Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G19800 Arabidopsis thaliana HOM05D005591 ORTHO05D007131 1.1e-195 686.4 351 100.0
AL1G32520 Arabidopsis lyrata HOM05D005591 ORTHO05D007131 1.2e-189 666.4 351 97.2
Carub.0001s1933 Capsella rubella HOM05D005591 ORTHO05D007131 7.7e-184 647.1 353 94.6
CARHR020310 Cardamine hirsuta HOM05D005591 ORTHO05D007131 2.3e-180 635.6 355 93.5
Sp1g17610 Schrenkiella parvula HOM05D005591 ORTHO05D007131 2.3e-180 635.6 351 93.7
BcaC07g38997 Brassica carinata HOM05D005591 ORTHO05D007131 1.8e-177 625.9 351 92.9
C08p19710 Brassica napus HOM05D005591 ORTHO05D007131 1.8e-177 625.9 351 92.9
BolC8t49608H Brassica oleracea HOM05D005591 ORTHO05D007131 4.1e-177 624.8 351 92.6
BraA06t24698Z Brassica rapa HOM05D005591 ORTHO05D007131 2.2e-175 619.0 354 91.8
Thhalv10008071m.g Eutrema salsugineum HOM05D005591 ORTHO05D007131 1.2e-173 613.2 352 91.2
BcaB03g12900 Brassica carinata HOM05D005591 ORTHO05D007131 2.1e-173 612.5 351 91.2
BolC5t30530H Brassica oleracea HOM05D005591 ORTHO05D007131 2.7e-173 612.1 355 91.3
C05p18230 Brassica napus HOM05D005591 ORTHO05D007131 1.8e-172 609.4 355 91.3
A06p15920 Brassica napus HOM05D005591 ORTHO05D007131 5.7e-171 604.4 354 91.0
Aa31LG7G4330 Aethionema arabicum HOM05D005591 ORTHO05D007131 9.4e-166 587.0 351 86.0
THA.LOC104827705 Tarenaya hassleriana HOM05D005591 ORTHO05D007131 1.2e-160 570.1 351 83.8
BcaB07g31994 Brassica carinata HOM05D005591 ORTHO05D007131 3.4e-147 525.4 355 80.8
Gorai.011G147400 Gossypium raimondii HOM05D005591 ORTHO05D007131 7.0e-137 491.1 352 73.0
Ciclev10020911m.g Citrus clementina HOM05D005591 ORTHO05D007131 2.7e-136 489.2 303 81.5
Potri.002G234400 Populus trichocarpa HOM05D005591 ORTHO05D007131 2.9e-135 485.7 354 72.3
Sabra02G0178800 Salix brachista HOM05D005591 ORTHO05D007131 3.9e-135 485.3 326 77.0
Dinv27163 Davidia involucrata HOM05D005591 ORTHO05D007131 6.6e-135 484.6 318 78.0
Peaxi162Scf00673g00002 Petunia axillaris HOM05D005591 ORTHO05D007131 8.6e-135 484.2 312 78.5
QL05p063015 Quercus lobata HOM05D005591 ORTHO05D007131 8.6e-135 484.2 314 78.0
TWI60G1035 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 1.5e-134 483.4 351 71.2
CiPaw.01G109900 Carya illinoinensis HOM05D005591 ORTHO05D007131 1.9e-134 483.0 321 77.6
Duzib212G0264 Durio zibethinus HOM05D005591 ORTHO05D007131 1.2e-133 480.3 313 78.9
Glyma.20G208100 Glycine max HOM05D005591 ORTHO05D007131 1.6e-133 479.9 358 70.4
Lj2P1154T29 Lonicera japonica HOM05D005591 ORTHO05D007131 3.6e-133 478.8 318 75.5
Nitab4.5_0000368g0340 Nicotiana tabacum HOM05D005591 ORTHO05D007131 3.6e-133 478.8 316 77.8
TWI34G1086 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 4.7e-133 478.4 352 70.2
Nitab4.5_0006072g0030 Nicotiana tabacum HOM05D005591 ORTHO05D007131 6.1e-133 478.0 312 78.8
Gorai.006G226400 Gossypium raimondii HOM05D005591 ORTHO05D007131 8.0e-133 477.6 318 75.8
Thecc.04G188000 Theobroma cacao HOM05D005591 ORTHO05D007131 8.0e-133 477.6 318 76.4
