Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G51690 Arabidopsis lyrata HOM05D007347 ORTHO05D009296 9.8e-115 418.3 343 100.0
Carub.0007s3713 Capsella rubella HOM05D007347 ORTHO05D009296 8.1e-101 372.1 343 93.3
AT5G38730 Arabidopsis thaliana HOM05D007347 ORTHO05D009296 4.0e-100 369.8 343 91.0
SpUn0124_0020 Schrenkiella parvula HOM05D007347 ORTHO05D009296 3.3e-94 350.1 343 89.2
SpUn0185_0030 Schrenkiella parvula HOM05D007347 ORTHO05D009296 3.3e-94 350.1 343 89.2
Thhalv10028323m.g Eutrema salsugineum HOM05D007347 ORTHO05D009296 1.2e-93 348.2 343 87.8
BraA04t16830Z Brassica rapa HOM05D007347 ORTHO05D009296 9.9e-91 338.6 343 88.0
A04p11620 Brassica napus HOM05D007347 ORTHO05D009296 1.1e-89 335.1 343 87.5
BcaC02g09666 Brassica carinata HOM05D007347 ORTHO05D009296 1.4e-89 334.7 343 86.3
C04p45350 Brassica napus HOM05D007347 ORTHO05D009296 1.4e-89 334.7 343 86.3
BolC4t26117H Brassica oleracea HOM05D007347 ORTHO05D009296 1.4e-89 334.7 343 86.3
BcaB06g27240 Brassica carinata HOM05D007347 ORTHO05D009296 5.1e-87 326.2 343 86.9
THA.LOC104805542 Tarenaya hassleriana HOM05D007347 ORTHO05D009296 2.1e-77 294.3 190 76.3
Aa31LG9G16920 Aethionema arabicum HOM05D007347 ORTHO05D009296 3.1e-76 290.4 183 79.2
Cc07_g04830 Coffea canephora HOM05D007347 ORTHO05D009296 9.4e-49 199.1 190 52.6
QL06p007153 Quercus lobata HOM05D007347 ORTHO05D009296 2.1e-48 198.0 190 52.1
Prupe.6G186200 Prunus persica HOM05D007347 ORTHO05D009296 7.9e-48 196.1 189 55.6
Migut.H00560 Erythranthe guttata HOM05D007347 ORTHO05D009296 1.0e-47 195.7 190 54.2
SGA_v2.0_scaffold204G41666 Striga asiatica HOM05D007347 ORTHO05D009296 8.8e-47 192.6 189 53.4
MELO3C026797.2 Cucumis melo HOM05D007347 ORTHO05D009296 2.6e-46 191.0 179 54.2
MD15G1324700 Malus domestica HOM05D007347 ORTHO05D009296 3.3e-46 190.7 189 54.5
Psat4g145840 Pisum sativum HOM05D007347 ORTHO05D009296 7.4e-46 189.5 178 55.6
RcHm_v2.0_Chr2g0114451 Rosa chinensis HOM05D007347 ORTHO05D009296 7.4e-46 189.5 181 56.4
FAN23G0923 Fragaria x ananassa HOM05D007347 ORTHO05D009296 9.7e-46 189.1 181 57.5
FAN26G2104 Fragaria x ananassa HOM05D007347 ORTHO05D009296 9.7e-46 189.1 181 57.5
ClCG11G001180 Citrullus lanatus HOM05D007347 ORTHO05D009296 1.7e-45 188.3 191 51.8
FvH4_1g20970 Fragaria vesca HOM05D007347 ORTHO05D009296 1.7e-45 188.3 181 56.9
FAN23G0930 Fragaria x ananassa HOM05D007347 ORTHO05D009296 2.2e-45 188.0 181 56.9
CSS0000287 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 4.8e-45 186.8 189 51.3
CSS0049471 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 4.8e-45 186.8 189 51.3
Lsat_1_v5_gn_2_86161 Lactuca sativa HOM05D007347 ORTHO05D009296 4.8e-45 186.8 190 53.2
TWI15G0869 Tripterygium wilfordii HOM05D007347 ORTHO05D009296 4.8e-45 186.8 188 54.3
