Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G50110 Arabidopsis lyrata HOM05D007405 ORTHO05D009256 2.9e-118 430.3 681 100.0
AT5G39980 Arabidopsis thaliana HOM05D007405 ORTHO05D009256 9.5e-106 388.7 681 97.7
Sp7g02090 Schrenkiella parvula HOM05D007405 ORTHO05D009256 1.5e-87 328.2 685 93.4
BcaC08g44440 Brassica carinata HOM05D007405 ORTHO05D009256 3.2e-85 320.5 681 92.8
C06p18840 Brassica napus HOM05D007405 ORTHO05D009256 3.2e-85 320.5 681 92.8
BolC6t37089H Brassica oleracea HOM05D007405 ORTHO05D009256 3.2e-85 320.5 681 92.8
CARHR262150 Cardamine hirsuta HOM05D007405 ORTHO05D009256 1.3e-83 315.1 690 91.9
Carub.0007s3571 Capsella rubella HOM05D007405 ORTHO05D009256 9.6e-82 308.9 682 92.7
Thhalv10028245m.g Eutrema salsugineum HOM05D007405 ORTHO05D009256 4.8e-81 306.6 686 92.4
BraA07t29716Z Brassica rapa HOM05D007405 ORTHO05D009256 3.4e-79 300.4 682 91.9
A07p20170 Brassica napus HOM05D007405 ORTHO05D009256 2.7e-76 290.8 682 91.3
Aa31LG9G1630 Aethionema arabicum HOM05D000330 ORTHO05D009256 6.9e-72 276.2 684 89.2
BcaB02g07958 Brassica carinata HOM05D007405 ORTHO05D009256 1.1e-69 268.9 685 89.6
THA.LOC104823926 Tarenaya hassleriana HOM05D007405 ORTHO05D009256 7.4e-66 256.1 680 86.9
Cfa007501 Carpinus fangiana HOM05D007405 ORTHO05D009256 1.3e-54 218.8 675 80.6
Prupe.3G273600 Prunus persica HOM05D007405 ORTHO05D009256 1.7e-54 218.4 680 69.9
MD09G1044200 Malus domestica HOM05D007405 ORTHO05D009256 2.9e-54 217.6 568 84.2
QL02p079911 Quercus lobata HOM05D007405 ORTHO05D009256 3.2e-53 214.2 193 63.7
Haze_14594 Corylus avellana HOM05D007405 ORTHO05D009256 1.6e-52 211.8 672 83.0
CiPaw.04G020600 Carya illinoinensis HOM05D007405 ORTHO05D009256 7.4e-50 203.0 195 58.5
TWI56G0828 Tripterygium wilfordii HOM05D007405 ORTHO05D009256 1.6e-49 201.8 194 58.8
GSVIVG01032591001 Vitis vinifera HOM05D007405 ORTHO05D009256 2.2e-49 201.4 679 84.7
CANSAT64G0564 Cannabis sativa HOM05D007405 ORTHO05D009256 1.4e-48 198.7 564 82.3
ClCG10G014780 Citrullus lanatus HOM05D007405 ORTHO05D009256 1.4e-48 198.7 567 79.5
Potri.017G075700 Populus trichocarpa HOM05D007405 ORTHO05D009256 1.8e-48 198.4 567 82.9
Ciclev10011224m.g Citrus clementina HOM05D007405 ORTHO05D009256 2.4e-48 198.0 189 58.7
MELO3C009896.2 Cucumis melo HOM05D007405 ORTHO05D009256 3.1e-48 197.6 570 79.5
Sabra17G0067600 Salix brachista HOM05D007405 ORTHO05D009256 3.1e-48 197.6 567 82.9
CsaV3_3G041760 Cucumis sativus L. HOM05D007405 ORTHO05D009256 1.5e-47 195.3 573 78.5
Duzib147G0736 Durio zibethinus HOM05D007405 ORTHO05D009256 1.5e-47 195.3 186 57.0
Atru.chr8.2441 Acer truncatum HOM05D007405 ORTHO05D009256 7.7e-47 193.0 181 60.2
FAN14G0904 Fragaria x ananassa HOM05D007405 ORTHO05D009256 7.7e-47 193.0 564 82.8
FAN14G4765 Fragaria x ananassa HOM05D007405 ORTHO05D009256 7.7e-47 193.0 564 82.8
FAN09G1987 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.0e-46 192.6 565 83.0
FvH4_6g49520 Fragaria vesca HOM05D007405 ORTHO05D009256 2.9e-46 191.0 560 83.2
