Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 9.0e-201 703.4 352 100.0
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 2.8e-194 681.8 352 97.2
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 5.9e-184 647.5 356 91.9
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 1.0e-183 646.7 351 91.7
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 3.2e-182 641.7 354 92.1
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 2.1e-181 639.0 351 91.2
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 7.9e-181 637.1 352 90.9
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 2.6e-179 632.1 350 89.7
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 9.7e-179 630.2 351 89.5
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 6.3e-178 627.5 351 89.5
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 8.2e-178 627.1 351 89.2
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 3.1e-177 625.2 351 88.9
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 2.5e-166 589.0 355 85.1
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 3.1e-161 572.0 362 79.8
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 3.0e-156 555.4 394 73.6
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 6.4e-146 521.2 356 77.2
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 2.4e-145 519.2 329 77.2
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.0e-144 516.2 346 74.0
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 7.8e-144 514.2 346 73.7
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.3e-140 502.7 348 71.3
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 3.1e-140 502.3 319 75.5
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 1.2e-139 500.4 369 69.6
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 2.6e-139 499.2 383 68.1
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.7e-138 496.5 345 71.0
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 2.2e-138 496.1 330 74.5
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 2.2e-138 496.1 336 72.6
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 4.9e-138 495.0 319 74.3
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 8.3e-138 494.2 317 75.4
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 8.3e-138 494.2 317 75.4
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.4e-137 493.4 349 68.5
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 1.9e-137 493.0 347 71.2
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 2.4e-137 492.7 319 74.9
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 3.2e-137 492.3 317 75.1
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 3.2e-137 492.3 319 74.9
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 3.2e-137 492.3 319 74.9
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 4.1e-137 491.9 321 73.2
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 1.0e-135 487.3 318 73.3
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 1.3e-135 486.9 319 74.0
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.3e-135 486.9 350 69.7
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 1.3e-135 486.9 350 68.6
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 1.7e-135 486.5 318 74.2
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.7e-135 486.5 319 73.7
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 3.9e-135 485.3 324 73.1
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 3.9e-135 485.3 330 70.9
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 5.0e-135 485.0 350 67.4
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 5.0e-135 485.0 319 73.4
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 5.0e-135 485.0 319 73.0
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 6.6e-135 484.6 318 73.6
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 1.1e-134 483.8 345 69.6
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.1e-134 483.8 319 73.4
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 1.5e-134 483.4 345 70.1
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 1.9e-134 483.0 330 71.8
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 4.3e-134 481.9 347 70.9
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 5.6e-134 481.5 319 73.0
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 7.3e-134 481.1 328 72.3
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 1.6e-133 479.9 319 72.7
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.6e-133 479.9 319 72.7
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 2.8e-133 479.2 323 72.1
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 3.6e-133 478.8 376 66.0
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 4.7e-133 478.4 318 73.9
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 6.2e-133 478.0 325 72.0
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 6.2e-133 478.0 322 71.7
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.4e-132 476.9 332 70.5
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 2.3e-132 476.1 359 66.3
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 3.1e-132 475.7 346 68.2
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 4.0e-132 475.3 321 73.2
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 6.8e-132 474.6 352 67.9
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 6.8e-132 474.6 318 72.6
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 8.9e-132 474.2 320 71.6
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 8.9e-132 474.2 350 67.4
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 5.8e-131 471.5 319 71.5
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 1.7e-130 469.9 319 71.2
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 2.9e-130 469.2 364 65.1
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 3.7e-130 468.8 306 72.2
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 4.9e-130 468.4 355 67.3
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 6.4e-130 468.0 349 66.5
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 8.3e-130 467.6 331 71.3
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 8.3e-130 467.6 304 74.0
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 8.3e-130 467.6 321 71.3
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 1.4e-129 466.8 317 73.5
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.4e-129 466.8 321 70.7
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 2.4e-129 466.1 357 65.0
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 2.4e-129 466.1 321 71.3
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 3.2e-129 465.7 324 69.1
