Gene: AT4G31500
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G31500
- Transcript Identifier AT4G31500.1
- Gene Type Coding gene
- Location Chr4 : 15273677-15275271 : negative
Gene Family Information
- ID HOM05D000025
- #Genes/#Species 5827/97
- Phylogenetic origin
- ID ORTHO05D000040
- #Genes/#Species 3123/90
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G31500.1
- symbol CYP83B1
- Alias ATR4,ALTERED TRYPTOPHAN REGULATION 4,RED1,RED ELONGATED 1,RNT1,RUNT 1,SUR2,SUPERROOT 2
- full_name cytochrome P450%2C family 83%2C subfamily B%2C polypeptide 1
- uniprot B0ZUW1
Descriptions
- Description cytochrome P450, family 83, subfamily B, polypeptide 1
- Computational description cytochrome P450, family 83, subfamily B, polypeptide 1 (CYP83B1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 83, subfamily A, polypeptide 1 (TAIR:AT4G13770.1); Has 32513 Blast hits to 32256 proteins in 1630 species: Archae - 47; Bacteria - 2956; Metazoa - 11814; Fungi - 7162; Plants - 9504; Viruses - 6; Other Eukaryotes - 1024 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0052544 | IMP | Gene Ontology | defense response by callose deposition in cell wall | 1 |
GO:0010114 | IMP | Gene Ontology | response to red light | 2 |
GO:0009641 | IMP | Gene Ontology | shade avoidance | 2 |
GO:0050832 | IDA | Gene Ontology | defense response to fungus | 3 |
GO:0009682 | IEP | Gene Ontology | induced systemic resistance | 4 |
GO:0042742 | IMP | Gene Ontology | defense response to bacterium | 1 |
GO:0009625 | IEP | Gene Ontology | response to insect | 5 |
GO:0048830 | TAS | Gene Ontology | adventitious root development | 6 |
GO:0000162 | IMP | Gene Ontology | tryptophan biosynthetic process | 7 |
GO:0009759 | IDA | Gene Ontology | indole glucosinolate biosynthetic process | 8 |
GO:0009684 | IMP | Gene Ontology | indoleacetic acid biosynthetic process | 9 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0020037 | IEA | Gene Ontology | heme binding | |
GO:0020037 | IEA | InterPro | heme binding | |
GO:0016705 | IEA | GOA Database | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | |
GO:0016705 | IEA | InterPro | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | |
GO:0005506 | IEA | Gene Ontology | iron ion binding | |
GO:0005506 | IEA | InterPro | iron ion binding | |
GO:0004497 | IEA | GOA Database | monooxygenase activity | |
GO:0004497 | IEA | InterPro | monooxygenase activity | |
GO:0016709 | IDA | Gene Ontology | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 10 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005886 | HDA | Gene Ontology | plasma membrane | 11 |
GO:0005783 | HDA | Gene Ontology | endoplasmic reticulum | 12 |
GO:0005739 | HDA | Gene Ontology | mitochondrion | 13 |
GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
30.1.1.6.3 | Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.benzenic and indolic core structure.aldoxime oxidase |