-154 550.1 476 64.9
Gohir.A05G203100 Gossypium hirsutum HOM05D004452 ORTHO05D005358 1.1e-153 547.4 458 63.8
THA.LOC104812571 Tarenaya hassleriana HOM05D004452 ORTHO05D005358 3.1e-153 545.8 473 62.6
Prupe.1G434400 Prunus persica HOM05D004452 ORTHO05D005358 9.0e-153 544.3 469 62.0
CiPaw.15G055600 Carya illinoinensis HOM05D004452 ORTHO05D005358 1.5e-152 543.5 460 63.9
A06p48170 Brassica napus HOM05D004452 ORTHO05D005358 5.8e-152 541.6 460 65.2
COL.COLO4_26520 Corchorus olitorius HOM05D004452 ORTHO05D005358 7.6e-152 541.2 456 63.6
Thecc.08G005800 Theobroma cacao HOM05D004452 ORTHO05D005358 7.6e-152 541.2 459 63.4
Actinidia23285 Actinidia chinensis HOM05D004452 ORTHO05D005358 6.5e-151 538.1 459 62.7
CSS0026728 Camellia sinensis var. sinensis HOM05D004452 ORTHO05D005358 6.5e-151 538.1 461 62.9
Manes.18G038000 Manihot esculenta HOM05D004452 ORTHO05D005358 6.5e-151 538.1 473 61.1
BraA06t27686Z Brassica rapa HOM05D004452 ORTHO05D005358 8.4e-151 537.7 460 64.8
Duzib093G1704 Durio zibethinus HOM05D004452 ORTHO05D005358 8.4e-151 537.7 458 63.8
QL02p004676 Quercus lobata HOM05D004452 ORTHO05D005358 1.4e-150 537.0 459 63.2
TAR381G1434 Trochodendron aralioides HOM05D004452 ORTHO05D005358 1.9e-150 536.6 459 62.7
RcHm_v2.0_Chr6g0308041 Rosa chinensis HOM05D004452 ORTHO05D005358 3.2e-150 535.8 460 62.8
Dinv35952 Davidia involucrata HOM05D004452 ORTHO05D005358 5.5e-150 535.0 452 63.3
Ciclev10000290m.g Citrus clementina HOM05D004452 ORTHO05D005358 7.1e-150 534.6 458 62.2
MD15G1081700 Malus domestica HOM05D004452 ORTHO05D005358 9.3e-150 534.3 458 61.8
FvH4_2g34320 Fragaria vesca HOM05D004452 ORTHO05D005358 7.9e-149 531.2 460 62.0
FAN15G1326 Fragaria x ananassa HOM05D004452 ORTHO05D005358 1.3e-148 530.4 460 62.4
FAN20G1510 Fragaria x ananassa HOM05D004452 ORTHO05D005358 1.8e-148 530.0 460 62.6
FAN27G2914 Fragaria x ananassa HOM05D004452 ORTHO05D005358 8.7e-148 527.7 460 62.2
Potri.014G028100 Populus trichocarpa HOM05D004452 ORTHO05D005358 2.5e-147 526.2 476 60.5
GSVIVG01009484001 Vitis vinifera HOM05D004452 ORTHO05D005358 1.3e-146 523.9 446 63.2
Rhsim06G0050800 Rhododendron simsii HOM05D004452 ORTHO05D005358 2.2e-146 523.1 471 59.7
Sabra14G0019200 Salix brachista HOM05D004452 ORTHO05D005358 3.7e-146 522.3 476 60.1
Dinv39307 Davidia involucrata HOM05D004452 ORTHO05D005358 1.8e-145 520.0 470 59.8
Lj4A59T44 Lonicera japonica HOM05D004452 ORTHO05D005358 3.1e-145 519.2 469 60.8
TWI56G0235 Tripterygium wilfordii HOM05D004452 ORTHO05D005358 3.1e-145 519.2 459 61.4
Glyma.06G040600 Glycine max HOM05D004452 ORTHO05D005358 6.9e-145 518.1 458 61.4
Cc10_g04060 Coffea canephora HOM05D004452 ORTHO05D005358 9.0e-145 517.7 454 61.2
CiPaw.16G042900 Carya illinoinensis HOM05D004452 ORTHO05D005358 1.2e-144 517.3 459 61.2