Cpa.g.sc16.131 Carica papaya HOM05D007347 ORTHO05D009296 8.2e-45 186.0 178 52.8
RcHm_v2.0_Chr6g0269561 Rosa chinensis HOM05D007347 ORTHO05D009296 1.1e-44 185.7 181 55.2
CsaV3_5G013240 Cucumis sativus L. HOM05D007347 ORTHO05D009296 1.8e-44 184.9 178 52.8
FAN19G1358 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.8e-44 184.9 181 56.4
Lj4P128T51 Lonicera japonica HOM05D007347 ORTHO05D009296 3.1e-44 184.1 185 51.9
Medtr8g039270 Medicago truncatula HOM05D007347 ORTHO05D009296 3.1e-44 184.1 178 53.9
TPR.G30433 Trifolium pratense HOM05D007347 ORTHO05D009296 5.3e-44 183.3 174 54.0
Nitab4.5_0007154g0010 Nicotiana tabacum HOM05D007347 ORTHO05D009296 7.0e-44 183.0 189 50.8
Potri.017G108600 Populus trichocarpa HOM05D007347 ORTHO05D009296 7.0e-44 183.0 187 50.8
CANSAT64G0714 Cannabis sativa HOM05D007347 ORTHO05D009296 4.5e-43 180.3 192 51.0
HanXRQChr14g0448021 Helianthus annuus HOM05D007347 ORTHO05D009296 4.5e-43 180.3 191 53.4
CiPaw.03G007800 Carya illinoinensis HOM05D007347 ORTHO05D009296 7.7e-43 179.5 343 67.3
Peaxi162Scf00004g02628 Petunia axillaris HOM05D007347 ORTHO05D009296 7.7e-43 179.5 190 49.5
Actinidia18106 Actinidia chinensis HOM05D007347 ORTHO05D009296 1.0e-42 179.1 190 51.1
MSTRG.24902 Avicennia marina HOM05D007347 ORTHO05D009296 1.3e-42 178.7 184 52.2
Dinv34879 Davidia involucrata HOM05D007347 ORTHO05D009296 2.2e-42 177.9 190 51.6
Sopen04g021380 Solanum pennellii HOM05D007347 ORTHO05D009296 3.8e-42 177.2 190 49.5
Lj3g0007423 Lotus japonicus HOM05D007347 ORTHO05D009296 5.0e-42 176.8 174 54.6
Solyc04g050550.3 Solanum lycopersicum HOM05D007347 ORTHO05D009296 6.5e-42 176.4 190 49.5
Sabra17G0091200 Salix brachista HOM05D007347 ORTHO05D009296 1.4e-41 175.3 184 50.0
Lalb_Chr19g0132391 Lupinus albus HOM05D007347 ORTHO05D009296 5.5e-41 173.3 175 54.9
Hma1.2p1_1364F.1_g278380 Hydrangea macrophylla HOM05D007347 ORTHO05D009296 9.4e-41 172.6 181 50.3
CAN.G71.18 Capsicum annuum HOM05D007347 ORTHO05D009296 1.6e-40 171.8 188 49.5
Duzib138G0808 Durio zibethinus HOM05D007347 ORTHO05D009296 1.6e-40 171.8 180 53.3
Cfa007995 Carpinus fangiana HOM05D007347 ORTHO05D009296 2.1e-40 171.4 171 53.2
Thecc.04G145700 Theobroma cacao HOM05D007347 ORTHO05D009296 2.1e-40 171.4 189 50.3
Glyma.15G236300 Glycine max HOM05D007347 ORTHO05D009296 1.0e-39 169.1 175 53.7
Haze_14081 Corylus avellana HOM05D007347 ORTHO05D009296 1.4e-39 168.7 182 50.0
Glyma.13G197700 Glycine max HOM05D007347 ORTHO05D009296 5.2e-39 166.8 175 53.7
Gohir.D02G204900 Gossypium hirsutum HOM05D007347 ORTHO05D009296 5.2e-39 166.8 181 50.3
Gorai.005G232200 Gossypium raimondii HOM05D007347 ORTHO05D009296 5.2e-39 166.8 180 50.6
SalBow1G8225 Salvia bowleyana HOM05D007347 ORTHO05D009296 5.2e-39 166.8 184 46.7
