Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 1.3e-174 616.3 310 100.0
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 1.0e-171 606.7 310 98.1
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 3.8e-171 604.7 310 97.4
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 2.0e-167 592.4 310 95.8
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 1.8e-165 585.9 308 94.8
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 3.2e-165 585.1 310 94.5
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 5.4e-165 584.3 310 94.2
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 5.4e-165 584.3 308 94.5
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 5.4e-165 584.3 310 94.2
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 5.4e-165 584.3 310 94.2
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 7.8e-164 580.5 311 94.2
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 1.3e-163 579.7 309 94.2
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 4.7e-161 571.2 310 91.6
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 1.1e-157 560.1 305 91.8
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 1.1e-149 533.5 307 85.7
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 5.4e-149 531.2 310 85.8
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 1.2e-148 530.0 307 86.3
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 8.6e-147 523.9 307 83.7
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 1.1e-146 523.5 307 84.0
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 1.9e-146 522.7 307 84.0
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 2.5e-146 522.3 307 84.0
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 5.6e-146 521.2 307 83.4
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 7.3e-146 520.8 310 84.2
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 7.3e-146 520.8 310 83.9
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 9.5e-146 520.4 307 83.1
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 1.2e-145 520.0 310 83.9
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 1.6e-145 519.6 308 83.1
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 2.1e-145 519.2 305 83.9
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 3.6e-145 518.5 307 84.0
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 6.2e-145 517.7 307 83.7
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 6.2e-145 517.7 307 83.7
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 2.3e-144 515.8 310 82.6
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 2.3e-144 515.8 310 82.6
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 4.0e-144 515.0 310 82.9
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 5.2e-144 514.6 310 82.9
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 6.8e-144 514.2 307 83.4
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 1.2e-143 513.5 307 83.4
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 1.5e-143 513.1 307 82.7
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 1.5e-143 513.1 310 81.3
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 1.5e-143 513.1 310 81.6
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 2.0e-143 512.7 307 82.4
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 3.4e-143 511.9 307 83.1
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 5.8e-143 511.1 310 81.6
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 5.8e-143 511.1 310 81.6
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 7.6e-143 510.8 310 81.6
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 7.6e-143 510.8 320 80.6
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 1.3e-142 510.0 307 81.8
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 1.3e-142 510.0 307 83.4
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 1.3e-142 510.0 319 79.9
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 1.7e-142 509.6 307 82.1
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 4.9e-142 508.1 307 80.8
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 4.9e-142 508.1 318 80.2
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 4.9e-142 508.1 306 81.0
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 8.4e-142 507.3 304 84.5
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 3.2e-141 505.4 332 77.1
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 1.6e-140 503.1 305 81.6
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 3.5e-140 501.9 338 77.8
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 3.5e-140 501.9 310 80.0
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 4.6e-140 501.5 312 80.8
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 1.3e-139 500.0 310 79.7
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 3.0e-139 498.8 309 80.9
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 4.3e-138 495.0 308 79.2
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 1.1e-136 490.3 310 78.4
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 5.2e-136 488.0 299 81.6
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.9e-134 482.3 371 68.7
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 1.1e-133 480.3 296 79.7
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 1.1e-133 480.3 307 78.8
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 9.3e-133 477.2 307 78.2
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 4.6e-132 474.9 307 77.9
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 6.2e-129 464.5 310 77.4
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 1.1e-128 463.8 310 76.1
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 5.8e-127 458.0 329 72.3
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 2.4e-125 452.6 304 74.3
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 4.2e-125 451.8 299 75.9
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 7.1e-125 451.1 323 73.4
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 3.5e-124 448.7 342 68.7
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 1.0e-123 447.2 263 85.2
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 6.7e-123 444.5 351 65.0
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 5.6e-122 441.4 497 53.1
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 1.6e-121 439.9 322 70.5
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 1.8e-120 436.4 259 82.6
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.4e-120 436.0 321 71.3
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 3.1e-120 435.6 314 72.3
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 2.0e-119 433.0 308 71.8
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 5.5e-117 424.9 287 75.3
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 5.5e-117 424.9 419 57.0
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 4.6e-116 421.8 309 72.8
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 8.7e-115 417.5 300 70.0
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 1.1e-114 417.2 305 68.9
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 3.1e-112 409.1 260 80.0
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 4.2e-109 398.7 310 68.1
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 5.5e-109 398.3 293 67.6
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 5.5e-109 398.3 227 85.9
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 7.1e-109 397.9 297 66.3
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 7.9e-108 394.4 259 76.4
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 1.3e-107 393.7 243 81.5
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 8.7e-107 391.0 252 77.8
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.9e-106 389.8 296 70.3
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 3.8e-102 375.6 294 64.6
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 1.3e-97 360.5 261 68.2
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 6.3e-97 358.2 255 71.8
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 1.7e-94 350.1 219 79.5
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 6.5e-94 348.2 244 73.0
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.8e-88 330.1 305 59.0
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 4.1e-88 328.9 209 77.0
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 1.0e-86 324.3 226 69.0
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 1.4e-85 320.5 299 55.2
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 7.2e-85 318.2 310 58.1
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 2.8e-73 279.6 184 76.6
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 6.5e-70 268.5 302 50.3
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 8.5e-70 268.1 177 76.3
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 3.1e-64 249.6 193 67.9
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 1.5e-61 240.7 158 77.8
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 2.5e-61 240.0 157 73.9
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 2.8e-60 236.5 157 74.5
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.0e-58 230.3 490 34.7
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 1.2e-55 221.1 120 87.5
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 2.9e-54 216.5 118 86.4
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 3.3e-53 213.0 143 76.9
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 4.6e-47 192.6 228 51.8
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 1.2e-44 184.5 113 77.9
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 4.1e-40 169.5 270 35.9
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.4e-35 154.5 99 75.8
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 7.5e-34 148.7 291 33.3
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 5.2e-27 125.9 66 89.4
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 1.4e-24 117.9 326 26.1
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.9e-24 117.5 61 91.8
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.6e-23 114.4 59 91.5
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 6.0e-23 112.5 59 89.8
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 8.7e-22 108.6 63 81.0
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 4.3e-21 106.3 55 90.9
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 2.8e-20 103.6 70 68.6
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 7.6e-18 95.5 60 80.0
SEGI_04261 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 4.3e-13 79.7 60 65.0
arahy.Tifrunner.gnm1.ann1.XYVL4V Arachis hypogaea HOM05D005540 ORTHO05D023714 3.1e-11 73.6 43 79.1
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 2.0e-10 70.9 33 93.9
SHI09501 Sapria himalayana HOM05D005540 ORTHO05D006932 2.1e-07 60.8 55 54.5


User provided reference genes

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