Thecc.04G073000 Theobroma cacao HOM05D007405 ORTHO05D009256 2.9e-46 191.0 182 58.8
Manes.17G025500 Manihot esculenta HOM05D007405 ORTHO05D009256 2.5e-45 188.0 191 56.0
EL10Ac2g02615 Beta vulgaris HOM05D007405 ORTHO05D009256 7.2e-45 186.4 524 81.9
CAN.G206.101 Capsicum annuum HOM05D007405 ORTHO05D009256 9.4e-45 186.0 158 65.8
FAN02G3519 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.6e-44 185.3 564 82.3
Lsat_1_v5_gn_2_90480 Lactuca sativa HOM05D007405 ORTHO05D009256 2.7e-44 184.5 189 53.4
Sed0003758 Sechium edule HOM05D007405 ORTHO05D009256 3.6e-44 184.1 197 55.3
Ah.10g031180 Amaranthus hybridus HOM05D007405 ORTHO05D009256 4.6e-44 183.7 524 82.4
Oeu027767.1 Olea europaea HOM05D007405 ORTHO05D009256 6.1e-44 183.3 656 80.3
Nitab4.5_0002265g0130 Nicotiana tabacum HOM05D007405 ORTHO05D009256 1.0e-43 182.6 189 55.0
RcHm_v2.0_Chr2g0169431 Rosa chinensis HOM05D007405 ORTHO05D009256 1.0e-43 182.6 506 86.6
FAN05G4748 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.4e-43 182.2 565 72.6
Gohir.A07G215301 Gossypium hirsutum HOM05D007405 ORTHO05D009256 1.4e-43 182.2 184 56.5
Gohir.D07G222200 Gossypium hirsutum HOM05D007405 ORTHO05D009256 1.4e-43 182.2 184 56.0
Gorai.001G256500 Gossypium raimondii HOM05D007405 ORTHO05D009256 1.4e-43 182.2 184 56.0
Sopen02g032330 Solanum pennellii HOM05D007405 ORTHO05D009256 5.1e-43 180.3 192 56.2
Migut.H00884 Erythranthe guttata HOM05D007405 ORTHO05D009256 8.8e-43 179.5 189 57.1
AUR62018305 Chenopodium quinoa HOM05D007405 ORTHO05D009256 1.1e-42 179.1 523 86.6
Solyc02g087560.1 Solanum lycopersicum HOM05D007405 ORTHO05D009256 1.5e-42 178.7 187 55.6
Dinv33696 Davidia involucrata HOM05D007405 ORTHO05D009256 3.3e-42 177.6 191 55.5
FAN02G3321 Fragaria x ananassa HOM05D007405 ORTHO05D009256 3.3e-42 177.6 188 54.3
PGR031G2628 Punica granatum HOM05D007405 ORTHO05D009256 5.7e-42 176.8 117 75.2
Lj6g0001930 Lotus japonicus HOM05D007405 ORTHO05D009256 7.4e-42 176.4 148 63.5
CSS0011088 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 9.7e-42 176.0 107 78.5
HanXRQChr14g0449381 Helianthus annuus HOM05D007405 ORTHO05D009256 1.7e-41 175.3 195 49.7
CSS0008879 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 2.2e-41 174.9 196 51.0
MSTRG.19401 Avicennia marina HOM05D007405 ORTHO05D009256 4.8e-41 173.7 170 57.1
DCAR_011169 Daucus carota HOM05D007405 ORTHO05D009256 8.2e-41 172.9 189 54.0
Cpa.g.sc14.54 Carica papaya HOM05D007405 ORTHO05D009256 1.1e-40 172.6 100 85.0
Cc07_g02870 Coffea canephora HOM05D007405 ORTHO05D009256 1.1e-40 172.6 476 87.4
AUR62030576 Chenopodium quinoa HOM05D007405 ORTHO05D009256 1.8e-40 171.8 152 60.5
VMungo1383G1541 Vigna mungo HOM05D007405 ORTHO05D009256 3.1e-40 171.0 540 78.1
Lalb_Chr23g0278451 Lupinus albus HOM05D007405 ORTHO05D009256 9.1e-40 169.5 157 56.7
SGA_v2.0_scaffold115G32153 Striga asiatica HOM05D007405 ORTHO05D009256 1.5e-39 168.7 145 62.1
Lj7A402T45 Lonicera japonica HOM05D007405 ORTHO05D009256 2.6e-39 167.9 166 57.8
Glyma.18G000700 Glycine max HOM05D007405 ORTHO05D009256 3.4e-39 167.5 520 80.0