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.2e-129 465.7 320 70.3
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 7.1e-129 464.5 321 71.3
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 9.2e-129 464.2 359 66.3
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 9.2e-129 464.2 355 65.9
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 9.2e-129 464.2 320 70.6
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 2.1e-128 463.0 320 70.3
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 2.7e-128 462.6 345 66.4
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 3.5e-128 462.2 318 70.1
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 4.6e-128 461.8 320 70.6
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 6.0e-128 461.5 339 69.0
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 7.8e-128 461.1 321 70.1
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 1.3e-127 460.3 305 73.1
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 1.3e-127 460.3 356 66.0
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 2.3e-127 459.5 320 69.7
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 3.0e-127 459.1 301 74.1
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 3.0e-127 459.1 322 70.5
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 6.6e-127 458.0 345 66.7
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 6.6e-127 458.0 329 68.4
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 8.6e-127 457.6 318 71.1
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 1.1e-126 457.2 336 68.8
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 1.9e-126 456.4 361 64.0
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 1.2e-125 453.8 327 69.4
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 3.6e-125 452.2 349 65.0
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 4.7e-125 451.8 338 66.0
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 6.2e-125 451.4 319 68.7
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.4e-124 450.3 322 67.7
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 1.8e-124 449.9 345 64.9
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 9.9e-123 444.1 327 67.6
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 2.9e-122 442.6 307 70.0
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 4.9e-122 441.8 319 68.3
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 4.9e-122 441.8 334 65.9
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.2e-121 439.1 325 66.5
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 3.2e-121 439.1 318 67.9
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 3.2e-121 439.1 328 67.1
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 7.8e-120 434.5 376 59.8
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 3.9e-119 432.2 324 65.4
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 5.6e-118 428.3 338 63.9
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 1.6e-117 426.8 324 64.8
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 9.3e-113 411.0 325 62.2
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.6e-112 410.2 318 65.1
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 3.9e-111 405.6 534 44.9
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 1.5e-110 403.7 260 75.0
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 1.3e-109 400.6 317 62.5
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 9.9e-107 391.0 250 74.4
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 5.4e-105 385.2 263 72.6
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 3.3e-102 375.9 262 70.2
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 2.0e-99 366.7 321 58.3
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 7.4e-94 348.2 330 54.5
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 7.6e-91 338.2 276 64.1
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.7e-90 337.0 231 68.8
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 2.2e-90 336.7 316 53.5
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 4.9e-90 335.5 206 76.7
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 1.9e-89 333.6 223 73.1
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 1.8e-84 317.0 288 55.6
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 2.4e-84 316.6 267 61.8
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.5e-83 313.9 216 69.0
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 1.3e-82 310.8 199 76.9
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 9.3e-81 304.7 220 69.1
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 2.5e-73 280.0 163 83.4
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 1.1e-68 264.6 372 42.5
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 7.9e-64 248.4 163 71.2
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 8.2e-61 238.4 171 67.8
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 1.6e-59 234.2 159 73.6
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 1.7e-58 230.7 208 61.1
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.1e-57 228.0 161 73.3
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 1.4e-52 211.1 164 61.6
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 1.8e-47 194.1 253 43.1
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 1.8e-47 194.1 331 39.3
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 2.0e-43 180.6 119 68.1
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 2.2e-42 177.2 189 51.9
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 2.1e-32 144.1 110 70.0
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 8.0e-32 142.1 332 32.5
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 3.2e-28 130.2 382 30.6
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 2.7e-27 127.1 109 54.1
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 2.3e-26 124.0 252 32.1
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 1.8e-23 114.4 65 81.5
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 2.0e-22 110.9 128 48.4
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 3.0e-18 97.1 91 52.7
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.5e-17 94.7 56 82.1
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 6.2e-16 89.4 57 71.9
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 2.0e-14 84.3 57 71.9
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 9.2e-12 75.5 54 66.7
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 1.2e-11 75.1 60 61.7
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 9.5e-09 65.5 93 40.9


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