Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G13904 Arabidopsis lyrata HOM05D000005 ORTHO05D078968 9.1e-39 163.7 124 100.0
BcaC04g21784 Brassica carinata HOM05D000005 ORTHO05D011856 7.5e-17 90.9 110 76.4
BolC9t55629H Brassica oleracea HOM05D000005 ORTHO05D011856 7.5e-17 90.9 110 76.4
C09p27670 Brassica napus HOM05D000005 ORTHO05D011856 2.2e-16 89.4 110 66.4
BraA09t37765Z Brassica rapa HOM05D000005 ORTHO05D011856 3.7e-16 88.6 110 64.5
Thhalv10001152m.g Eutrema salsugineum HOM05D000005 ORTHO05D011856 1.8e-15 86.3 116 48.3
AL8G13930 Arabidopsis lyrata HOM05D000005 ORTHO05D011856 4.1e-15 85.1 123 61.0
Aa31LG9G7920 Aethionema arabicum HOM05D000005 ORTHO05D011856 1.3e-13 80.1 121 66.1
Carub.0008s0296 Capsella rubella HOM05D000005 ORTHO05D011856 6.5e-13 77.8 90 81.1
CARHR177320 Cardamine hirsuta HOM05D000005 ORTHO05D011856 1.6e-11 73.2 96 77.1
AL8G13620 Arabidopsis lyrata HOM05D000005 ORTHO05D010626 1.7e-08 63.2 43 69.8
CARHR177100 Cardamine hirsuta HOM05D000005 ORTHO05D010626 3.7e-08 62.0 43 65.1
AL8G13580 Arabidopsis lyrata HOM05D000005 ORTHO05D010626 8.3e-08 60.8 43 65.1
AT5G45210 Arabidopsis thaliana HOM05D000005 ORTHO05D011856 8.3e-08 60.8 44 72.7
CARHR177140 Cardamine hirsuta HOM05D000005 ORTHO05D010626 8.3e-08 60.8 43 67.4
Aa31LG9G7880 Aethionema arabicum HOM05D000005 ORTHO05D011856 1.4e-07 60.1 44 68.2
AT2G17050 Arabidopsis thaliana HOM05D000005 ORTHO05D023687 1.4e-07 60.1 43 60.5
CARHR177000 Cardamine hirsuta HOM05D000005 ORTHO05D010626 1.4e-07 60.1 43 67.4
CARHR226310 Cardamine hirsuta HOM05D000005 ORTHO05D015962 1.4e-07 60.1 43 65.1
BcaB03g12384 Brassica carinata HOM05D000005 ORTHO05D010626 1.8e-07 59.7 43 62.8
A08p22100 Brassica napus HOM05D000005 ORTHO05D010626 1.8e-07 59.7 44 63.6
C03p80310 Brassica napus HOM05D000005 ORTHO05D010626 1.8e-07 59.7 43 62.8
Sp6g06630 Schrenkiella parvula HOM05D000005 ORTHO05D015813 1.8e-07 59.7 43 62.8
Thhalv10001238m.g Eutrema salsugineum HOM05D000005 ORTHO05D011856 2.4e-07 59.3 44 65.9
AL8G14230 Arabidopsis lyrata HOM05D000005 ORTHO05D010626 3.1e-07 58.9 43 62.8
AL8G14370 Arabidopsis lyrata HOM05D000005 ORTHO05D010626 3.1e-07 58.9 43 62.8
AT5G45260 Arabidopsis thaliana HOM05D000005 ORTHO05D010626 4.1e-07 58.5 43 62.8
CARHR177300 Cardamine hirsuta HOM05D000005 ORTHO05D032088 4.1e-07 58.5 44 63.6
AT5G45050 Arabidopsis thaliana HOM05D000005 ORTHO05D010626 5.4e-07 58.2 43 62.8
BcaB08g34693 Brassica carinata HOM05D000005 ORTHO05D023687 5.4e-07 58.2 43 60.5
Carub.0008s0293 Capsella rubella HOM05D000005 ORTHO05D010626 5.4e-07 58.2 43 60.5
CARHR177640 Cardamine hirsuta HOM05D000005 ORTHO05D031400 5.4e-07 58.2 43 67.4
