Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 3.3e-181 638.3 326 100.0
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 5.6e-173 610.9 326 95.1
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 8.7e-166 587.0 324 92.3
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 8.2e-164 580.5 326 91.7
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 7.6e-162 573.9 324 89.8
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 5.7e-157 557.8 318 88.7
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 2.8e-156 555.4 318 88.4
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.8e-155 552.7 318 87.7
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 3.4e-154 548.5 321 86.6
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 1.8e-150 536.2 323 85.1
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 5.1e-150 534.6 305 89.5
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 2.2e-145 519.2 304 86.8
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 6.7e-142 507.7 320 80.0
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 1.1e-123 447.2 320 70.0
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 4.5e-122 441.8 317 70.3
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 1.3e-121 440.3 322 67.7
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 5.0e-121 438.3 322 68.0
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 1.1e-120 437.2 315 70.2
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 7.2e-120 434.5 323 68.7
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 7.2e-120 434.5 322 67.7
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 8.0e-119 431.0 322 67.4
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 8.0e-119 431.0 323 69.0
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 1.0e-118 430.6 323 68.4
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.4e-118 430.3 324 68.2
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.8e-118 429.9 324 68.2
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.3e-118 429.5 322 66.5
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 3.0e-118 429.1 317 68.8
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 3.0e-118 429.1 318 70.8
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 5.2e-118 428.3 322 67.1
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 5.2e-118 428.3 322 66.5
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 6.8e-118 427.9 322 67.1
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 8.8e-118 427.6 317 68.1
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 1.2e-117 427.2 312 69.2
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.6e-117 426.0 322 66.5
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 2.6e-117 426.0 316 68.4
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 2.6e-117 426.0 320 67.8
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 5.7e-117 424.9 317 69.7
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 1.7e-116 423.3 323 65.6
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 2.2e-116 422.9 320 65.9
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 2.8e-116 422.5 321 65.7
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 8.3e-116 421.0 317 65.9
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 2.4e-115 419.5 320 66.6
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 4.1e-115 418.7 318 69.5
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 7.0e-115 417.9 325 64.6
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 2.7e-114 416.0 320 66.9
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 4.5e-114 415.2 322 65.8
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 4.5e-114 415.2 322 65.2
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 7.3e-112 407.9 323 64.1
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 3.6e-111 405.6 319 65.5
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 1.8e-110 403.3 321 65.1
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 4.0e-110 402.1 322 62.4
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.2e-109 400.6 321 60.4
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.2e-109 400.6 321 60.4
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 1.5e-109 400.2 317 61.2
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 8.3e-108 394.4 317 64.4
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 1.1e-107 394.0 318 63.5
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 1.8e-107 393.3 317 59.9
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 3.2e-107 392.5 317 62.8
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 9.2e-107 391.0 317 59.3
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 1.6e-106 390.2 321 62.9
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 1.6e-106 390.2 322 63.7
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 2.0e-106 389.8 320 62.5
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 1.1e-104 384.0 316 62.3
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.1e-104 384.0 316 62.3
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 1.5e-104 383.6 299 63.2
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 2.3e-102 376.3 321 60.1
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 3.1e-102 375.9 319 58.6
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 3.1e-102 375.9 319 58.6
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 2.6e-101 372.9 316 58.5
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 1.3e-100 370.5 317 61.2
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 2.9e-100 369.4 316 60.8
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.1e-99 367.5 323 57.9
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 6.0e-98 361.7 191 94.2
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 6.0e-98 361.7 271 63.5
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 3.9e-97 359.0 320 55.6
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 6.6e-97 358.2 320 60.0
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 1.6e-95 353.6 320 56.6
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.6e-95 353.6 289 59.5
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 1.4e-94 350.5 317 56.5
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 5.2e-94 348.6 321 55.8
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 3.4e-93 345.9 265 66.8
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 3.4e-93 345.9 320 55.3
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 4.4e-93 345.5 316 55.1
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 2.4e-91 339.7 318 55.7
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 2.7e-90 336.3 325 56.9
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 8.6e-89 331.3 323 53.9
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 2.6e-85 319.7 323 52.9
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 2.2e-84 316.6 238 62.6
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 1.9e-80 303.5 324 50.9
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 4.0e-78 295.8 320 51.9
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 2.6e-77 293.1 320 49.7
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 8.4e-76 288.1 316 48.4
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 1.9e-75 287.0 324 50.6
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 4.6e-74 282.3 261 54.4
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 2.3e-73 280.0 331 48.0
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 9.6e-72 274.6 284 53.5
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 2.1e-66 256.9 318 43.4
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 2.1e-63 246.9 174 71.3
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 3.7e-63 246.1 326 43.6
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 6.0e-58 228.8 228 53.9
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 1.9e-56 223.8 203 54.7
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 2.9e-52 209.9 159 65.4
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 3.8e-52 209.5 202 53.0
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 2.1e-42 177.2 252 41.7
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.7e-34 150.2 110 63.6
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.4e-33 147.9 110 63.6
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 2.8e-31 140.2 270 32.6
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 5.5e-27 125.9 86 70.9
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 3.5e-21 106.7 120 46.7
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 5.9e-21 105.9 110 54.5
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 4.7e-10 69.7 66 57.6
MCO05G070 Micromonas commoda HOM05D002465 ORTHO05D008860 4.0e-09 66.6 247 25.1


User provided reference genes

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