Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 2.1e-169 599.0 303 100.0
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 5.8e-164 580.9 303 97.0
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 9.3e-162 573.5 303 95.7
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 6.0e-161 570.9 303 94.7
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 2.3e-160 568.9 303 94.1
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 8.4e-155 550.4 299 91.3
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 1.9e-154 549.3 299 91.0
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 9.3e-154 547.0 299 90.3
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 6.0e-153 544.3 303 89.1
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 6.0e-153 544.3 303 89.8
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 1.3e-152 543.1 303 89.8
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 1.1e-151 540.0 299 89.6
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 1.1e-151 540.0 299 89.6
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 1.1e-151 540.0 299 89.6
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 1.1e-151 540.0 303 89.1
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 7.4e-151 537.3 303 88.8
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 7.4e-151 537.3 303 88.8
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 3.2e-138 495.4 299 82.9
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 2.5e-135 485.7 301 79.4
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 3.4e-132 475.3 301 77.7
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 4.4e-127 458.4 300 76.0
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 4.8e-126 454.9 298 76.2
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 6.3e-126 454.5 300 73.0
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 2.4e-125 452.6 300 75.3
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 2.4e-125 452.6 298 73.5
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 2.4e-125 452.6 298 73.5
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 4.1e-125 451.8 298 74.2
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 4.1e-125 451.8 300 73.7
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 1.2e-124 450.3 300 73.0
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 1.5e-124 449.9 298 75.5
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.0e-124 449.5 298 75.5
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 2.0e-124 449.5 300 73.0
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 2.6e-124 449.1 300 73.3
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 2.6e-124 449.1 300 73.3
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 3.4e-124 448.7 302 72.8
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 7.7e-124 447.6 298 75.2
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 7.7e-124 447.6 302 71.9
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.0e-123 447.2 298 74.8
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 2.9e-123 445.7 300 73.7
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 3.8e-123 445.3 298 74.8
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 6.5e-123 444.5 301 74.4
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 6.5e-123 444.5 300 73.0
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 8.5e-123 444.1 300 73.3
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.1e-122 443.7 298 74.2
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 1.9e-122 443.0 300 71.7
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 3.2e-122 442.2 300 72.7
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 2.1e-121 439.5 300 72.7
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 2.7e-121 439.1 300 72.0
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 2.7e-121 439.1 300 72.0
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 3.6e-121 438.7 300 74.3
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 4.7e-121 438.3 298 72.5
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 6.1e-121 438.0 300 72.7
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 6.1e-121 438.0 300 71.0
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 6.1e-121 438.0 300 71.0
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 6.1e-121 438.0 302 72.2
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 6.1e-121 438.0 300 73.3
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 1.4e-120 436.8 300 71.7
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 1.4e-120 436.8 298 71.8
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 1.4e-120 436.8 300 70.7
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.8e-120 436.4 298 71.5
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 3.0e-120 435.6 300 71.7
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 3.0e-120 435.6 298 72.5
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 3.0e-120 435.6 300 73.3
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 3.9e-120 435.3 303 71.6
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 5.2e-120 434.9 300 73.0
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 1.5e-119 433.3 298 71.5
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 2.0e-119 433.0 300 71.3
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 2.6e-119 432.6 300 70.3
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 4.4e-119 431.8 302 70.5
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 7.4e-119 431.0 300 71.0
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.8e-117 426.4 300 70.3
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 2.4e-117 426.0 298 69.5
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 5.3e-117 424.9 300 69.7
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.6e-116 423.3 300 69.7
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.6e-116 423.3 300 71.0
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 7.7e-116 421.0 300 69.0
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 7.7e-116 421.0 303 69.6
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 7.7e-116 421.0 302 68.9
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.7e-115 419.9 294 69.7
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 2.9e-115 419.1 303 69.3
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 5.5e-114 414.8 304 67.4
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 9.4e-114 414.1 300 68.0
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 2.7e-113 412.5 300 66.7
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 1.4e-112 410.2 302 68.9
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 2.3e-112 409.5 302 67.5
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 5.2e-112 408.3 303 67.0
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 1.2e-111 407.1 304 66.8
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 4.4e-111 405.2 293 70.0
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 1.7e-110 403.3 310 66.8
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 2.2e-110 402.9 302 68.5
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 1.1e-109 400.6 300 67.3
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 3.5e-108 395.6 284 67.6
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 1.7e-107 393.3 303 65.3
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 4.4e-103 378.6 275 68.7
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 7.5e-103 377.9 300 63.0
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 1.0e-99 367.5 248 73.8
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 1.5e-98 363.6 248 69.4
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 4.4e-95 352.1 297 59.3
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 7.5e-95 351.3 301 60.8
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 8.3e-94 347.8 221 73.3
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.0e-91 340.9 303 59.4
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 2.1e-89 333.2 229 70.7
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 4.7e-89 332.0 256 66.0
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 5.2e-88 328.6 248 65.7
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 2.6e-87 326.2 228 70.6
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 9.8e-87 324.3 254 63.8
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 8.3e-86 321.2 219 73.5
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 7.0e-85 318.2 220 70.0
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 9.2e-85 317.8 224 68.3
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 2.0e-84 316.6 235 66.0
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 6.2e-81 305.1 277 55.6
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 3.6e-73 279.3 338 47.6
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 8.3e-70 268.1 300 52.3
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 4.7e-65 252.3 173 67.6
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 2.4e-56 223.4 318 41.8
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 3.0e-43 179.9 341 35.2
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 6.2e-41 172.2 157 59.9
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.0e-39 167.2 166 54.2
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 1.7e-38 164.1 177 49.7
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.3e-33 147.9 105 69.5
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 4.0e-32 142.9 300 35.3
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 2.9e-30 136.7 87 70.1
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 7.6e-23 112.1 91 62.6
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 1.0e-22 111.7 88 61.4
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 1.1e-21 108.2 72 68.1
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 1.9e-21 107.5 350 30.0
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 1.9e-21 107.5 86 66.3
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 3.6e-20 103.2 134 47.0
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 4.3e-18 96.3 64 78.1
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 3.7e-17 93.2 67 58.2
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 4.4e-10 69.7 43 72.1


User provided reference genes

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