Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 1.3e-73 279.6 140 100.0
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 5.0e-70 267.7 140 95.0
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 3.0e-62 241.9 140 82.9
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 2.1e-60 235.7 141 83.7
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 4.0e-59 231.5 140 80.0
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 4.0e-59 231.5 140 80.0
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 4.0e-59 231.5 140 80.0
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 4.0e-59 231.5 140 80.0
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 4.0e-59 231.5 140 80.0
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 4.4e-58 228.0 141 80.9
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 1.7e-57 226.1 140 79.3
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 3.7e-57 224.9 140 79.3
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 2.4e-56 222.2 141 80.1
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 2.4e-56 222.2 141 80.1
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 3.5e-55 218.4 141 79.4
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 4.7e-52 208.0 140 62.1
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 1.1e-51 206.8 140 70.7
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 1.8e-51 206.1 132 70.5
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 4.4e-50 201.4 140 62.9
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 5.8e-50 201.1 140 72.9
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 2.2e-49 199.1 140 65.0
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 4.9e-49 198.0 144 61.1
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 8.4e-49 197.2 144 66.7
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 1.1e-48 196.8 107 72.9
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 1.1e-48 196.8 144 59.0
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 1.4e-48 196.4 143 66.4
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 2.4e-48 195.7 140 67.1
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 3.2e-48 195.3 140 62.9
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 4.1e-48 194.9 137 61.3
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 7.1e-48 194.1 140 62.9
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 9.2e-48 193.7 142 61.3
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 9.2e-48 193.7 142 61.3
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 1.2e-47 193.4 140 67.1
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 1.6e-47 193.0 140 59.3
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 2.1e-47 192.6 140 66.4
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 2.7e-47 192.2 142 61.3
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 3.5e-47 191.8 145 59.3
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 7.8e-47 190.7 142 65.5
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 7.8e-47 190.7 140 60.0
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 7.8e-47 190.7 142 64.8
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.3e-46 189.9 142 58.5
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 1.3e-46 189.9 140 62.1
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.7e-46 189.5 140 62.9
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.3e-46 189.1 142 57.7
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 2.3e-46 189.1 143 61.5
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 3.0e-46 188.7 146 58.2
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 3.0e-46 188.7 140 59.3
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 3.0e-46 188.7 140 63.6
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 3.0e-46 188.7 140 58.6
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 3.0e-46 188.7 142 59.9
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 6.6e-46 187.6 143 62.9
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 8.6e-46 187.2 142 57.7
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 8.6e-46 187.2 116 66.4
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 1.1e-45 186.8 146 57.5
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.5e-45 186.4 140 57.1
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.5e-45 186.4 140 57.1
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 1.5e-45 186.4 140 57.1
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 1.9e-45 186.0 140 64.3
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 1.9e-45 186.0 137 59.9
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 2.5e-45 185.7 145 63.4
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 2.5e-45 185.7 119 63.9
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 3.3e-45 185.3 146 58.9
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 4.3e-45 184.9 104 69.2
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 4.3e-45 184.9 140 57.1
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 4.3e-45 184.9 147 61.2
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 5.6e-45 184.5 159 59.1
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 7.3e-45 184.1 146 57.5
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.2e-44 183.3 136 58.8
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 3.6e-44 181.8 148 56.1
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 3.6e-44 181.8 142 62.7
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 2.4e-43 179.1 143 54.5
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 2.4e-43 179.1 142 61.3
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 4.0e-43 178.3 145 51.7
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 4.0e-43 178.3 140 55.7
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 6.9e-43 177.6 140 59.3
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 3.4e-42 175.3 106 65.1
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 3.4e-42 175.3 115 65.2
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 7.6e-42 174.1 143 55.9
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 9.9e-42 173.7 152 52.6
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 3.8e-41 171.8 140 56.4
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 1.9e-40 169.5 173 46.8
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 3.2e-40 168.7 106 61.3
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 4.2e-40 168.3 106 61.3
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 5.4e-40 167.9 146 54.1
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 7.1e-40 167.5 107 58.9
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 1.6e-39 166.4 182 44.5
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 1.6e-39 166.4 142 51.4
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 2.7e-39 165.6 145 54.5
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 6.0e-39 164.5 103 66.0
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 1.7e-38 162.9 179 45.8
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 3.0e-38 162.2 91 69.2
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 9.6e-37 157.1 116 51.7
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 2.1e-36 156.0 138 52.2
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.8e-36 155.6 106 61.3
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 8.1e-36 154.1 99 59.6
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 2.4e-35 152.5 141 52.5
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 1.5e-34 149.8 140 50.7
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 2.6e-34 149.1 133 53.4
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 5.8e-34 147.9 123 62.6
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 9.9e-34 147.1 106 58.5
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 1.1e-32 143.7 78 71.8
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 5.4e-32 141.4 114 56.1
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 3.5e-31 138.7 115 53.9
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 5.1e-30 134.8 78 64.1
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 1.5e-29 133.3 157 46.5
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 1.8e-27 126.3 82 62.2
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 9.0e-27 124.0 90 58.9
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 3.2e-24 115.5 104 52.9
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.6e-23 113.2 97 58.8
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.6e-23 113.2 97 58.8
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 1.3e-22 110.2 96 57.3
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 3.9e-22 108.6 95 53.7
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 6.7e-22 107.8 97 54.6
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 6.7e-22 107.8 97 54.6
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.9e-21 106.3 85 57.6
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 9.6e-21 104.0 93 46.2
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 4.8e-20 101.7 96 53.1
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 8.4e-17 90.9 103 44.7
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 7.9e-15 84.3 56 58.9
C07p51340 Brassica napus HOM05D006296 ORTHO05D007777 7.6e-10 67.8 65 67.7
BolC7t45633H Brassica oleracea HOM05D006296 ORTHO05D007777 1.4e-08 63.5 64 68.8
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 1.6e-07 60.1 38 65.8
arahy.Tifrunner.gnm1.ann1.W44VBU Arachis hypogaea HOM05D043198 ORTHO05D007777 7.9e-07 57.8 64 48.4
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 1.8e-06 56.6 65 46.2
MBI18_g17001_MAGBIO Magnolia biondii HOM05D006296 ORTHO05D007777 1.8e-06 56.6 64 60.9
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 3.0e-06 55.8 64 50.0


User provided reference genes

Program Settings