COL.COLO4_25223 Corchorus olitorius HOM05D000330 ORTHO05D000209 4.5e-39 167.2 105 76.2
TAR039G0001 Trochodendron aralioides HOM05D002295 ORTHO05D002789 8.5e-38 162.9 161 57.8
Psat5g105040 Pisum sativum HOM05D007405 ORTHO05D009256 2.5e-37 161.4 166 51.2
Glyma.11G256300 Glycine max HOM05D007405 ORTHO05D009256 4.2e-37 160.6 516 79.7
Nn1g09226 Nelumbo nucifera HOM05D007405 ORTHO05D009256 2.1e-36 158.3 157 58.0
PSO832G3067 Papaver somniferum HOM05D007405 ORTHO05D009256 2.1e-36 158.3 215 46.5
Sc11g0006880 Simmondsia chinensis HOM05D007405 ORTHO05D009256 2.1e-36 158.3 524 83.4
PGSC0003DMG400001306 Solanum tuberosum HOM05D007405 ORTHO05D009256 4.7e-36 157.1 100 77.0
TPR.G22753 Trifolium pratense HOM05D007405 ORTHO05D009256 1.0e-35 156.0 166 52.4
Medtr3g083680 Medicago truncatula HOM05D007405 ORTHO05D009256 1.1e-34 152.5 110 65.5
Actinidia36037 Actinidia chinensis HOM05D007405 ORTHO05D009256 1.5e-34 152.1 191 49.2
Ca_16386_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 5.7e-34 150.2 153 52.3
Ca_29700_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 5.7e-34 150.2 153 52.3
PSO591G0419 Papaver somniferum HOM05D007405 ORTHO05D009256 1.1e-32 146.0 158 51.9
Rhsim10G0030900 Rhododendron simsii HOM05D007405 ORTHO05D009256 1.8e-32 145.2 95 74.7
Phvul.001G268500 Phaseolus vulgaris HOM05D007405 ORTHO05D009256 2.6e-26 124.8 71 81.7
MBI08_g09795_MAGBIO Magnolia biondii HOM05D007405 ORTHO05D009256 2.8e-25 121.3 75 74.7
ATR1127G129 Amborella trichopoda HOM05D007405 ORTHO05D009256 1.8e-24 118.6 154 48.1
Peaxi162Scf00129g00512 Petunia axillaris HOM05D007405 ORTHO05D009256 2.4e-24 118.2 70 78.6
CDE06G2170 Ceratophyllum demersum HOM05D007405 ORTHO05D009256 5.9e-23 113.6 75 72.0
Nitab4.5_0000564g0400 Nicotiana tabacum HOM05D007405 ORTHO05D009256 1.1e-21 109.4 65 76.9
SEGI_22031 Sequoiadendron giganteum HOM05D007405 ORTHO05D009256 9.4e-21 106.3 98 50.0
Pp3c3_5760 Physcomitrium patens HOM05D007405 ORTHO05D009256 8.0e-20 103.2 102 44.1
Pp3c3_5764 Physcomitrium patens HOM05D007405 ORTHO05D009256 8.0e-20 103.2 102 44.1
AagrBONN_evm.TU.Sc2ySwM_117.2241 Anthoceros agrestis HOM05D007405 ORTHO05D009256 7.5e-18 96.7 100 47.0
Mapoly0061s0076 Marchantia polymorpha HOM05D007405 ORTHO05D009256 2.2e-17 95.1 100 46.0
HPP92_019727 Vanilla planifolia HOM05D007405 ORTHO05D009256 2.2e-17 95.1 180 37.8
Eucgr.J02141 Eucalyptus grandis HOM05D007405 ORTHO05D009256 1.3e-14 85.9 53 75.5
Zm00001eb148940 Zea mays HOM05D007405 ORTHO05D009256 1.3e-14 85.9 69 58.0
Os01g0833000 Oryza sativa ssp. japonica HOM05D007405 ORTHO05D009256 5.5e-13 80.5 71 50.7
SMO367G0452 Selaginella moellendorffii HOM05D007405 ORTHO05D009256 3.6e-12 77.8 59 59.3
FAN02G2814 Fragaria x ananassa HOM05D007405 ORTHO05D009256 3.4e-10 71.2 39 87.2
Actinidia06062 Actinidia chinensis HOM05D007405 ORTHO05D009256 2.8e-09 68.2 73 56.2
Actinidia06059 Actinidia chinensis HOM05D007405 ORTHO05D009256 2.7e-07 61.6 47 70.2


User provided reference genes

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