Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G08550 Arabidopsis thaliana HOM05D006573 ORTHO05D008073 4.3e-259 897.5 463 100.0
AL1G18980 Arabidopsis lyrata HOM05D006573 ORTHO05D008073 4.9e-247 857.4 463 94.4
Carub.0001s0791 Capsella rubella HOM05D006573 ORTHO05D008073 1.0e-244 849.7 463 94.8
CARHR008450 Cardamine hirsuta HOM05D006573 ORTHO05D008073 2.7e-237 825.1 469 89.1
Thhalv10007587m.g Eutrema salsugineum HOM05D006573 ORTHO05D008073 8.7e-228 793.5 464 86.6
BraA06t23762Z Brassica rapa HOM05D006573 ORTHO05D008073 4.5e-224 781.2 463 85.3
A06p05540 Brassica napus HOM05D006573 ORTHO05D008073 5.8e-224 780.8 463 85.3
Sp1g07210 Schrenkiella parvula HOM05D006573 ORTHO05D008073 1.3e-223 779.6 466 83.9
C05p06650 Brassica napus HOM05D006573 ORTHO05D008073 3.0e-220 768.5 458 84.9
BolC5t29425H Brassica oleracea HOM05D006573 ORTHO05D008073 1.5e-219 766.1 458 84.5
BcaB07g34098 Brassica carinata HOM05D006573 ORTHO05D008073 2.5e-211 738.8 463 81.2
Aa31sc20G120 Aethionema arabicum HOM05D006573 ORTHO05D008073 5.3e-209 731.1 466 78.8
THA.LOC104805797 Tarenaya hassleriana HOM05D006573 ORTHO05D008073 1.2e-189 666.8 466 72.1
Potri.013G053100 Populus trichocarpa HOM05D006573 ORTHO05D008073 5.9e-176 621.3 388 78.4
TAR362G0441 Trochodendron aralioides HOM05D006573 ORTHO05D008073 1.1e-174 617.1 380 78.7
Eucgr.B02180 Eucalyptus grandis HOM05D006573 ORTHO05D008073 1.9e-174 616.3 378 77.2
Manes.09G144600 Manihot esculenta HOM05D006573 ORTHO05D008073 1.6e-173 613.2 393 75.1
Sabra13G0048100 Salix brachista HOM05D006573 ORTHO05D008073 2.8e-173 612.5 531 62.0
GSVIVG01026405001 Vitis vinifera HOM05D006573 ORTHO05D008073 6.1e-173 611.3 390 74.1
CSS0006565 Camellia sinensis var. sinensis HOM05D006573 ORTHO05D008073 1.0e-172 610.5 392 74.7
Thecc.05G259800 Theobroma cacao HOM05D006573 ORTHO05D008073 4.0e-172 608.6 432 69.4
Cpa.g.sc51.78 Carica papaya HOM05D006573 ORTHO05D008073 2.6e-171 605.9 392 76.5
Haze_04495 Corylus avellana HOM05D006573 ORTHO05D008073 2.6e-171 605.9 369 77.0
CANSAT21G0678 Cannabis sativa HOM05D006573 ORTHO05D008073 9.8e-171 604.0 370 77.0
FAN05G2122 Fragaria x ananassa HOM05D006573 ORTHO05D008073 9.8e-171 604.0 393 71.8
FAN05G3303 Fragaria x ananassa HOM05D006573 ORTHO05D008073 9.8e-171 604.0 393 71.8
Cc09_g03200 Coffea canephora HOM05D006573 ORTHO05D008073 1.3e-170 603.6 368 78.8
Nn1g07946 Nelumbo nucifera HOM05D006573 ORTHO05D008073 1.3e-170 603.6 386 75.6
Prupe.6G356100 Prunus persica HOM05D006573 ORTHO05D008073 1.3e-170 603.6 378 75.9
RcHm_v2.0_Chr3g0448661 Rosa chinensis HOM05D006573 ORTHO05D008073 1.7e-170 603.2 393 72.0
Ciclev10019925m.g Citrus clementina HOM05D006573 ORTHO05D008073 3.7e-170 602.1 380 76.1
Duzib177G1122 Durio zibethinus HOM05D006573 ORTHO05D008073 1.4e-169 600.1 433 68.1
Lj1g0015745 Lotus japonicus HOM05D006573 ORTHO05D008073 1.4e-169 600.1 407 71.0
MD12G1255200 Malus domestica HOM05D006573 ORTHO05D008073 1.8e-169 599.7 378 75.7
