Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G29650 Arabidopsis lyrata HOM05D017374 ORTHO05D018424 2.1e-132 475.7 240 100.0
AT5G54340 Arabidopsis thaliana HOM05D017374 ORTHO05D018424 2.0e-87 326.2 251 77.3
AL8G29770 Arabidopsis lyrata HOM05D017374 ORTHO05D018424 1.9e-61 240.0 230 67.8
Carub.0008s1467 Capsella rubella HOM05D017374 ORTHO05D018424 2.2e-17 93.6 74 66.2
AT5G54360 Arabidopsis thaliana HOM05D017374 ORTHO05D018424 1.2e-15 87.8 243 35.4
Carub.0008s1468 Capsella rubella HOM05D017374 ORTHO05D018424 4.8e-12 75.9 267 28.8
A06p37240 Brassica napus HOM05D008496 ORTHO05D010729 1.3e-09 67.8 105 43.8
C07p41230 Brassica napus HOM05D008496 ORTHO05D010729 1.3e-09 67.8 104 44.2
BolC7t44648H Brassica oleracea HOM05D008496 ORTHO05D010729 1.3e-09 67.8 104 44.2
BraA06t26648Z Brassica rapa HOM05D008496 ORTHO05D010729 1.3e-09 67.8 105 43.8
Sp2g21000 Schrenkiella parvula HOM05D008496 ORTHO05D010729 2.9e-09 66.6 178 32.0
Carub.0006s2470 Capsella rubella HOM05D008496 ORTHO05D010729 1.1e-08 64.7 108 38.9
BcaB07g34208 Brassica carinata HOM05D008496 ORTHO05D010729 1.4e-08 64.3 106 38.7
A02p38800 Brassica napus HOM05D008496 ORTHO05D010729 2.5e-08 63.5 102 36.3
BraA02t08856Z Brassica rapa HOM05D008496 ORTHO05D010729 2.5e-08 63.5 102 36.3
A03p14690 Brassica napus HOM05D016277 ORTHO05D014491 4.2e-08 62.8 260 30.8
BraA03t10760Z Brassica rapa HOM05D016277 ORTHO05D014491 4.2e-08 62.8 260 30.8
BcaC03g17812 Brassica carinata HOM05D008496 ORTHO05D010729 7.2e-08 62.0 102 35.3
C02p58360 Brassica napus HOM05D008496 ORTHO05D010729 7.2e-08 62.0 102 35.3
BolC2t11900H Brassica oleracea HOM05D008496 ORTHO05D010729 7.2e-08 62.0 102 35.3
CARHR292330 Cardamine hirsuta HOM05D008496 ORTHO05D010729 7.2e-08 62.0 78 41.0
CARHR292220 Cardamine hirsuta HOM05D008496 ORTHO05D010729 2.1e-07 60.5 71 43.7
CARHR183000 Cardamine hirsuta HOM05D008496 ORTHO05D010729 2.7e-07 60.1 181 32.0
CARHR186360 Cardamine hirsuta HOM05D008496 ORTHO05D010729 2.7e-07 60.1 106 36.8
AT5G54350 Arabidopsis thaliana HOM05D017374 ORTHO05D018424 6.1e-07 58.9 179 34.6
Thhalv10005521m.g Eutrema salsugineum HOM05D008496 ORTHO05D010729 6.1e-07 58.9 104 38.5
AT5G27880 Arabidopsis thaliana HOM05D008496 ORTHO05D010729 1.0e-06 58.2 141 31.2
BcaNung04743 Brassica carinata HOM05D008496 ORTHO05D010729 1.0e-06 58.2 105 39.0
Sp6g16360 Schrenkiella parvula HOM05D016277 ORTHO05D014491 1.8e-06 57.4 369 27.9
AL6G39050 Arabidopsis lyrata HOM05D008496 ORTHO05D010729 2.3e-06 57.0 108 34.3
BcaB01g04293 Brassica carinata HOM05D016277 ORTHO05D014491 2.3e-06 57.0 158 32.9
CARHR266170 Cardamine hirsuta HOM05D008496 ORTHO05D010729 3.9e-06 56.2 107 38.3
Thhalv10015921m.g Eutrema salsugineum HOM05D016277 ORTHO05D014491 3.9e-06 56.2 110 39.1
BcaC01g06303 Brassica carinata HOM05D016277 ORTHO05D014491 6.7e-06 55.5 65 47.7


User provided reference genes

Program Settings