ClCG05G019920 Citrullus lanatus HOM05D004452 ORTHO05D005358 1.2e-144 517.3 461 59.9
vmacro21515 Vaccinium macrocarpon HOM05D004452 ORTHO05D005358 1.2e-144 517.3 459 59.7
Cpa.g.sc49.27 Carica papaya HOM05D004452 ORTHO05D005358 1.5e-144 516.9 453 62.3
MELO3C016756.2 Cucumis melo HOM05D004452 ORTHO05D005358 2.0e-144 516.5 461 59.9
Gohir.D05G206300 Gossypium hirsutum HOM05D004452 ORTHO05D005358 2.6e-144 516.2 427 65.1
PGR031G1897 Punica granatum HOM05D004452 ORTHO05D005358 1.3e-143 513.8 459 61.4
TWI36G0852 Tripterygium wilfordii HOM05D004452 ORTHO05D005358 1.3e-143 513.8 460 60.7
Lalb_Chr11g0062611 Lupinus albus HOM05D004452 ORTHO05D005358 2.2e-143 513.1 475 59.8
CAN.G1030.10 Capsicum annuum HOM05D004452 ORTHO05D005358 3.8e-143 512.3 461 59.9
Glyma.04G039400 Glycine max HOM05D004452 ORTHO05D005358 3.8e-143 512.3 458 60.3
Gorai.009G212700 Gossypium raimondii HOM05D004452 ORTHO05D005358 5.0e-143 511.9 427 64.9
PGSC0003DMG400007967 Solanum tuberosum HOM05D004452 ORTHO05D005358 6.5e-143 511.5 461 61.2
FAN24G0195 Fragaria x ananassa HOM05D004452 ORTHO05D005358 1.1e-142 510.8 509 56.2
Eucgr.F02336 Eucalyptus grandis HOM05D004452 ORTHO05D005358 1.4e-142 510.4 461 61.0
MBI06_g02568_MAGBIO Magnolia biondii HOM05D004452 ORTHO05D005358 1.9e-142 510.0 460 60.0
Nn5g30286 Nelumbo nucifera HOM05D004452 ORTHO05D005358 2.5e-142 509.6 463 59.4
CANSAT11G1000 Cannabis sativa HOM05D004452 ORTHO05D005358 4.2e-142 508.8 473 59.4
Atru.chr13.704 Acer truncatum HOM05D004452 ORTHO05D005358 7.2e-142 508.1 469 59.1
CsaV3_4G034360 Cucumis sativus L. HOM05D004452 ORTHO05D005358 7.2e-142 508.1 461 59.0
Ca_15944_v3 Cicer arietinum L. HOM05D004452 ORTHO05D005358 1.2e-141 507.3 458 59.6
TPR.G24198 Trifolium pratense HOM05D004452 ORTHO05D005358 1.2e-141 507.3 455 60.0
PSO170G2588 Papaver somniferum HOM05D004452 ORTHO05D005358 2.1e-141 506.5 463 59.4
arahy.Tifrunner.gnm1.ann1.Y5ZCTQ Arachis hypogaea HOM05D004452 ORTHO05D005358 3.6e-141 505.8 464 59.1
Lj1g0004160 Lotus japonicus HOM05D004452 ORTHO05D005358 3.6e-141 505.8 457 59.5
PSO210G0441 Papaver somniferum HOM05D004452 ORTHO05D005358 4.6e-141 505.4 463 59.4
Solyc04g078830.3 Solanum lycopersicum HOM05D004452 ORTHO05D005358 4.6e-141 505.4 461 61.0
AUR62041892 Chenopodium quinoa HOM05D004452 ORTHO05D005358 1.8e-140 503.4 459 58.4
Psat5g042600 Pisum sativum HOM05D004452 ORTHO05D005358 1.8e-140 503.4 458 58.5
arahy.Tifrunner.gnm1.ann1.UAD7VL Arachis hypogaea HOM05D004452 ORTHO05D005358 2.3e-140 503.1 464 58.8
Nitab4.5_0002760g0030 Nicotiana tabacum HOM05D004452 ORTHO05D005358 2.3e-140 503.1 460 60.4
Lsat_1_v5_gn_1_21181 Lactuca sativa HOM05D004452 ORTHO05D005358 1.1e-139 500.7 465 59.1
Nitab4.5_0000287g0200 Nicotiana tabacum HOM05D004452 ORTHO05D005358 1.9e-139 500.0 460 60.9