BolC7t43334H Brassica oleracea HOM05D000005 ORTHO05D011856 7.0e-07 57.8 44 65.9
C09p27590 Brassica napus HOM05D000005 ORTHO05D011856 1.2e-06 57.0 44 68.2
Aa31LG6G2090 Aethionema arabicum HOM05D000005 ORTHO05D011295 1.6e-06 56.6 43 65.1
AL378U10020 Arabidopsis lyrata HOM05D000005 ORTHO05D011856 1.6e-06 56.6 44 63.6
C01p13460 Brassica napus HOM05D000005 ORTHO05D011295 1.6e-06 56.6 43 65.1
BcaC01g02955 Brassica carinata HOM05D000005 ORTHO05D023687 2.0e-06 56.2 43 58.1
BcaC09g51403 Brassica carinata HOM05D000005 ORTHO05D011295 2.0e-06 56.2 43 65.1
A01p11410 Brassica napus HOM05D000005 ORTHO05D011295 2.0e-06 56.2 43 65.1
C03p57940 Brassica napus HOM05D000005 ORTHO05D023687 2.0e-06 56.2 43 58.1
BolC3t18067H Brassica oleracea HOM05D000005 ORTHO05D023687 2.0e-06 56.2 43 58.1
A03p51910 Brassica napus HOM05D000005 ORTHO05D011295 2.7e-06 55.8 43 62.8
C09p27560 Brassica napus HOM05D000005 ORTHO05D011856 2.7e-06 55.8 44 63.6
Sp2g10060 Schrenkiella parvula HOM05D000005 ORTHO05D011856 2.7e-06 55.8 44 63.6
Aa31LG9G7860 Aethionema arabicum HOM05D000005 ORTHO05D011856 3.5e-06 55.5 44 61.4
AL2G17260 Arabidopsis lyrata HOM05D000011 ORTHO05D011295 3.5e-06 55.5 43 62.8
BcaB05g23289 Brassica carinata HOM05D000005 ORTHO05D010626 3.5e-06 55.5 43 67.4
BcaB07g30901 Brassica carinata HOM05D000005 ORTHO05D010626 3.5e-06 55.5 44 56.8
C07p61550 Brassica napus HOM05D000005 ORTHO05D010626 3.5e-06 55.5 43 62.8
BolC7t46579H Brassica oleracea HOM05D000005 ORTHO05D010626 3.5e-06 55.5 43 62.8
AL8G13740 Arabidopsis lyrata HOM05D000005 ORTHO05D010626 4.5e-06 55.1 43 60.5
AL8G13880 Arabidopsis lyrata HOM05D000005 ORTHO05D011856 4.5e-06 55.1 44 63.6
BcaNung02557 Brassica carinata HOM05D000005 ORTHO05D015962 4.5e-06 55.1 43 60.5
A01p02600 Brassica napus HOM05D000005 ORTHO05D010626 4.5e-06 55.1 43 62.8
C07p50470 Brassica napus HOM05D000005 ORTHO05D015962 4.5e-06 55.1 43 60.5
BolC7t45543H Brassica oleracea HOM05D000005 ORTHO05D015962 4.5e-06 55.1 43 60.5
BraA01t00246Z Brassica rapa HOM05D000005 ORTHO05D010626 4.5e-06 55.1 43 62.8
BraA03t14279Z Brassica rapa HOM05D000005 ORTHO05D011295 4.5e-06 55.1 43 62.8
Carub.0007s0409 Capsella rubella HOM05D000005 ORTHO05D010626 4.5e-06 55.1 43 53.5
THA.LOC104811339 Tarenaya hassleriana HOM05D000005 ORTHO05D011295 4.5e-06 55.1 43 58.1
AL5G32000 Arabidopsis lyrata HOM05D000005 ORTHO05D019736 5.9e-06 54.7 43 60.5
Carub.0008s0326 Capsella rubella HOM05D000005 ORTHO05D010626 5.9e-06 54.7 43 60.5
CARHR161150 Cardamine hirsuta HOM05D000005 ORTHO05D019736 5.9e-06 54.7 40 65.0
CARHR177030 Cardamine hirsuta HOM05D000005 ORTHO05D010626 5.9e-06 54.7 43 58.1


User provided reference genes

Program Settings