Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G25500 Arabidopsis lyrata HOM05D008043 ORTHO05D010395 2.8e-80 302.0 165 100.0
BolC2t07184H Brassica oleracea HOM05D008043 ORTHO05D010395 1.8e-21 106.7 154 48.1
BNapus_Darmor_BZH_scaffold_38p00490 Brassica napus HOM05D008043 ORTHO05D010395 1.5e-20 103.6 154 48.1
BcaC03g13905 Brassica carinata HOM05D001688 ORTHO05D010395 3.3e-20 102.4 154 47.4
C02p11120 Brassica napus HOM05D008043 ORTHO05D010395 3.3e-20 102.4 154 47.4
Thhalv10015531m.g Eutrema salsugineum HOM05D008043 ORTHO05D010395 5.6e-20 101.7 105 50.5
BraA02t05677Z Brassica rapa HOM05D008043 ORTHO05D010395 2.4e-18 96.3 154 45.5
BcaB05g22710 Brassica carinata HOM05D008043 ORTHO05D010395 4.0e-18 95.5 120 50.8
BcaNung06005 Brassica carinata HOM05D008043 ORTHO05D010395 1.5e-17 93.6 71 59.2
BcaC05g27059 Brassica carinata HOM05D008043 ORTHO05D010395 2.9e-16 89.4 81 51.9
C05p29170 Brassica napus HOM05D008043 ORTHO05D010395 2.9e-16 89.4 81 51.9
A09p36190 Brassica napus HOM05D008043 ORTHO05D010395 3.8e-16 89.0 81 51.9
BraA09t39144Z Brassica rapa HOM05D008043 ORTHO05D010395 3.8e-16 89.0 81 51.9
AL8G34510 Arabidopsis lyrata HOM05D008043 ORTHO05D010395 1.4e-15 87.0 90 45.6
A03p51150 Brassica napus HOM05D008043 ORTHO05D010395 9.3e-15 84.3 63 58.7
BolC5t31648H Brassica oleracea HOM05D008043 ORTHO05D010395 6.0e-14 81.6 61 59.0
C04p09330 Brassica napus HOM05D008043 ORTHO05D010395 3.0e-13 79.3 60 58.3
C04p09280 Brassica napus HOM05D008043 ORTHO05D010395 5.1e-13 78.6 60 56.7
Carub.0006s2942 Capsella rubella HOM05D008043 ORTHO05D010395 6.7e-13 78.2 60 56.7
BcaC02g11981 Brassica carinata HOM05D008043 ORTHO05D010395 1.5e-12 77.0 60 56.7
BcaB02g09207 Brassica carinata HOM05D008043 ORTHO05D010395 1.9e-12 76.6 57 57.9
BolC4t22503H Brassica oleracea HOM05D008043 ORTHO05D010395 1.9e-12 76.6 60 56.7
BcaB02g09206 Brassica carinata HOM05D008043 ORTHO05D010395 3.3e-12 75.9 83 45.8
BcaC02g11979 Brassica carinata HOM05D008043 ORTHO05D010395 3.3e-12 75.9 59 57.6
AL132U10010 Arabidopsis lyrata HOM05D008043 ORTHO05D031374 5.6e-12 75.1 200 32.0
Thhalv10026891m.g Eutrema salsugineum HOM05D008043 ORTHO05D010395 7.4e-12 74.7 155 34.8
BcaC02g11993 Brassica carinata HOM05D008043 ORTHO05D010395 2.1e-11 73.2 59 55.9
BolC4t22514H Brassica oleracea HOM05D008043 ORTHO05D010395 2.1e-11 73.2 59 55.9
Thhalv10015284m.g Eutrema salsugineum HOM05D008043 ORTHO05D010395 2.8e-11 72.8 79 44.3
BraA05t19738Z Brassica rapa HOM05D008043 ORTHO05D010395 4.8e-11 72.0 59 55.9
BcaC01g00257 Brassica carinata HOM05D008043 ORTHO05D010395 8.1e-11 71.2 137 32.1
C03p77350 Brassica napus HOM05D008043 ORTHO05D010395 8.1e-11 71.2 137 32.1
Carub.0008s1892 Capsella rubella HOM05D008043 ORTHO05D010395 8.1e-11 71.2 72 50.0