Medtr3g101790 Medicago truncatula HOM05D004452 ORTHO05D005358 3.3e-139 499.2 457 58.4
Aqoxy5G01224 Aquilegia oxysepala HOM05D004452 ORTHO05D005358 7.4e-139 498.0 462 58.4
Sc15g0006090 Simmondsia chinensis HOM05D004452 ORTHO05D005358 9.7e-139 497.7 468 58.3
Hund23866 Selenicereus undatus HOM05D004452 ORTHO05D005358 1.7e-138 496.9 462 57.6
Phvul.009G065600 Phaseolus vulgaris HOM05D004452 ORTHO05D005358 2.2e-138 496.5 458 58.3
Sed0009272 Sechium edule HOM05D004452 ORTHO05D005358 4.8e-138 495.4 457 58.0
VMungo1309G1308 Vigna mungo HOM05D004452 ORTHO05D005358 6.3e-138 495.0 458 58.3
DCAR_019448 Daucus carota HOM05D004452 ORTHO05D005358 1.5e-136 490.3 452 59.5
Oeu043579.4 Olea europaea HOM05D004452 ORTHO05D005358 2.6e-136 489.6 454 58.1
EL10Ac1g01836 Beta vulgaris HOM05D004452 ORTHO05D005358 3.4e-136 489.2 459 57.7
CDE08G0013 Ceratophyllum demersum HOM05D004452 ORTHO05D005358 5.9e-136 488.4 452 57.3
CANSAT11G0118 Cannabis sativa HOM05D004452 ORTHO05D005358 3.8e-135 485.7 466 57.9
Migut.N02714 Erythranthe guttata HOM05D004452 ORTHO05D005358 1.1e-134 484.2 454 57.7
MSTRG.24335 Avicennia marina HOM05D004452 ORTHO05D005358 3.2e-134 482.6 456 57.7
HanXRQChr02g0039511 Helianthus annuus HOM05D004452 ORTHO05D005358 7.2e-134 481.5 463 58.1
SGA_v2.0_scaffold28G11777 Striga asiatica HOM05D004452 ORTHO05D005358 1.2e-133 480.7 454 57.7
ECA247G0253 Erigeron canadensis HOM05D004452 ORTHO05D005358 3.6e-133 479.2 468 57.1
Lalb_Chr08g0245391 Lupinus albus HOM05D004452 ORTHO05D005358 7.9e-133 478.0 463 57.9
arahy.Tifrunner.gnm1.ann1.IXK305 Arachis hypogaea HOM05D004452 ORTHO05D005358 3.0e-132 476.1 459 56.0
arahy.Tifrunner.gnm1.ann1.VB8FSW Arachis hypogaea HOM05D004452 ORTHO05D005358 3.0e-132 476.1 459 56.0
Peaxi162Scf00252g00221 Petunia axillaris HOM05D004452 ORTHO05D005358 1.7e-130 470.3 459 57.1
Phvul.001G022500 Phaseolus vulgaris HOM05D004452 ORTHO05D005358 2.4e-129 466.5 463 55.7
Sc02g0007190 Simmondsia chinensis HOM05D004452 ORTHO05D005358 2.4e-129 466.5 471 54.1
Glyma.14G083300 Glycine max HOM05D004452 ORTHO05D005358 2.6e-128 463.0 464 57.1
Glyma.17G241800 Glycine max HOM05D004452 ORTHO05D005358 3.4e-128 462.6 463 56.2
ATR1126G044 Amborella trichopoda HOM05D004452 ORTHO05D005358 3.8e-127 459.1 473 54.3
Oeu023860.1 Olea europaea HOM05D004452 ORTHO05D005358 2.5e-126 456.4 462 54.1
Os02g0767100 Oryza sativa ssp. japonica HOM05D004452 ORTHO05D005358 1.0e-124 451.1 464 54.5
VMungo0647G1811 Vigna mungo HOM05D004452 ORTHO05D005358 3.3e-123 446.0 461 54.2
Hma1.2p1_2046F.1_g312410 Hydrangea macrophylla HOM05D004452 ORTHO05D005358 4.4e-123 445.7 491 53.8
Zm00001eb255990 Zea mays HOM05D004452 ORTHO05D005358 1.3e-122 444.1 460 53.3
