Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 2.0e-74 282.3 145 100.0
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 2.3e-73 278.9 145 97.9
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 2.3e-73 278.9 145 97.9
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 1.5e-72 276.2 145 97.2
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 1.5e-72 276.2 145 97.2
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 2.5e-72 275.4 145 96.6
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 2.5e-72 275.4 145 95.2
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 3.3e-72 275.0 145 95.2
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 3.3e-72 275.0 145 96.6
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 4.3e-72 274.6 145 95.2
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 5.6e-72 274.2 145 95.9
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 9.5e-72 273.5 145 95.2
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 2.8e-71 271.9 145 94.5
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 8.0e-71 270.4 145 93.1
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 5.2e-70 267.7 145 94.5
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 6.8e-70 267.3 145 93.8
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 4.4e-69 264.6 145 93.1
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 1.7e-68 262.7 145 92.4
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 1.7e-68 262.7 145 92.4
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 1.7e-68 262.7 145 92.4
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 1.7e-68 262.7 145 92.4
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 1.7e-68 262.7 145 92.4
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.9e-67 259.2 145 90.3
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 1.5e-64 249.6 145 86.9
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 7.3e-64 247.3 145 87.6
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 1.1e-62 243.4 145 84.1
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 1.8e-62 242.7 145 85.5
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 3.1e-62 241.9 145 84.8
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 4.0e-62 241.5 145 84.1
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 5.2e-62 241.1 146 84.2
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 1.5e-61 239.6 145 84.1
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 4.4e-61 238.0 143 82.5
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 4.4e-61 238.0 143 82.5
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 4.4e-61 238.0 146 84.9
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 5.8e-61 237.7 145 83.4
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 9.9e-61 236.9 145 82.8
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 1.3e-60 236.5 158 79.1
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 1.1e-59 233.4 145 80.7
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 1.4e-59 233.0 134 86.6
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 1.9e-59 232.6 145 82.8
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 2.4e-59 232.3 143 81.8
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 2.4e-59 232.3 145 82.1
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 2.4e-59 232.3 145 82.8
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 3.2e-59 231.9 145 81.4
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 4.1e-59 231.5 145 79.3
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 4.1e-59 231.5 145 82.1
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 5.4e-59 231.1 145 81.4
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 5.4e-59 231.1 145 81.4
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 7.1e-59 230.7 145 83.4
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 1.2e-58 229.9 145 82.8
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 1.2e-58 229.9 143 81.8
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 1.6e-58 229.6 132 87.1
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.6e-58 229.6 145 80.7
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 1.6e-58 229.6 142 81.7
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 1.6e-58 229.6 147 78.9
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 1.6e-58 229.6 146 80.8
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 3.5e-58 228.4 132 85.6
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 3.5e-58 228.4 146 80.1
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 3.5e-58 228.4 141 80.1
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 4.6e-58 228.0 147 80.3
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 7.8e-58 227.3 147 78.9
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 7.8e-58 227.3 145 80.7
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 1.0e-57 226.9 144 81.9
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 1.3e-57 226.5 145 83.4
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.3e-57 226.5 146 81.5
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 1.7e-57 226.1 147 80.3
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 2.3e-57 225.7 147 81.0
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 5.1e-57 224.6 146 80.8
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 5.1e-57 224.6 146 80.8
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 5.1e-57 224.6 143 80.4
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 8.6e-57 223.8 145 81.4
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.3e-56 221.9 146 79.5
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 4.3e-56 221.5 146 79.5
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 7.3e-56 220.7 145 77.9
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 7.3e-56 220.7 146 80.1
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 7.3e-56 220.7 142 80.3
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 1.6e-55 219.5 146 80.1
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 1.6e-55 219.5 145 80.0
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 2.1e-55 219.2 130 83.8
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 2.8e-55 218.8 130 84.6
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 8.1e-55 217.2 147 79.6
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 5.2e-54 214.5 147 78.9
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 6.8e-54 214.2 147 77.6
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 8.9e-54 213.8 145 80.7
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 1.5e-53 213.0 147 78.2
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 2.0e-53 212.6 146 78.1
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 2.0e-53 212.6 147 78.9
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 3.4e-53 211.8 145 77.2
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 3.4e-53 211.8 147 76.9
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 3.4e-53 211.8 147 80.3
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 7.6e-53 210.7 145 76.6
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 1.3e-52 209.9 123 83.7