BcaNung05674 Brassica carinata HOM05D008043 ORTHO05D010395 1.1e-10 70.9 52 59.6
A05p07710 Brassica napus HOM05D008043 ORTHO05D010395 1.1e-10 70.9 59 54.2
BolC3t19988H Brassica oleracea HOM05D008043 ORTHO05D010395 1.1e-10 70.9 137 32.1
BcaC02g11982 Brassica carinata HOM05D008043 ORTHO05D010395 1.4e-10 70.5 59 54.2
C04p09090 Brassica napus HOM05D008043 ORTHO05D010395 1.4e-10 70.5 59 54.2
C04p09250 Brassica napus HOM05D008043 ORTHO05D010395 1.4e-10 70.5 59 54.2
C04p09260 Brassica napus HOM05D008043 ORTHO05D010395 1.4e-10 70.5 59 54.2
BolC4t22502H Brassica oleracea HOM05D008043 ORTHO05D010395 1.4e-10 70.5 59 54.2
BolC4t22531H Brassica oleracea HOM05D008043 ORTHO05D010395 1.4e-10 70.5 59 54.2
BolC4t22534H Brassica oleracea HOM05D008043 ORTHO05D010395 1.4e-10 70.5 59 54.2
A08p23990 Brassica napus HOM05D008043 ORTHO05D010395 1.8e-10 70.1 137 31.4
BraA08t34356Z Brassica rapa HOM05D008043 ORTHO05D010395 1.8e-10 70.1 156 33.3
Thhalv10027509m.g Eutrema salsugineum HOM05D008043 ORTHO05D010395 2.4e-10 69.7 66 54.5
BcaB02g09171 Brassica carinata HOM05D008043 ORTHO05D010395 5.3e-10 68.6 82 41.5
Aa31LG8G14480 Aethionema arabicum HOM05D008043 ORTHO05D010395 1.5e-09 67.0 73 46.6
AL8G33140 Arabidopsis lyrata HOM05D008043 ORTHO05D010395 3.4e-09 65.9 78 43.6
Carub.0006s3662 Capsella rubella HOM05D008043 ORTHO05D031374 3.4e-09 65.9 180 33.3
BcaB03g12228 Brassica carinata HOM05D008043 ORTHO05D010395 7.6e-09 64.7 72 43.1
Carub.0005s0862 Capsella rubella HOM05D008043 ORTHO05D031374 1.3e-08 63.9 165 31.5
AL8G34460 Arabidopsis lyrata HOM05D008043 ORTHO05D010395 2.2e-08 63.2 78 39.7
Sp7g36960 Schrenkiella parvula HOM05D008043 ORTHO05D010395 2.9e-08 62.8 83 39.8
AL3G31920 Arabidopsis lyrata HOM05D002658 ORTHO05D003000 3.8e-08 62.4 54 51.9
Aa31LG8G14450 Aethionema arabicum HOM05D008043 ORTHO05D010395 4.9e-08 62.0 170 32.4
Thhalv10014402m.g Eutrema salsugineum HOM05D008043 ORTHO05D010395 4.9e-08 62.0 83 42.2
Aa31LG8G14460 Aethionema arabicum HOM05D008043 ORTHO05D010395 8.4e-08 61.2 61 49.2
AT3G18610 Arabidopsis thaliana HOM05D002658 ORTHO05D003000 3.2e-07 59.3 54 48.1
AT1G73490 Arabidopsis thaliana HOM05D008043 ORTHO05D010395 1.2e-06 57.4 60 43.3
Carub.0002s2014 Capsella rubella HOM05D008043 ORTHO05D010395 1.2e-06 57.4 105 36.2
Carub.0001s3809 Capsella rubella HOM05D002658 ORTHO05D003000 3.5e-06 55.8 51 45.1
Carub.0002s2022 Capsella rubella HOM05D008043 ORTHO05D010395 3.5e-06 55.8 105 36.2
Thhalv10020940m.g Eutrema salsugineum HOM05D002658 ORTHO05D003000 3.5e-06 55.8 56 41.1
CARHR093990 Cardamine hirsuta HOM05D002658 ORTHO05D003000 6.0e-06 55.1 52 48.1
Carub.0008s1890 Capsella rubella HOM05D008043 ORTHO05D010395 7.9e-06 54.7 42 57.1


User provided reference genes

Program Settings