CDE04G2017 Ceratophyllum demersum HOM05D004452 ORTHO05D005358 4.8e-122 442.2 408 58.1
SHI08268 Sapria himalayana HOM05D004452 ORTHO05D005358 5.3e-121 438.7 470 52.8
Mapoly0012s0112 Marchantia polymorpha HOM05D004452 ORTHO05D005358 1.1e-110 404.4 463 50.3
MSTRG.25087 Avicennia marina HOM05D004452 ORTHO05D005358 2.3e-108 396.7 403 54.3
Sed0026470 Sechium edule HOM05D004452 ORTHO05D005358 4.0e-108 396.0 460 48.9
AagrBONN_evm.TU.Sc2ySwM_228.4151 Anthoceros agrestis HOM05D004452 ORTHO05D005358 2.7e-96 356.7 443 44.9
unitig_26.g10021 Utricularia gibba HOM05D002518 ORTHO05D002630 1.7e-95 354.0 454 45.6
Nn7g37344 Nelumbo nucifera HOM05D004452 ORTHO05D005358 5.0e-87 325.9 296 58.4
Pp3c7_25670 Physcomitrium patens HOM05D004452 ORTHO05D005358 1.4e-84 317.8 473 41.6
unitig_749.g13678 Utricularia gibba HOM05D004452 ORTHO05D005358 2.0e-83 313.9 409 44.5
SalBow8G0374 Salvia bowleyana HOM05D004452 ORTHO05D005358 8.3e-82 308.5 315 55.2
SalBow8G3632 Salvia bowleyana HOM05D004452 ORTHO05D005358 8.3e-82 308.5 315 55.2
SMO356G0003 Selaginella moellendorffii HOM05D004452 ORTHO05D005358 1.2e-80 304.7 373 46.4
AagrBONN_evm.TU.Sc2ySwM_117.2784 Anthoceros agrestis HOM05D004452 ORTHO05D005358 3.9e-79 299.7 440 40.0
SEGI_30975 Sequoiadendron giganteum HOM05D004452 ORTHO05D005358 4.4e-75 286.2 311 52.4
TAR625G1031 Trochodendron aralioides HOM05D004452 ORTHO05D005358 9.9e-75 285.0 260 60.0
HPP92_016717 Vanilla planifolia HOM05D004452 ORTHO05D005358 3.1e-68 263.5 401 39.4
MD08G1099200 Malus domestica HOM05D004452 ORTHO05D005358 1.1e-65 255.0 196 67.9
Nn3g17073 Nelumbo nucifera HOM05D004452 ORTHO05D005358 2.7e-64 250.4 235 60.9
Potri.002G125300 Populus trichocarpa HOM05D004452 ORTHO05D005358 4.6e-56 223.0 316 47.2
Sopen04g032430 Solanum pennellii HOM05D004452 ORTHO05D005358 3.1e-52 210.3 235 51.1
CBR_g24409 Chara braunii HOM05D004452 ORTHO05D005358 3.8e-50 203.4 359 35.9
AUR62038817 Chenopodium quinoa HOM05D004452 ORTHO05D005358 1.6e-48 198.0 176 55.7
SalBow8G2832 Salvia bowleyana HOM05D004452 ORTHO05D005358 1.8e-44 184.5 143 62.2
SalBow8G5418 Salvia bowleyana HOM05D004452 ORTHO05D005358 1.8e-44 184.5 143 62.2
MCO13G423 Micromonas commoda HOM05D004452 ORTHO05D005358 3.1e-44 183.7 448 32.4
MD08G1099300 Malus domestica HOM05D004452 ORTHO05D005358 1.1e-36 158.7 146 56.8
Cre17.g705550 Chlamydomonas reinhardtii HOM05D004452 ORTHO05D005358 1.5e-35 154.8 403 28.5
Aa31LG7G10550 Aethionema arabicum HOM05D004452 ORTHO05D005358 8.2e-29 132.5 92 67.4
Aa31LG7G10540 Aethionema arabicum HOM05D004452 ORTHO05D005358 1.8e-23 114.8 98 68.4
CARHR174670 Cardamine hirsuta HOM05D004452 ORTHO05D005358 1.5e-14 85.1 58 70.7
Actinidia22636 Actinidia chinensis HOM05D004452 ORTHO05D005358 8.8e-07 59.3 57 57.9


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