Gohir.D11G250400 Gossypium hirsutum HOM05D006573 ORTHO05D008073 3.2e-169 599.0 380 76.1
Gorai.007G268500 Gossypium raimondii HOM05D006573 ORTHO05D008073 3.2e-169 599.0 380 76.1
Actinidia06814 Actinidia chinensis HOM05D006573 ORTHO05D008073 4.1e-169 598.6 369 77.0
Ca_09476_v3 Cicer arietinum L. HOM05D006573 ORTHO05D008073 2.0e-168 596.3 370 78.4
Hma1.2p1_0123F.1_g058030 Hydrangea macrophylla HOM05D006573 ORTHO05D008073 2.7e-168 595.9 370 76.5
PSO017G7064 Papaver somniferum HOM05D006573 ORTHO05D008073 4.6e-168 595.1 377 78.5
Glyma.03G253500 Glycine max HOM05D006573 ORTHO05D008073 7.8e-168 594.3 378 74.9
Medtr7g116630 Medicago truncatula HOM05D006573 ORTHO05D008073 1.3e-167 593.6 370 74.9
FAN14G5930 Fragaria x ananassa HOM05D006573 ORTHO05D008073 1.7e-167 593.2 401 70.3
PSO063G7541 Papaver somniferum HOM05D006573 ORTHO05D008073 1.7e-167 593.2 377 78.2
Dinv19279 Davidia involucrata HOM05D006573 ORTHO05D008073 3.9e-167 592.0 388 73.2
TPR.G4727 Trifolium pratense HOM05D006573 ORTHO05D008073 5.0e-167 591.7 378 75.1
SGA_v2.0_scaffold13G06342 Striga asiatica HOM05D006573 ORTHO05D008073 6.6e-167 591.3 364 77.2
FvH4_6g01130 Fragaria vesca HOM05D006573 ORTHO05D008073 8.6e-167 590.9 401 69.8
FAN09G4254 Fragaria x ananassa HOM05D006573 ORTHO05D008073 1.1e-166 590.5 401 69.8
Atru.chr2.1254 Acer truncatum HOM05D006573 ORTHO05D008073 2.5e-166 589.3 393 73.5
VMungo0540G0667 Vigna mungo HOM05D006573 ORTHO05D008073 3.3e-166 589.0 370 75.9
Glyma.19G251000 Glycine max HOM05D006573 ORTHO05D008073 7.3e-166 587.8 378 74.1
Aqoxy2G03898 Aquilegia oxysepala HOM05D006573 ORTHO05D008073 2.8e-165 585.9 370 77.0
MBI11_g07442_MAGBIO Magnolia biondii HOM05D006573 ORTHO05D008073 3.6e-165 585.5 370 74.6
Phvul.006G108200 Phaseolus vulgaris HOM05D006573 ORTHO05D008073 1.0e-164 583.9 370 76.2
AUR62005294 Chenopodium quinoa HOM05D006573 ORTHO05D008073 1.4e-164 583.6 397 71.8
Nitab4.5_0012098g0010 Nicotiana tabacum HOM05D006573 ORTHO05D008073 1.8e-164 583.2 357 77.9
PGSC0003DMG400010688 Solanum tuberosum HOM05D006573 ORTHO05D008073 3.1e-164 582.4 357 78.2
AUR62000660 Chenopodium quinoa HOM05D006573 ORTHO05D008073 5.2e-164 581.6 397 72.0
Nitab4.5_0000344g0030 Nicotiana tabacum HOM05D006573 ORTHO05D008073 8.9e-164 580.9 357 77.3
ATR0069G016 Amborella trichopoda HOM05D006573 ORTHO05D008073 1.5e-163 580.1 365 76.7
Sopen04g022050 Solanum pennellii HOM05D006573 ORTHO05D008073 3.4e-163 578.9 357 78.7
arahy.Tifrunner.gnm1.ann1.ZGZX3T Arachis hypogaea HOM05D006573 ORTHO05D008073 7.5e-163 577.8 369 74.3
MSTRG.8177 Avicennia marina HOM05D006573 ORTHO05D008073 7.5e-163 577.8 364 78.3
Solyc04g050930.3 Solanum lycopersicum HOM05D006573 ORTHO05D008073 9.8e-163 577.4 357 78.4
Sc09g0001730 Simmondsia chinensis HOM05D006573 ORTHO05D008073 1.7e-162 576.6 370 75.1
CDE05G0683 Ceratophyllum demersum HOM05D006573 ORTHO05D008073 2.2e-162 576.2 370 75.4
TWI34G1215 Tripterygium wilfordii HOM05D006573 ORTHO05D008073 2.2e-162 576.2 390 76.2