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 1.3e-52 209.9 145 76.6
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.7e-52 209.5 145 75.9
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 1.7e-52 209.5 146 76.7
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 4.9e-52 208.0 147 76.9
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 4.9e-52 208.0 145 75.2
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 4.9e-52 208.0 146 77.4
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 6.4e-52 207.6 145 77.9
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 8.4e-52 207.2 147 74.8
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.9e-51 206.1 147 77.6
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 1.9e-51 206.1 153 73.9
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 2.4e-51 205.7 147 76.2
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 3.2e-51 205.3 147 76.2
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 3.2e-51 205.3 147 76.9
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 4.1e-51 204.9 146 76.0
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 5.4e-51 204.5 136 80.9
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 7.1e-51 204.1 146 76.7
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 9.2e-51 203.8 146 76.7
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 9.2e-51 203.8 146 76.7
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 1.2e-50 203.4 145 75.9
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 2.7e-50 202.2 144 76.4
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 3.5e-50 201.8 143 76.2
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 3.5e-50 201.8 146 76.7
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 4.6e-50 201.4 147 74.8
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 1.3e-49 199.9 201 58.2
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 2.3e-49 199.1 148 74.3
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.9e-49 198.4 146 73.3
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 3.9e-49 198.4 146 73.3
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.1e-48 196.8 133 79.7
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 1.5e-48 196.4 145 74.5
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 1.5e-48 196.4 145 74.5
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 1.5e-48 196.4 145 74.5
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 1.9e-48 196.1 128 78.9
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 2.5e-48 195.7 144 74.3
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 3.3e-48 195.3 148 73.0
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 4.3e-48 194.9 145 73.8
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 5.6e-48 194.5 146 72.6
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 7.3e-48 194.1 147 72.8
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 1.2e-47 193.4 144 73.6
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 8.1e-47 190.7 151 70.9
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 1.4e-46 189.9 183 61.7
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 2.0e-45 186.0 145 70.3
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 2.6e-45 185.7 168 61.9
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 4.4e-45 184.9 121 82.6
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 3.2e-43 178.7 143 69.9
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 3.2e-43 178.7 145 68.3
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 5.4e-43 177.9 145 69.0
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 5.4e-43 177.9 150 67.3
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 5.4e-43 177.9 145 69.7
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 1.6e-42 176.4 145 69.0
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 6.0e-42 174.5 146 69.2
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 1.7e-41 172.9 146 67.8
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 3.9e-41 171.8 145 66.2
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 1.9e-40 169.5 133 72.2
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 2.5e-40 169.1 95 86.3
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 4.3e-40 168.3 133 69.9
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 9.6e-40 167.2 143 69.9
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 2.1e-39 166.0 137 71.5
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 1.4e-38 163.3 123 78.0
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.8e-38 162.9 111 77.5
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 5.3e-38 161.4 123 74.0
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 9.0e-38 160.6 145 64.1
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 1.2e-37 160.2 91 84.6
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 1.5e-37 159.8 132 65.9
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 9.9e-37 157.1 128 73.4
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 6.4e-36 154.5 115 74.8
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 6.0e-34 147.9 123 69.9
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 3.3e-32 142.1 104 77.9
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 5.6e-32 141.4 98 73.5
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 3.7e-31 138.7 99 76.8
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 1.1e-30 137.1 82 78.0
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 1.5e-29 133.3 123 59.3
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 4.5e-29 131.7 143 53.8
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 3.8e-28 128.6 133 57.9
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 2.1e-26 122.9 101 73.3
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.0e-25 120.6 107 70.1
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 5.1e-25 118.2 69 79.7
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.5e-24 116.7 64 85.9
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 2.5e-24 115.9 123 61.0
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 2.5e-24 115.9 123 61.0
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 6.2e-23 111.3 82 69.5
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 2.4e-22 109.4 131 51.9
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 2.4e-22 109.4 145 49.7
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 3.1e-22 109.0 76 72.4
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 3.1e-22 109.0 77 71.4
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 5.3e-22 108.2 136 50.0
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 2.5e-19 99.4 98 57.1
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 3.5e-18 95.5 81 65.4
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 8.7e-17 90.9 45 88.9
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 5.3e-14 81.6 76 64.5
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.3e-09 66.2 35 94.3
AagrBONN_evm.TU.Sc2ySwM_362.1258 Anthoceros agrestis HOM05D003818 ORTHO05D004541 8.2e-07 57.8 98 45.9


User provided reference genes

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