Gohir.A09G209100 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.4e-132 476.9 318 76.1
CSS0046220 Camellia sinensis var. sinensis HOM05D005591 ORTHO05D007131 1.5e-131 473.4 315 76.2
Gohir.D09G202500 Gossypium hirsutum HOM05D005591 ORTHO05D007131 2.6e-131 472.6 318 75.5
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla HOM05D005591 ORTHO05D007131 3.4e-131 472.2 315 75.6
Manes.16G070000 Manihot esculenta HOM05D005591 ORTHO05D007131 7.5e-131 471.1 352 70.7
PGR083G2576 Punica granatum HOM05D005591 ORTHO05D007131 7.5e-131 471.1 306 78.4
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea HOM05D005591 ORTHO05D007131 9.8e-131 470.7 305 77.4
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea HOM05D005591 ORTHO05D007131 9.8e-131 470.7 305 77.4
CAN.G1648.2 Capsicum annuum HOM05D005591 ORTHO05D007131 9.8e-131 470.7 305 79.7
VMungo0720G0134 Vigna mungo HOM05D005591 ORTHO05D007131 9.8e-131 470.7 315 75.2
Actinidia35920 Actinidia chinensis HOM05D005591 ORTHO05D007131 2.2e-130 469.5 318 76.1
Medtr3g005100 Medicago truncatula HOM05D005591 ORTHO05D007131 2.9e-130 469.2 351 69.5
Glyma.10G181900 Glycine max HOM05D005591 ORTHO05D007131 3.7e-130 468.8 360 68.1
Psat5g221840 Pisum sativum HOM05D005591 ORTHO05D007131 3.7e-130 468.8 350 69.7
TPR.G25529 Trifolium pratense HOM05D005591 ORTHO05D007131 6.4e-130 468.0 350 69.1
TPR.G37202 Trifolium pratense HOM05D005591 ORTHO05D007131 8.3e-130 467.6 350 69.1
MSTRG.18314 Avicennia marina HOM05D005591 ORTHO05D007131 1.1e-129 467.2 303 78.9
Gohir.A10G133200 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.1e-129 467.2 290 82.1
Phvul.008G142801 Phaseolus vulgaris HOM05D005591 ORTHO05D007131 1.1e-129 467.2 313 75.1
PGSC0003DMG402024734 Solanum tuberosum HOM05D005591 ORTHO05D007131 4.1e-129 465.3 307 77.2
TAR375G0642 Trochodendron aralioides HOM05D005591 ORTHO05D007131 5.4e-129 464.9 322 74.2
SalBow4G1598 Salvia bowleyana HOM05D005591 ORTHO05D007131 9.2e-129 464.2 319 75.5
Solyc01g100250.3 Solanum lycopersicum HOM05D005591 ORTHO05D007131 9.2e-129 464.2 305 77.7
Ca_26812_v3 Cicer arietinum L. HOM05D005591 ORTHO05D007131 1.2e-128 463.8 348 69.0
Lj3g0022648 Lotus japonicus HOM05D005591 ORTHO05D007131 1.6e-128 463.4 362 67.7
SalBow4G1474 Salvia bowleyana HOM05D005591 ORTHO05D007131 7.8e-128 461.1 318 75.2
EL10Ac9g21576 Beta vulgaris HOM05D005591 ORTHO05D007131 1.0e-127 460.7 303 77.9
CsaV3_6G003160 Cucumis sativus L. HOM05D005591 ORTHO05D007131 2.5e-126 456.1 310 75.2
ClCG08G003960 Citrullus lanatus HOM05D005591 ORTHO05D007131 3.3e-126 455.7 309 74.8
Lalb_Chr12g0205911 Lupinus albus HOM05D005591 ORTHO05D007131 3.3e-126 455.7 331 70.4
AUR62010234 Chenopodium quinoa HOM05D005591 ORTHO05D007131 9.5e-126 454.1 303 76.2
Sed0000259 Sechium edule HOM05D005591 ORTHO05D007131 9.5e-126 454.1 303 76.2
Lalb_Chr12g0209371 Lupinus albus HOM05D005591 ORTHO05D007131 1.2e-125 453.8 303 75.9
AUR62013219 Chenopodium quinoa HOM05D005591 ORTHO05D007131 2.1e-125 453.0 303 76.2