arahy.Tifrunner.gnm1.ann1.L0KK3Q Arachis hypogaea HOM05D006573 ORTHO05D008073 2.9e-162 575.9 369 74.0
CAN.G29.20 Capsicum annuum HOM05D006573 ORTHO05D008073 6.4e-162 574.7 357 76.2
Migut.F02066 Erythranthe guttata HOM05D006573 ORTHO05D008073 1.1e-161 573.9 364 75.0
HanXRQChr13g0406621 Helianthus annuus HOM05D006573 ORTHO05D008073 2.4e-161 572.8 369 76.7
EL10Ac4g09803 Beta vulgaris HOM05D006573 ORTHO05D008073 1.6e-160 570.1 370 75.4
ECA248G2645 Erigeron canadensis HOM05D006573 ORTHO05D008073 4.6e-160 568.5 379 73.9
Lj2A407T38 Lonicera japonica HOM05D006573 ORTHO05D008073 6.0e-160 568.2 373 76.1
Lalb_Chr18g0044221 Lupinus albus HOM05D006573 ORTHO05D008073 1.3e-159 567.0 369 72.1
Lsat_1_v5_gn_7_62281 Lactuca sativa HOM05D006573 ORTHO05D008073 8.6e-159 564.3 369 77.2
CiPaw.07G075700 Carya illinoinensis HOM05D006573 ORTHO05D008073 2.5e-158 562.8 378 74.1
HPP92_020222 Vanilla planifolia HOM05D001545 ORTHO05D001600 5.6e-158 561.6 381 69.8
CSS0039030 Camellia sinensis var. sinensis HOM05D006573 ORTHO05D008073 3.6e-157 558.9 392 69.4
Oeu054601.1 Olea europaea HOM05D006573 ORTHO05D008073 3.6e-157 558.9 395 71.9
Gohir.A11G241000 Gossypium hirsutum HOM05D006573 ORTHO05D008073 4.7e-157 558.5 380 71.6
Peaxi162Scf01011g00215 Petunia axillaris HOM05D006573 ORTHO05D008073 1.8e-156 556.6 359 75.8
Psat3g005000 Pisum sativum HOM05D006573 ORTHO05D008073 2.3e-156 556.2 370 74.1
Zm00001eb085840 Zea mays HOM05D006573 ORTHO05D008073 4.0e-156 555.4 370 74.1
DCAR_013654 Daucus carota HOM05D006573 ORTHO05D008073 6.6e-151 538.1 398 67.1
Hund07152 Selenicereus undatus HOM05D006573 ORTHO05D008073 5.6e-150 535.0 369 73.7
Lj2A405T39 Lonicera japonica HOM05D006573 ORTHO05D008073 1.5e-147 526.9 364 68.1
Ah.06g188810 Amaranthus hybridus HOM05D006573 ORTHO05D008073 4.4e-147 525.4 370 71.9
SalBow1G2715 Salvia bowleyana HOM05D006573 ORTHO05D008073 5.8e-147 525.0 364 75.5
vmacro12852 Vaccinium macrocarpon HOM05D006573 ORTHO05D008073 5.8e-147 525.0 459 59.9
SalBow1G0293 Salvia bowleyana HOM05D006573 ORTHO05D008073 2.2e-146 523.1 364 75.3
CsaV3_2G010250 Cucumis sativus L. HOM05D006573 ORTHO05D008073 8.4e-146 521.2 315 76.2
MELO3C008677.2 Cucumis melo HOM05D006573 ORTHO05D008073 1.1e-145 520.8 315 75.9
ClCG11G010060 Citrullus lanatus HOM05D006573 ORTHO05D008073 1.9e-145 520.0 304 78.6
Sed0012720 Sechium edule HOM05D006573 ORTHO05D008073 3.5e-144 515.8 402 68.2
SEGI_03231 Sequoiadendron giganteum HOM05D006573 ORTHO05D008073 4.6e-144 515.4 384 67.4
Rhsim10G0138000 Rhododendron simsii HOM05D006573 ORTHO05D008073 6.4e-138 495.0 389 63.8
COL.COLO4_20557 Corchorus olitorius HOM05D006573 ORTHO05D008073 1.0e-135 487.6 287 78.7
Mapoly0111s0023 Marchantia polymorpha HOM05D006573 ORTHO05D008073 1.1e-134 484.2 369 63.4
AagrBONN_evm.TU.Sc2ySwM_228.1660 Anthoceros agrestis HOM05D006573 ORTHO05D008073 2.6e-131 473.0 369 64.8
CBR_g38554 Chara braunii HOM05D006573 ORTHO05D008073 7.6e-123 444.9 357 60.2
