Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 0.0e+00 1101.7 535 100.0
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 3.5e-297 1024.2 537 94.0
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 8.9e-293 1009.6 539 92.2
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 5.5e-274 947.2 535 88.0
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 2.5e-271 938.3 531 88.5
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 1.6e-270 935.6 543 86.0
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 1.5e-260 902.5 537 84.9
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 2.1e-257 892.1 537 84.7
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 2.3e-256 888.6 537 84.4
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 1.9e-255 885.6 537 84.2
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 4.3e-255 884.4 537 84.0
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 8.2e-254 880.2 543 83.4
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 3.2e-250 868.2 548 79.9
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 4.6e-249 864.4 524 81.5
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 1.1e-226 790.0 547 70.6
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 1.5e-226 789.6 529 71.5
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 8.0e-225 783.9 462 79.2
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.8e-224 782.7 547 70.0
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 8.8e-224 780.4 550 70.5
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 1.2e-223 780.0 486 74.9
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 1.2e-223 780.0 459 78.9
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.7e-222 776.2 520 72.3
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 2.8e-222 775.4 534 72.1
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 2.8e-222 775.4 464 78.2
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 3.7e-222 775.0 547 69.7
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 4.8e-222 774.6 520 72.3
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 4.8e-222 774.6 473 76.3
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 6.3e-222 774.2 473 76.3
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 8.3e-222 773.9 515 72.6
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 1.4e-221 773.1 468 76.7
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 2.4e-221 772.3 520 72.1
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 5.4e-221 771.2 468 76.3
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 5.4e-221 771.2 534 70.2
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 2.0e-220 769.2 470 77.2
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 1.0e-219 766.9 467 76.2
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 2.9e-219 765.4 528 69.3
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 3.8e-219 765.0 462 77.5
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 5.0e-219 764.6 547 69.3
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 8.5e-219 763.8 459 77.1
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 1.5e-218 763.1 453 79.0
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 2.5e-218 762.3 533 69.2
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 5.5e-218 761.1 481 74.4
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 7.2e-218 760.8 472 76.5
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 7.2e-218 760.8 483 73.7
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 9.5e-218 760.4 459 76.9
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 2.1e-217 759.2 459 76.9
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 6.1e-217 757.7 534 70.8
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 1.8e-216 756.1 464 77.2
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.8e-216 756.1 562 67.6
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 1.8e-216 756.1 468 75.2
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 2.3e-216 755.7 537 68.7
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 3.0e-216 755.4 467 75.4
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 4.0e-216 755.0 539 69.0
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 5.2e-216 754.6 560 66.8
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.2e-215 753.4 541 67.5
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 1.2e-215 753.4 459 75.8
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 1.2e-215 753.4 542 68.8
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 2.0e-215 752.7 459 76.0
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 2.6e-215 752.3 459 76.3
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 9.8e-215 750.4 538 68.2
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 1.7e-214 749.6 482 73.4
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 1.1e-213 746.9 459 75.2
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 1.8e-213 746.1 518 69.3
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 2.4e-213 745.7 553 66.7
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 3.1e-213 745.3 620 62.3
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 4.1e-213 745.0 492 71.5
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 9.2e-213 743.8 462 74.9
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 9.2e-213 743.8 547 67.3
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.2e-212 743.4 549 66.1
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 1.6e-212 743.0 507 69.6
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 2.0e-212 742.7 539 67.7
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 3.5e-212 741.9 460 75.2
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 4.5e-212 741.5 613 61.5
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 5.9e-212 741.1 462 74.0
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 5.9e-212 741.1 509 69.9
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 7.3e-210 734.2 459 75.8
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 9.5e-210 733.8 467 75.2
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 2.8e-209 732.3 514 69.6
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 8.0e-209 730.7 459 73.2
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 1.0e-208 730.3 472 73.3
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 1.0e-208 730.3 459 74.5
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 1.4e-208 729.9 511 70.3
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 1.4e-208 729.9 538 68.2
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 1.8e-208 729.6 534 66.9
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 5.2e-208 728.0 459 73.9
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 6.8e-208 727.6 529 68.4
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 3.4e-207 725.3 539 66.4
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 6.4e-206 721.1 472 72.0
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.8e-205 719.5 547 66.0
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 3.0e-203 712.2 437 74.6
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 1.5e-202 709.9 511 69.3
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 5.2e-200 701.4 506 68.0
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 1.1e-197 693.7 436 72.9
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 1.1e-197 693.7 527 65.7
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 2.4e-197 692.6 519 64.2
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 1.2e-196 690.3 492 67.7
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 8.6e-195 684.1 484 68.4
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 1.9e-194 682.9 620 57.3
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 7.3e-194 681.0 421 75.1
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 6.2e-193 677.9 421 74.8
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 5.2e-192 674.9 458 69.0
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 8.3e-190 667.5 471 68.6
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 5.2e-184 648.3 460 66.7
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 4.4e-183 645.2 467 69.4
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 5.8e-183 644.8 472 64.2
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 3.9e-179 632.1 437 67.5
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 1.4e-176 623.6 457 64.1
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 1.8e-176 623.2 462 63.4
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 4.4e-175 618.6 421 68.4
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 1.1e-173 614.0 458 62.2
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 5.4e-173 611.7 441 64.4
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 2.1e-169 599.7 458 61.4
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 4.5e-167 592.0 458 60.7
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 2.2e-166 589.7 463 61.3
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 4.2e-165 585.5 461 61.0
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 2.1e-164 583.2 453 60.5
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 1.0e-163 580.9 464 59.9
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 5.8e-159 565.1 459 61.9
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 2.9e-158 562.8 346 75.7
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 2.5e-154 549.7 473 57.3
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 3.1e-152 542.7 460 58.0
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 2.2e-137 493.4 354 67.5
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 8.5e-134 481.5 384 63.8
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 8.5e-126 454.9 508 48.4
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 5.5e-117 425.6 327 66.1
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 3.3e-114 416.4 316 66.5
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 7.5e-114 415.2 256 74.2
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 7.7e-111 405.2 421 47.5
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 8.9e-99 365.2 261 65.9
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 2.0e-90 337.4 382 51.3
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 4.6e-87 326.2 255 58.8
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 7.8e-87 325.5 267 65.2
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 7.3e-85 318.9 214 65.9
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 8.6e-78 295.4 248 58.1
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 2.6e-66 257.3 163 76.7
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 1.1e-53 215.3 162 63.6
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 2.6e-50 204.1 144 65.3
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 5.8e-42 176.4 156 59.6
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 9.3e-40 169.1 113 67.3
Cc06_g21090 Coffea canephora HOM05D004653 ORTHO05D006221 6.0e-39 166.4 100 81.0
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 9.6e-37 159.1 176 51.7
SEGI_12419 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 6.2e-36 156.4 91 76.9
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 7.6e-34 149.4 115 60.9
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 3.1e-27 127.5 129 50.4
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 3.8e-17 94.0 57 78.9
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 1.2e-15 89.0 113 45.1
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 1.2e-15 89.0 57 63.2
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 2.6e-13 81.3 52 84.6
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 2.6e-13 81.3 52 84.6
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 1.7e-12 78.6 56 76.8
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 1.6e-07 62.0 60 60.0


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