MELO3C011502.2 Cucumis melo HOM05D005591 ORTHO05D007131 2.1e-125 453.0 310 75.2
ClCG00G002040 Citrullus lanatus HOM05D005591 ORTHO05D007131 8.0e-125 451.1 307 74.9
COL.COLO4_08690 Corchorus olitorius HOM05D005591 ORTHO05D007131 2.3e-124 449.5 313 74.8
Nn3g18591 Nelumbo nucifera HOM05D005591 ORTHO05D007131 5.8e-123 444.9 318 72.0
Aqoxy5G02725 Aquilegia oxysepala HOM05D005591 ORTHO05D007131 9.8e-123 444.1 301 76.1
MBI07_g20439_MAGBIO Magnolia biondii HOM05D005591 ORTHO05D007131 4.1e-121 438.7 301 73.4
SGA_v2.0_scaffold1G00602 Striga asiatica HOM05D005591 ORTHO05D002031 1.2e-120 437.2 320 70.6
Atru.chr7.136 Acer truncatum HOM05D005591 ORTHO05D007131 2.1e-120 436.4 350 64.0
ATR0681G262 Amborella trichopoda HOM05D005591 ORTHO05D007131 5.1e-119 431.8 296 75.7
Gohir.D10G133600 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.5e-118 430.3 352 66.2
SGA_v2.0_scaffold90G27691 Striga asiatica HOM05D005591 ORTHO05D007131 3.3e-118 429.1 293 74.7
Lsat_1_v5_gn_1_5881 Lactuca sativa HOM05D005591 ORTHO05D007131 1.6e-117 426.8 287 76.3
GSVIVG01031642001 Vitis vinifera HOM05D005591 ORTHO05D007131 2.1e-117 426.4 355 64.2
Oeu061431.3 Olea europaea HOM05D005591 ORTHO05D007131 3.6e-117 425.6 361 64.3
Cc11_g03530 Coffea canephora HOM05D005591 ORTHO05D007131 6.8e-116 421.4 299 73.6
Eucgr.E02433 Eucalyptus grandis HOM05D005591 ORTHO05D007131 8.9e-116 421.0 306 71.9
Haze_12970 Corylus avellana HOM05D005591 ORTHO05D007131 1.5e-115 420.2 299 73.2
Haze_05998 Corylus avellana HOM05D005591 ORTHO05D007131 4.9e-114 415.2 319 68.7
Cfa014468 Carpinus fangiana HOM05D005591 ORTHO05D007131 6.4e-114 414.8 299 72.9
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 1.1e-113 414.1 300 70.0
CANSAT78G0984 Cannabis sativa HOM05D005591 ORTHO05D007131 2.4e-113 412.9 355 62.5
MD05G1209200 Malus domestica HOM05D005591 ORTHO05D007131 4.1e-113 412.1 299 71.2
Hund00109 Selenicereus undatus HOM05D005591 ORTHO05D007131 5.4e-113 411.8 309 68.9
Sopen01g043760 Solanum pennellii HOM05D005591 ORTHO05D007131 1.6e-112 410.2 269 77.3
Duzib151G0749 Durio zibethinus HOM05D005591 ORTHO05D007131 2.1e-112 409.8 242 86.0
FAN16G2920 Fragaria x ananassa HOM05D005591 ORTHO05D007131 2.7e-112 409.5 315 66.0
FAN11G3688 Fragaria x ananassa HOM05D005591 ORTHO05D007131 4.6e-112 408.7 315 65.7
RcHm_v2.0_Chr5g0027591 Rosa chinensis HOM05D005591 ORTHO05D007131 4.6e-112 408.7 315 65.7
FvH4_3g16560 Fragaria vesca HOM05D005591 ORTHO05D007131 6.0e-112 408.3 315 65.7
CAN.G1273.6 Capsicum annuum HOM05D005591 ORTHO05D007131 1.7e-111 406.8 342 63.2
Prupe.4G148300 Prunus persica HOM05D005591 ORTHO05D007131 6.6e-111 404.8 353 60.9
FAN21G2901 Fragaria x ananassa HOM05D005591 ORTHO05D007131 1.5e-110 403.7 315 65.7
ECA232G4773 Erigeron canadensis HOM05D005591 ORTHO05D007131 4.3e-110 402.1 299 69.2
PSO063G3984 Papaver somniferum HOM05D005591 ORTHO05D007131 5.6e-110 401.7 308 67.5
PSO339G5872 Papaver somniferum HOM05D005591 ORTHO05D007131 1.6e-109 400.2 308 67.2
