Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL86U10030 Arabidopsis lyrata HOM05D000025 ORTHO05D079367 2.9e-26 121.3 70 100.0
AL7G42750 Arabidopsis lyrata HOM05D000025 ORTHO05D000040 3.6e-16 87.8 43 95.3
AT4G13770 Arabidopsis thaliana HOM05D000025 ORTHO05D000040 1.4e-15 85.9 43 93.0
BcaC02g09392 Brassica carinata HOM05D000025 ORTHO05D000040 5.2e-15 84.0 44 90.9
A04p08450 Brassica napus HOM05D000025 ORTHO05D000040 5.2e-15 84.0 44 90.9
C04p42160 Brassica napus HOM05D000025 ORTHO05D000040 5.2e-15 84.0 44 90.9
BolC4t25797H Brassica oleracea HOM05D000025 ORTHO05D000040 5.2e-15 84.0 44 90.9
BraA04t16535Z Brassica rapa HOM05D000025 ORTHO05D000040 1.5e-14 82.4 44 88.6
CARHR219650 Cardamine hirsuta HOM05D000025 ORTHO05D000040 7.4e-14 80.1 41 90.2
CARHR219550 Cardamine hirsuta HOM05D000025 ORTHO05D000040 1.3e-13 79.3 43 86.0
Carub.0007s2869 Capsella rubella HOM05D000025 ORTHO05D000040 1.7e-13 79.0 40 90.0
Thhalv10024982m.g Eutrema salsugineum HOM05D000025 ORTHO05D000040 1.7e-13 79.0 44 84.1
Sp7g11560 Schrenkiella parvula HOM05D000025 ORTHO05D000040 4.8e-13 77.4 41 85.4
BcaC02g07285 Brassica carinata HOM05D000025 ORTHO05D000040 1.1e-12 76.3 42 83.3
BcaC02g07287 Brassica carinata HOM05D000025 ORTHO05D000040 1.1e-12 76.3 42 83.3
A04p31860 Brassica napus HOM05D000025 ORTHO05D000040 1.1e-12 76.3 42 83.3
C04p69280 Brassica napus HOM05D000025 ORTHO05D000040 1.1e-12 76.3 42 83.3
BolC4t28428H Brassica oleracea HOM05D000025 ORTHO05D000040 1.1e-12 76.3 42 83.3
BraA04t18644Z Brassica rapa HOM05D000025 ORTHO05D000040 1.1e-12 76.3 42 83.3
BcaB02g08654 Brassica carinata HOM05D000025 ORTHO05D000040 1.8e-12 75.5 44 84.1
Sp7g11550 Schrenkiella parvula HOM05D000025 ORTHO05D000040 3.1e-12 74.7 42 83.3
BcaB06g29213 Brassica carinata HOM05D000025 ORTHO05D000040 5.3e-12 73.9 42 81.0
CARHR219630 Cardamine hirsuta HOM05D000025 ORTHO05D000040 7.0e-12 73.6 44 77.3
Aa31LG9G3850 Aethionema arabicum HOM05D000025 ORTHO05D000040 2.6e-11 71.6 41 80.5
Aa31LG9G3880 Aethionema arabicum HOM05D000025 ORTHO05D000040 1.0e-10 69.7 41 78.0
THA.LOC104813171 Tarenaya hassleriana HOM05D000025 ORTHO05D000040 3.2e-09 64.7 41 68.3
THA.LOC104806927 Tarenaya hassleriana HOM05D000025 ORTHO05D000040 2.7e-08 61.6 41 68.3
Cpa.g.sc26.241 Carica papaya HOM05D000025 ORTHO05D000040 3.0e-07 58.2 40 65.0
AL7G20560 Arabidopsis lyrata HOM05D000025 ORTHO05D000040 2.6e-06 55.1 40 60.0
AT4G31500 Arabidopsis thaliana HOM05D000025 ORTHO05D000040 2.6e-06 55.1 40 60.0
Carub.0007s0906 Capsella rubella HOM05D000025 ORTHO05D000040 2.6e-06 55.1 40 60.0
THA.LOC104806926 Tarenaya hassleriana HOM05D000025 ORTHO05D000040 3.3e-06 54.7 40 60.0
CARHR239400 Cardamine hirsuta HOM05D000025 ORTHO05D000040 4.4e-06 54.3 40 57.5
CARHR034820 Cardamine hirsuta HOM05D000025 ORTHO05D000040 7.5e-06 53.5 38 60.5
Sp1g31900 Schrenkiella parvula HOM05D000025 ORTHO05D000040 9.7e-06 53.1 39 59.0


User provided reference genes

Program Settings