SMO270G0104 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 2.9e-122 443.0 340 61.2
Pp3c3_13220 Physcomitrium patens HOM05D006573 ORTHO05D008073 2.1e-120 436.8 407 54.8
CDE05G0621 Ceratophyllum demersum HOM05D006573 ORTHO05D008073 1.5e-110 404.1 245 76.3
SEGI_19143 Sequoiadendron giganteum HOM05D006573 ORTHO05D008073 5.7e-110 402.1 281 64.4
Os04g0379700 Oryza sativa ssp. japonica HOM05D006573 ORTHO05D008073 6.1e-96 355.5 245 67.8
Hma1.2p1_0123F.1_g058020 Hydrangea macrophylla HOM05D006573 ORTHO05D008073 6.7e-95 352.1 198 80.8
unitig_46.g17980 Utricularia gibba HOM05D006573 ORTHO05D008073 5.0e-90 335.9 194 78.9
Lj2C408T2 Lonicera japonica HOM05D006573 ORTHO05D008073 7.2e-89 332.0 365 51.8
PGSC0003DMG400010690 Solanum tuberosum HOM05D006573 ORTHO05D008073 3.3e-78 296.6 230 62.6
PRCOL_00001224 Prasinoderma coloniale HOM05D006573 ORTHO05D008073 3.0e-71 273.5 296 46.6
SMO297G0027 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 2.6e-70 270.4 205 57.6
SMO334G0031 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 2.6e-70 270.4 205 57.6
SMO297G0014 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 4.4e-70 269.6 205 57.6
SMO270G0143 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 2.4e-68 263.8 205 56.1
MCO16G084 Micromonas commoda HOM05D006573 ORTHO05D008073 1.2e-67 261.5 284 44.7
PGSC0003DMG400020993 Solanum tuberosum HOM05D006573 ORTHO05D008073 6.8e-55 219.2 211 54.0
unitig_46.g17981 Utricularia gibba HOM05D006573 ORTHO05D008073 3.4e-38 163.7 141 65.2
SMO266G0012 Selaginella moellendorffii HOM05D006573 ORTHO05D008073 3.6e-32 143.7 99 60.6
Haze_04503 Corylus avellana HOM05D006573 ORTHO05D008073 8.4e-13 79.3 93 50.5
AagrBONN_evm.TU.Sc2ySwM_344.2769 Anthoceros agrestis HOM05D006367 ORTHO05D007942 1.0e-10 72.4 265 23.4
THA.LOC104807726 Tarenaya hassleriana HOM05D006367 ORTHO05D007942 3.0e-10 70.9 281 22.1
Nn5g28853 Nelumbo nucifera HOM05D006367 ORTHO05D007942 3.9e-10 70.5 270 21.9
AUR62040525 Chenopodium quinoa HOM05D006367 ORTHO05D007942 8.7e-10 69.3 268 20.5
Ah.15g092040 Amaranthus hybridus HOM05D006367 ORTHO05D007942 1.1e-09 68.9 233 22.7
AUR62039784 Chenopodium quinoa HOM05D006367 ORTHO05D007942 2.5e-09 67.8 249 20.5
ATR1120G154 Amborella trichopoda HOM05D006367 ORTHO05D007942 3.3e-09 67.4 271 22.5
EL10Ac7g17324 Beta vulgaris HOM05D006367 ORTHO05D007942 3.3e-09 67.4 244 20.9
Pp3c8_810 Physcomitrium patens HOM05D006367 ORTHO05D007942 4.3e-09 67.0 279 22.6
Haze_04505 Corylus avellana HOM05D006573 ORTHO05D008073 5.6e-09 66.6 93 46.2
CDE04G0187 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 1.4e-07 62.0 134 24.6
QL93p0249_0008 Quercus lobata HOM05D006573 ORTHO05D008073 2.4e-07 61.2 61 52.5
Migut.H02447 Erythranthe guttata HOM05D006367 ORTHO05D007942 4.0e-07 60.5 134 22.4
Lj4P863T60 Lonicera japonica HOM05D006367 ORTHO05D007942 4.0e-07 60.5 132 23.5


User provided reference genes

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