VMungo1127G1072 Vigna mungo HOM05D007347 ORTHO05D009296 8.8e-39 166.0 166 54.8
Phvul.011G207300 Phaseolus vulgaris HOM05D007347 ORTHO05D009296 4.4e-38 163.7 166 53.6
Sed0006376 Sechium edule HOM05D007347 ORTHO05D009296 9.7e-38 162.5 191 47.1
Ciclev10011342m.g Citrus clementina HOM05D007347 ORTHO05D009296 1.7e-37 161.8 187 48.1
Gohir.A03G183300 Gossypium hirsutum HOM05D007347 ORTHO05D009296 2.2e-37 161.4 180 50.6
AUR62019500 Chenopodium quinoa HOM05D007347 ORTHO05D009296 4.8e-37 160.2 191 47.6
Eucgr.I02100 Eucalyptus grandis HOM05D007347 ORTHO05D009296 1.4e-36 158.7 169 51.5
Ah.16g102100 Amaranthus hybridus HOM05D007347 ORTHO05D009296 2.4e-36 157.9 190 45.3
PSO782G5207 Papaver somniferum HOM05D007347 ORTHO05D009296 2.4e-36 157.9 184 44.0
GSVIVG01036486001 Vitis vinifera HOM05D007347 ORTHO05D009296 1.2e-35 155.6 180 47.8
Manes.18G103700 Manihot esculenta HOM05D007347 ORTHO05D009296 1.6e-35 155.2 169 49.7
TAR371G0226 Trochodendron aralioides HOM05D007347 ORTHO05D009296 2.6e-35 154.5 189 41.8
TAR629G3514 Trochodendron aralioides HOM05D007347 ORTHO05D009296 2.6e-35 154.5 189 41.8
MBI03_g44527_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 4.5e-35 153.7 186 43.5
Nn3g18549 Nelumbo nucifera HOM05D007347 ORTHO05D009296 2.2e-34 151.4 184 43.5
Sc10g0001490 Simmondsia chinensis HOM05D007347 ORTHO05D009296 1.9e-33 148.3 190 43.2
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 8.0e-32 142.9 172 47.7
FAN28G0832 Fragaria x ananassa HOM05D007347 ORTHO05D009296 8.8e-31 139.4 144 55.6
Manes.02G063016 Manihot esculenta HOM05D002460 ORTHO05D002716 1.5e-30 138.7 171 46.2
ATR0124G035 Amborella trichopoda HOM05D007347 ORTHO05D009296 2.6e-30 137.9 190 40.0
ECA238G4434 Erigeron canadensis HOM05D007347 ORTHO05D009296 1.7e-29 135.2 105 66.7
Aqoxy3G04330 Aquilegia oxysepala HOM05D007347 ORTHO05D009296 6.3e-29 133.3 180 39.4
COL.COLO4_23655 Corchorus olitorius HOM05D007347 ORTHO05D009296 5.5e-25 120.2 105 60.0
Atru.chr10.1870 Acer truncatum HOM05D007347 ORTHO05D009296 3.4e-22 110.9 190 37.9
AUR62036136 Chenopodium quinoa HOM05D007347 ORTHO05D009296 2.4e-20 104.8 105 53.3
Ca_23964_v3 Cicer arietinum L. HOM05D007347 ORTHO05D009296 4.5e-19 100.5 85 58.8
MBI03_g13436_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 2.3e-18 98.2 101 49.5
CARHR283670 Cardamine hirsuta HOM05D007347 ORTHO05D009296 1.5e-09 68.9 36 88.9
Zm00001eb259350 Zea mays HOM05D007347 ORTHO05D009296 1.6e-08 65.5 163 33.1
CDE05G1387 Ceratophyllum demersum HOM05D007347 ORTHO05D009296 5.2e-07 60.5 49 51.0
CAN.G843.18 Capsicum annuum HOM05D005764 ORTHO05D006600 2.0e-06 58.5 170 30.0
Ah.11g046810 Amaranthus hybridus HOM05D005764 ORTHO05D006600 4.4e-06 57.4 169 27.2


User provided reference genes

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