Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 1.5e-109 399.4 193 100.0
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 1.1e-104 383.3 189 97.4
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 2.4e-102 375.6 189 95.2
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 4.0e-102 374.8 189 93.7
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 3.0e-97 358.6 189 89.9
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 3.9e-97 358.2 189 89.9
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 1.1e-96 356.7 189 89.4
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 3.3e-96 355.1 189 88.9
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 3.3e-96 355.1 189 88.9
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 6.2e-95 350.9 190 88.4
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 1.4e-94 349.7 189 86.8
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 1.6e-87 326.2 189 78.8
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.3e-79 300.1 190 72.6
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 6.3e-79 297.7 190 74.2
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 6.3e-79 297.7 190 74.2
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 1.1e-78 297.0 190 75.3
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.4e-78 295.8 190 73.7
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 3.4e-77 292.0 188 73.4
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 5.9e-77 291.2 189 72.5
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 1.0e-76 290.4 189 72.0
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 1.0e-76 290.4 189 71.4
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 1.3e-76 290.0 190 72.1
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 1.4e-75 286.6 190 71.6
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 1.4e-75 286.6 194 71.6
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 1.9e-75 286.2 190 68.9
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 3.2e-75 285.4 190 70.5
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 3.2e-75 285.4 190 71.6
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 4.2e-75 285.0 190 72.1
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 5.5e-75 284.6 187 70.6
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 7.2e-75 284.3 190 70.0
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 7.2e-75 284.3 193 69.4
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 1.2e-74 283.5 186 71.5
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 1.2e-74 283.5 194 70.1
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 1.6e-74 283.1 186 72.6
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 1.6e-74 283.1 190 68.4
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 1.6e-74 283.1 191 68.1
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 1.6e-74 283.1 187 70.1
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 1.6e-74 283.1 186 70.4
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 1.6e-74 283.1 186 69.9
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 2.7e-74 282.3 191 68.1
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 2.7e-74 282.3 190 68.9
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 3.6e-74 282.0 190 68.9
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 7.9e-74 280.8 190 69.5
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 1.4e-73 280.0 190 69.5
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 1.4e-73 280.0 186 71.0
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.8e-73 279.6 187 70.6
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 1.8e-73 279.6 187 69.5
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 2.3e-73 279.3 189 70.4
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 3.9e-73 278.5 186 71.5
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 3.9e-73 278.5 186 69.9
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 3.9e-73 278.5 186 69.9
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 5.1e-73 278.1 186 69.9
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 5.1e-73 278.1 186 69.9
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 2.5e-72 275.8 186 69.9
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 3.3e-72 275.4 187 69.5
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 3.3e-72 275.4 189 68.8
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 3.3e-72 275.4 191 70.7
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 3.3e-72 275.4 186 68.3
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 7.4e-72 274.2 189 69.8
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 7.4e-72 274.2 190 66.3
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 7.4e-72 274.2 190 69.5
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 9.7e-72 273.9 186 67.7
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 2.8e-71 272.3 187 70.1
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 4.8e-71 271.6 190 66.8
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 6.3e-71 271.2 189 68.3
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 8.2e-71 270.8 195 68.7
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.1e-70 270.4 186 68.8
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 1.1e-70 270.4 189 70.9
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 1.4e-70 270.0 189 69.8
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 2.4e-70 269.2 190 67.9
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 2.4e-70 269.2 189 66.7
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 2.4e-70 269.2 189 71.4
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 4.1e-70 268.5 187 67.4
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 9.1e-70 267.3 205 63.9
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.5e-69 266.5 193 66.3
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 2.0e-69 266.2 190 65.8
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 2.6e-69 265.8 189 66.7
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 4.5e-69 265.0 188 67.0
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 4.5e-69 265.0 186 68.3
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 1.0e-68 263.8 190 67.9
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 1.0e-68 263.8 195 66.2
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 1.3e-68 263.5 188 66.5
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 8.5e-68 260.8 221 59.3
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 1.1e-67 260.4 190 65.3
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 1.9e-67 259.6 190 66.8
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 3.2e-67 258.8 192 64.6
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 7.2e-67 257.7 187 64.7
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 3.6e-66 255.4 189 63.0
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 4.7e-66 255.0 192 65.6
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.0e-65 253.8 189 66.1
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 1.8e-65 253.1 226 55.8
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 5.1e-65 251.5 194 62.4
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 6.7e-65 251.1 185 62.7
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 9.7e-64 247.3 190 62.6
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 1.3e-63 246.9 189 63.0
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 3.7e-63 245.4 186 65.6
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 1.4e-62 243.4 190 61.1
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.4e-62 243.4 186 60.8
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 2.4e-62 242.7 195 64.6
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 2.4e-62 242.7 186 60.8
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 2.4e-62 242.7 176 68.2
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 3.1e-62 242.3 190 61.1
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 1.2e-61 240.4 187 60.4
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 8.5e-60 234.2 184 60.9
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.5e-59 233.4 145 73.8
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 1.2e-58 230.3 184 59.8
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 2.1e-58 229.6 179 64.8
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 1.8e-57 226.5 190 60.5
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 8.8e-57 224.2 190 60.0
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.6e-56 222.6 183 56.8
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 2.6e-56 222.6 144 70.8
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 2.2e-55 219.5 186 58.6
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.4e-54 216.9 189 59.3
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 9.1e-54 214.2 173 63.6
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 3.5e-53 212.2 191 53.4
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.3e-52 210.3 148 69.6
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 4.2e-51 205.3 175 57.1
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 3.6e-50 202.2 186 55.4
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.2e-48 197.2 132 69.7
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 4.5e-37 158.7 82 91.5
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 8.0e-34 147.9 111 60.4
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 2.7e-29 132.9 110 56.4
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.1e-27 127.5 83 71.1
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 4.7e-26 122.1 103 59.2
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.2e-24 117.5 115 52.2
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.5e-19 100.5 94 52.1
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 4.0e-17 92.4 75 61.3


User provided reference genes

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