Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 5.1e-104 381.3 227 100.0
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 9.6e-103 377.1 227 97.4
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 1.2e-97 360.1 227 82.8
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 3.9e-96 355.1 227 88.1
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 2.5e-95 352.4 227 86.8
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 2.4e-93 345.9 225 88.9
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 5.3e-93 344.7 227 86.3
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 1.2e-92 343.6 227 87.2
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 1.2e-92 343.6 227 87.2
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 5.8e-92 341.3 227 86.8
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 5.8e-92 341.3 227 86.8
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 5.8e-92 341.3 227 86.8
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 1.4e-90 336.7 227 80.6
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 6.6e-88 327.8 227 86.3
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 5.3e-85 318.2 227 71.8
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 3.4e-84 315.5 227 68.3
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 4.5e-84 315.1 227 74.0
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 4.5e-84 315.1 227 71.4
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 8.4e-83 310.8 227 72.7
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 8.4e-83 310.8 227 70.0
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 1.1e-82 310.5 227 70.0
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 1.9e-82 309.7 225 68.4
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 3.2e-82 308.9 227 68.3
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 3.2e-82 308.9 227 68.3
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 5.4e-82 308.1 210 77.1
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 7.1e-82 307.8 227 67.8
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 7.1e-82 307.8 227 67.8
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 7.1e-82 307.8 227 69.6
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 9.3e-82 307.4 227 68.7
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 1.2e-81 307.0 225 70.7
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 1.2e-81 307.0 225 70.7
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 1.6e-81 306.6 227 66.5
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 2.1e-81 306.2 227 67.4
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 2.1e-81 306.2 227 67.8
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 2.7e-81 305.8 225 69.8
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 3.5e-81 305.4 227 69.6
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 4.6e-81 305.1 227 68.3
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 1.0e-80 303.9 227 67.8
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 1.0e-80 303.9 227 67.4
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 1.0e-80 303.9 227 68.3
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 1.0e-80 303.9 227 67.8
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 1.3e-80 303.5 227 67.4
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 2.3e-80 302.8 227 68.7
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 2.3e-80 302.8 224 67.9
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 3.9e-80 302.0 225 78.2
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 5.1e-80 301.6 227 67.8
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 6.7e-80 301.2 227 65.6
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 1.5e-79 300.1 227 67.4
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 3.3e-79 298.9 225 78.2
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 7.4e-79 297.7 226 65.9
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 1.6e-78 296.6 225 65.3
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 2.1e-78 296.2 227 65.2
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 2.1e-78 296.2 227 65.2
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 3.7e-78 295.4 227 64.3
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 3.7e-78 295.4 227 65.6
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 6.2e-78 294.7 224 65.2
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 1.1e-77 293.9 224 71.0
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 1.4e-77 293.5 225 66.7
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 1.8e-77 293.1 224 65.6
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 4.0e-77 292.0 221 73.3
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 5.3e-77 291.6 227 67.8
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 9.0e-77 290.8 221 66.1
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 9.0e-77 290.8 218 67.0
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 1.5e-76 290.0 224 65.2
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 1.5e-76 290.0 227 64.8
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 2.0e-76 289.7 227 64.8
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 2.6e-76 289.3 237 62.4
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 3.4e-76 288.9 228 65.8
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 4.5e-76 288.5 224 73.2
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 7.6e-76 287.7 227 63.4
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 1.0e-75 287.3 224 64.7
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.0e-75 287.3 232 71.1
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 1.3e-75 287.0 225 64.0
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 1.3e-75 287.0 227 65.6
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 1.3e-75 287.0 227 64.8
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 1.7e-75 286.6 227 71.8
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 2.9e-75 285.8 260 59.2
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 3.8e-75 285.4 242 62.0
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 6.5e-75 284.6 228 65.4
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 8.4e-75 284.3 227 72.2
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 1.1e-74 283.9 267 57.3
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 2.7e-73 279.3 227 72.7
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 6.0e-73 278.1 227 71.4
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 1.0e-72 277.3 224 69.6
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 2.3e-72 276.2 227 61.7
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 5.1e-72 275.0 224 69.6
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 6.7e-72 274.6 225 59.6
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 1.1e-69 267.3 210 64.8
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 6.9e-69 264.6 242 59.5
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 6.9e-69 264.6 250 54.8
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 5.8e-68 261.5 209 63.6
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 6.5e-67 258.1 222 69.8
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 6.5e-67 258.1 222 69.8
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 1.2e-65 253.8 222 69.4
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 3.5e-65 252.3 203 61.6
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 1.0e-64 250.8 194 64.9
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 1.9e-63 246.5 195 70.3
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 8.2e-62 241.1 222 60.4
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 1.0e-59 234.2 214 54.2
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 5.5e-58 228.4 207 54.1
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 1.6e-57 226.9 193 59.1
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 2.3e-56 223.0 235 48.5
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 5.1e-56 221.9 213 53.5
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 1.8e-53 213.4 221 49.8
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 2.9e-51 206.1 207 51.7
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 2.6e-44 183.0 213 45.5
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 2.0e-39 166.8 139 57.6
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 5.7e-39 165.2 184 50.5
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 2.8e-38 162.9 210 47.1
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 2.7e-33 146.4 195 39.5
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 9.1e-29 131.3 99 70.7
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 4.7e-25 119.0 150 49.3
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 3.0e-24 116.3 81 63.0
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 1.5e-15 87.4 220 36.8
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 4.1e-13 79.3 200 27.0
Medtr5g055130 Medicago truncatula HOM05D002518 ORTHO05D002630 6.2e-09 65.5 107 45.8
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 6.8e-08 62.0 95 45.3
C05p10030 Brassica napus HOM05D006955 ORTHO05D008701 1.2e-07 61.2 33 84.8
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 1.3e-06 57.8 221 25.3


User provided reference genes

Program Settings