Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G10020 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 1.0e-190 669.8 327 100.0
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 2.3e-129 466.1 254 89.8
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 6.1e-127 458.0 255 89.0
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 5.2e-126 454.9 255 88.2
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 7.8e-122 441.0 254 86.2
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 3.7e-116 422.2 250 85.2
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 3.7e-116 422.2 250 85.2
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 4.9e-116 421.8 255 81.2
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 6.0e-114 414.8 250 84.4
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 1.7e-113 413.3 254 83.1
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 9.5e-104 380.9 254 77.6
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 5.2e-94 348.6 253 69.2
Cpa.g.sc37.117 Carica papaya HOM05D000087 ORTHO05D005735 1.6e-74 283.9 265 55.5
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 4.3e-72 275.8 254 57.5
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 2.0e-69 266.9 255 53.7
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 7.6e-69 265.0 253 54.5
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 1.1e-67 261.2 255 53.7
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 1.1e-67 261.2 255 53.7
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 1.9e-67 260.4 253 54.5
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 9.3e-67 258.1 255 52.2
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 2.1e-66 256.9 251 54.2
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 4.6e-66 255.8 255 52.9
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 4.6e-66 255.8 253 53.0
Hma1.2p1_0198F.1_g085370 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 1.5e-64 250.8 253 53.0
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 7.4e-64 248.4 255 51.0
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 2.1e-63 246.9 255 52.5
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 6.2e-63 245.4 265 49.1
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 8.2e-63 245.0 255 49.8
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 2.4e-62 243.4 255 51.4
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 9.0e-62 241.5 253 52.2
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 2.0e-61 240.4 255 51.4
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.0e-61 240.4 255 51.4
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 4.5e-61 239.2 253 50.6
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 4.5e-61 239.2 253 51.8
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.3e-60 237.7 255 51.4
FAN18G0494 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.3e-60 237.7 329 44.1
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 2.2e-60 236.9 255 50.6
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 1.1e-59 234.6 254 51.6
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 1.1e-59 234.6 254 51.2
Glyma.06G181000 Glycine max HOM05D000087 ORTHO05D005735 1.4e-59 234.2 270 48.1
Potri.001G454200 Populus trichocarpa HOM05D000087 ORTHO05D005735 1.4e-59 234.2 253 51.0
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 3.2e-59 233.0 266 48.5
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 5.5e-59 232.3 253 48.6
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.2e-58 231.1 255 49.8
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 3.5e-58 229.6 271 48.7
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 4.6e-58 229.2 253 51.0
Ca_16291_v3 Cicer arietinum L. HOM05D000087 ORTHO05D005735 3.0e-57 226.5 271 48.3
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 1.1e-56 224.6 250 50.4
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 3.3e-56 223.0 253 48.6
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 4.3e-56 222.6 266 46.2
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 7.4e-56 221.9 272 44.5
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 3.7e-55 219.5 243 47.7
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 4.8e-55 219.2 253 47.4
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 6.3e-55 218.8 273 44.0
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 1.4e-54 217.6 249 47.8
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 1.2e-53 214.5 253 47.4
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 5.9e-53 212.2 307 41.0
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 5.9e-53 212.2 252 45.2
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 7.7e-53 211.8 255 47.8
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 2.9e-52 209.9 248 48.0
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 2.9e-52 209.9 248 44.8
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 1.4e-51 207.6 246 47.2
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 7.2e-51 205.3 241 47.3
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 9.4e-51 204.9 272 45.6
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 9.4e-51 204.9 259 46.3
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 7.9e-50 201.8 253 44.3
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 1.0e-49 201.4 246 45.9
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 1.0e-49 201.4 249 45.4
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 1.4e-49 201.1 255 45.5
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 1.4e-49 201.1 255 45.5