Sc08g0001750 Simmondsia chinensis HOM05D005591 ORTHO05D007131 1.6e-109 400.2 317 67.2
MD10G1195600 Malus domestica HOM05D005591 ORTHO05D007131 4.7e-109 398.7 297 69.4
HanXRQChr10g0315741 Helianthus annuus HOM05D005591 ORTHO05D007131 6.2e-109 398.3 291 70.4
Migut.D00413 Erythranthe guttata HOM05D005591 ORTHO05D007131 4.4e-107 392.1 319 66.1
SEGI_17332 Sequoiadendron giganteum HOM05D005591 ORTHO05D007131 1.1e-105 387.5 289 69.2
SMO367G0743 Selaginella moellendorffii HOM05D005591 ORTHO05D007131 1.2e-104 384.0 255 74.9
Os04g0553000 Oryza sativa ssp. japonica HOM05D005591 ORTHO05D007131 1.3e-103 380.6 258 73.3
CDE02G1973 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 5.1e-103 378.6 355 58.9
Zm00001eb074560 Zea mays HOM05D005591 ORTHO05D007131 5.6e-102 375.2 257 72.8
Pp3c1_16480 Physcomitrium patens HOM05D005591 ORTHO05D007131 1.6e-101 373.6 294 65.6
FAN25G3010 Fragaria x ananassa HOM05D005591 ORTHO05D007131 2.1e-101 373.2 315 62.9
Mapoly0204s0010 Marchantia polymorpha HOM05D005591 ORTHO05D007131 2.1e-101 373.2 302 63.9
Rhsim02G0070200 Rhododendron simsii HOM05D005591 ORTHO05D007131 9.0e-100 367.9 312 64.7
CBR_g24384 Chara braunii HOM05D005591 ORTHO05D007131 1.5e-99 367.1 287 65.5
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis HOM05D005591 ORTHO05D007131 9.3e-97 357.8 241 76.8
Medtr3g008040 Medicago truncatula HOM05D005591 ORTHO05D007131 5.6e-94 348.6 357 56.9
Cre06.g268200 Chlamydomonas reinhardtii HOM05D005591 ORTHO05D007131 4.6e-88 328.9 251 64.5
PRCOL_00005194 Prasinoderma coloniale HOM05D005591 ORTHO05D007131 9.6e-86 321.2 255 63.1
HPP92_028331 Vanilla planifolia HOM05D005591 ORTHO05D007131 3.8e-82 309.3 268 63.4
Cpa.g.sc8.310 Carica papaya HOM05D005591 ORTHO05D007131 3.2e-81 306.2 177 88.1
MCO01G348 Micromonas commoda HOM05D005591 ORTHO05D007131 8.4e-74 281.6 270 54.4
vmacro15598 Vaccinium macrocarpon HOM05D005591 ORTHO05D007131 1.0e-66 258.1 286 54.5
CDE11G0925 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 1.7e-66 257.3 191 72.3
unitig_22.g5460 Utricularia gibba HOM05D005591 ORTHO05D007131 4.2e-65 252.7 180 70.6
CBR_g4088 Chara braunii HOM05D005591 ORTHO05D007131 2.0e-51 207.2 146 71.2
BraA08t34904Z Brassica rapa HOM05D005591 ORTHO05D011946 2.8e-45 186.8 124 80.6
CBR_g4089 Chara braunii HOM05D005591 ORTHO05D007131 3.2e-41 173.3 114 70.2
unitig_22.g5461 Utricularia gibba HOM05D005591 ORTHO05D007131 1.6e-40 171.0 103 86.4
DCAR_018469 Daucus carota HOM05D005591 ORTHO05D007131 5.4e-36 156.0 103 75.7
DCAR_018470 Daucus carota HOM05D005591 ORTHO05D007131 5.4e-36 156.0 103 75.7
BcaC05g25857 Brassica carinata HOM05D005591 ORTHO05D007131 1.1e-25 121.7 63 100.0
Actinidia29179 Actinidia chinensis HOM05D005591 ORTHO05D007131 3.2e-20 103.6 60 88.3
Ca_28569_v3 Cicer arietinum L. HOM05D005591 ORTHO05D149412 1.2e-19 101.7 192 31.8
Cc01_g18470 Coffea canephora HOM05D005591 ORTHO05D007131 1.5e-09 68.2 45 62.2


User provided reference genes

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