Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 3.1e-50 202.6 103 100.0
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 3.1e-42 176.0 107 87.9
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 2.9e-40 169.5 103 88.3
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 5.0e-40 168.7 103 85.4
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 7.3e-39 164.9 104 85.6
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 4.7e-38 162.2 107 83.2
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 1.4e-34 150.6 105 80.0
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 9.2e-34 147.9 105 79.0
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 5.9e-33 145.2 103 76.7
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 3.0e-32 142.9 103 76.7
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 3.0e-32 142.9 103 76.7
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 3.0e-32 142.9 103 76.7
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 4.7e-30 135.6 103 73.8
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 1.8e-29 133.7 105 74.3
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 3.1e-29 132.9 103 71.8
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 5.2e-29 132.1 103 69.9
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 8.9e-29 131.3 99 72.7
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 1.2e-28 131.0 103 71.8
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 4.4e-28 129.0 98 71.4
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 5.8e-28 128.6 103 68.0
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 5.8e-28 128.6 103 69.9
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 9.8e-28 127.9 66 95.5
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 1.3e-27 127.5 103 67.0
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 1.3e-27 127.5 106 68.9
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 2.2e-27 126.7 104 67.3
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 2.2e-27 126.7 104 67.3
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 2.2e-27 126.7 103 66.0
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 2.9e-27 126.3 100 68.0
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 3.7e-27 125.9 103 67.0
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 1.1e-26 124.4 103 66.0
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 1.1e-26 124.4 103 66.0
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 1.4e-26 124.0 104 66.3
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 1.9e-26 123.6 105 68.6
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 4.1e-26 122.5 103 65.0
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 4.1e-26 122.5 100 68.0
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 7.0e-26 121.7 103 66.0
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 1.2e-25 120.9 102 65.7
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 1.2e-25 120.9 103 67.0
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 1.6e-25 120.6 100 64.0
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 1.6e-25 120.6 102 65.7
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 1.6e-25 120.6 102 66.7
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 2.0e-25 120.2 62 95.2
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 2.0e-25 120.2 62 95.2
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 2.7e-25 119.8 105 65.7
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 3.5e-25 119.4 109 62.4
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 3.5e-25 119.4 103 63.1
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 1.0e-24 117.9 101 65.3
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 1.3e-24 117.5 70 85.7
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 2.3e-24 116.7 106 63.2
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 3.0e-24 116.3 103 64.1
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 3.9e-24 115.9 66 89.4
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 5.0e-24 115.5 100 66.0
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 6.6e-24 115.2 63 87.3
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 6.6e-24 115.2 103 63.1
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 6.6e-24 115.2 104 62.5
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 6.6e-24 115.2 103 64.1
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 8.6e-24 114.8 100 63.0
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 8.6e-24 114.8 104 62.5
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 1.1e-23 114.4 103 63.1
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 2.5e-23 113.2 103 62.1
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 2.5e-23 113.2 70 81.4
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 3.3e-23 112.8 95 64.2
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 5.6e-23 112.1 103 60.2
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 5.6e-23 112.1 92 65.2
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 7.3e-23 111.7 74 77.0
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 7.3e-23 111.7 101 63.4
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 7.3e-23 111.7 98 64.3
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 7.3e-23 111.7 102 58.8
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 1.6e-22 110.5 109 58.7
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 2.1e-22 110.2 63 85.7
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 2.1e-22 110.2 103 62.1
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 4.7e-22 109.0 103 58.3
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 6.2e-22 108.6 70 75.7
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 6.2e-22 108.6 63 81.0
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 2.3e-21 106.7 64 84.4
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 5.2e-21 105.5 100 62.0
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 6.8e-21 105.1 103 59.2
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 8.9e-21 104.8 93 63.4
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 8.9e-21 104.8 103 58.3
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 1.2e-20 104.4 53 92.5
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.2e-20 104.4 104 56.7
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 1.2e-20 104.4 63 79.4
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 1.5e-20 104.0 59 83.1
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 2.6e-20 103.2 99 56.6
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 4.4e-20 102.4 63 77.8
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 4.4e-20 102.4 55 87.3
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 5.8e-20 102.1 103 57.3
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 6.4e-19 98.6 89 61.8
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 3.5e-17 92.8 66 68.2
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.7e-16 90.5 89 56.2
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 2.5e-15 86.7 100 51.0
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 2.5e-15 86.7 103 52.4
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 7.3e-15 85.1 100 52.0
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 1.4e-13 80.9 89 50.6
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 2.7e-09 66.6 59 55.9


User provided reference genes

Program Settings