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 5.1e-49 199.1 255 43.1
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 2.8e-47 193.4 255 43.5
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 1.5e-45 187.6 241 44.4
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 1.7e-44 184.1 245 40.4
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 1.4e-43 181.0 273 39.6
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 2.5e-43 180.3 256 41.8
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 3.2e-43 179.9 226 45.1
Oeu019648.1 Olea europaea HOM05D000087 ORTHO05D005735 2.1e-42 177.2 239 44.4
Duzib084G1107 Durio zibethinus HOM05D000087 ORTHO05D005735 1.1e-40 171.4 255 41.2
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 2.6e-40 170.2 251 39.8
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 1.3e-39 167.9 269 37.9
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 1.8e-38 164.1 253 40.3
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 9.1e-38 161.8 253 37.9
HPP92_028198 Vanilla planifolia HOM05D000087 ORTHO05D005735 2.6e-37 160.2 245 38.8
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 3.5e-37 159.8 227 38.8
MD14G1142900 Malus domestica HOM05D000087 ORTHO05D005735 1.5e-32 144.4 112 65.2
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 1.5e-32 144.4 257 37.7
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 7.4e-32 142.1 255 33.7
vmacro08520 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 3.5e-29 133.3 215 38.1
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 1.0e-28 131.7 240 36.7
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 4.2e-27 126.3 240 34.6
COL.COLO4_10863 Corchorus olitorius HOM05D000087 ORTHO05D005735 2.3e-25 120.6 211 36.0
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 9.8e-24 115.2 112 57.1
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 8.3e-23 112.1 242 32.6
SalBow4G1355 Salvia bowleyana HOM05D000087 ORTHO05D005735 9.1e-22 108.6 150 37.3
CSS0025060 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 6.3e-15 85.9 123 42.3
MBI04_g04804_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 1.4e-14 84.7 99 48.5
MBI17_g33112_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 1.5e-11 74.7 58 56.9
SEGI_26806 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 1.5e-11 74.7 195 29.7
AUR62009162 Chenopodium quinoa HOM05D000087 ORTHO05D005735 1.2e-10 71.6 44 70.5
vmacro08519 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 3.6e-10 70.1 52 65.4
AL1G66070 Arabidopsis lyrata HOM05D000107 ORTHO05D000062 6.1e-10 69.3 61 57.4
BolC8t50055H Brassica oleracea HOM05D008309 ORTHO05D010308 8.0e-10 68.9 70 51.4
A04p20790 Brassica napus HOM05D008309 ORTHO05D010308 2.3e-09 67.4 70 50.0
BolC3t19893H Brassica oleracea HOM05D008309 ORTHO05D010308 2.3e-09 67.4 70 50.0
BraA04t17652Z Brassica rapa HOM05D008309 ORTHO05D010308 2.3e-09 67.4 70 50.0
A03p63400 Brassica napus HOM05D008309 ORTHO05D010308 3.0e-09 67.0 52 55.8
A09p53580 Brassica napus HOM05D008309 ORTHO05D010308 3.0e-09 67.0 70 50.0
C03p39230 Brassica napus HOM05D008309 ORTHO05D010308 3.0e-09 67.0 70 50.0
BraA04t17824Z Brassica rapa HOM05D008309 ORTHO05D010308 3.0e-09 67.0 52 55.8
BraA06t25453Z Brassica rapa HOM05D008309 ORTHO05D010308 3.0e-09 67.0 52 55.8
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 3.0e-09 67.0 70 50.0
A09p47040 Brassica napus HOM05D008309 ORTHO05D010308 4.0e-09 66.6 52 55.8
BolC7t46146H Brassica oleracea HOM05D008309 ORTHO05D010308 4.0e-09 66.6 52 55.8
BraA09t40169Z Brassica rapa HOM05D008309 ORTHO05D010308 4.0e-09 66.6 52 55.8
A01p27270 Brassica napus HOM05D008309 ORTHO05D010308 8.9e-09 65.5 45 57.8
A09p43070 Brassica napus HOM05D008309 ORTHO05D010308 8.9e-09 65.5 45 57.8
C02p19790 Brassica napus HOM05D008309 ORTHO05D010308 8.9e-09 65.5 70 48.6
BolC2t08113H Brassica oleracea HOM05D008309 ORTHO05D010308 8.9e-09 65.5 70 48.6
BraA01t02865Z Brassica rapa HOM05D008309 ORTHO05D010308 8.9e-09 65.5 45 57.8
BraA05t22683Z Brassica rapa HOM05D008309 ORTHO05D000062 8.9e-09 65.5 45 57.8
C04p50470 Brassica napus HOM05D008309 ORTHO05D010308 1.5e-08 64.7 52 53.8
BraA01t02998Z Brassica rapa HOM05D008309 ORTHO05D010308 2.6e-08 63.9 45 55.6
AT1G40087 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 3.4e-08 63.5 70 47.1
C01p25750 Brassica napus HOM05D008309 ORTHO05D010308 4.4e-08 63.2 52 51.9
BolC4t25321H Brassica oleracea HOM05D008309 ORTHO05D010308 5.7e-08 62.8 52 50.0
C01p31730 Brassica napus HOM05D001350 ORTHO05D001091 7.5e-08 62.4 45 53.3
BolC1t03108H Brassica oleracea HOM05D001350 ORTHO05D001091 7.5e-08 62.4 45 53.3
A09p31570 Brassica napus HOM05D008309 ORTHO05D010308 1.3e-07 61.6 51 54.9
BolC3t19382H Brassica oleracea HOM05D008309 ORTHO05D010308 1.3e-07 61.6 45 57.8
BolC1t02525H Brassica oleracea HOM05D008309 ORTHO05D010308 1.7e-07 61.2 52 50.0
C03p71000 Brassica napus HOM05D008309 ORTHO05D010308 3.7e-07 60.1 45 55.6
C05p49520 Brassica napus HOM05D008309 ORTHO05D010308 4.9e-07 59.7 43 60.5
BolC4t26644H Brassica oleracea HOM05D008309 ORTHO05D010308 4.9e-07 59.7 52 50.0
C04p37540 Brassica napus HOM05D000855 ORTHO05D002321 6.4e-07 59.3 52 48.1
C01p31680 Brassica napus HOM05D008309 ORTHO05D000062 8.3e-07 58.9 51 51.0
CBR_g3175 Chara braunii HOM05D000087 ORTHO05D005735 8.3e-07 58.9 84 40.5
A01p29020 Brassica napus HOM05D008309 ORTHO05D010308 1.1e-06 58.5 45 53.3
C07p56660 Brassica napus HOM05D008309 ORTHO05D010308 1.4e-06 58.2 52 51.9


User provided reference genes

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