Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 0.0e+00 1595.9 1044 100.0
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 0.0e+00 1457.2 1052 93.7
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 0.0e+00 1421.8 1075 90.8
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 0.0e+00 1298.5 1062 86.2
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 0.0e+00 1294.3 1062 86.1
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 0.0e+00 1291.9 1058 86.0
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 0.0e+00 1264.6 1056 84.8
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 0.0e+00 1251.5 1082 82.8
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 0.0e+00 1243.8 1055 84.9
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 0.0e+00 1230.7 1068 80.5
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 0.0e+00 1226.1 1021 86.1
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 0.0e+00 1096.6 1083 74.1
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 6.8e-297 1024.2 916 86.2
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 9.3e-270 934.1 1106 67.6
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 2.7e-269 932.6 1065 68.8
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 1.8e-268 929.9 1111 66.8
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 2.3e-268 929.5 1069 67.1
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 5.7e-267 924.9 1111 66.7
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.3e-266 923.7 1063 67.1
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 4.8e-266 921.8 1049 68.4
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 2.4e-265 919.5 1112 66.3
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 2.0e-264 916.4 1065 67.1
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 3.4e-264 915.6 1045 68.9
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 1.7e-263 913.3 1061 67.9
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 1.7e-263 913.3 1061 67.9
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 8.5e-263 911.0 1112 65.9
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 8.5e-263 911.0 1064 67.6
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 1.9e-262 909.8 1065 67.6
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 3.2e-262 909.1 1062 67.3
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 4.6e-261 905.2 1099 65.8
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 7.9e-261 904.4 1064 67.5
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 1.3e-260 903.7 1053 66.5
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 3.0e-260 902.5 1106 66.5
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 3.0e-260 902.5 1066 67.2
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 5.1e-260 901.7 1058 68.1
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 1.5e-259 900.2 1118 64.5
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 1.9e-259 899.8 1069 66.3
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 2.5e-259 899.4 1091 65.9
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 2.5e-259 899.4 1048 67.7
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 7.4e-259 897.9 1060 67.6
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 9.7e-259 897.5 1061 68.1
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 1.3e-258 897.1 1051 66.8
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 1.6e-258 896.7 1083 66.2
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 3.7e-258 895.6 1067 67.3
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 3.1e-257 892.5 1054 65.6
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 4.1e-257 892.1 1110 66.8
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 6.9e-257 891.3 1060 66.2
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.2e-256 890.6 1055 66.4
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 1.5e-256 890.2 1129 64.9
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 1.9e-254 883.2 1060 66.4
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 1.4e-252 877.1 1055 66.1
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 3.0e-252 875.9 1056 55.1
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 3.0e-252 875.9 1112 65.5
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.1e-251 874.0 1110 65.0
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.3e-251 872.5 1100 65.2
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.7e-250 870.2 1109 64.6
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 5.9e-248 861.7 1056 66.5
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 1.4e-246 857.1 1067 65.8
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 3.2e-246 855.9 1045 65.8
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 4.2e-246 855.5 1049 66.3
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 2.7e-245 852.8 1050 65.8
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 6.1e-245 851.7 1064 65.1
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 1.4e-244 850.5 1089 64.5
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 3.9e-244 849.0 1067 65.4
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 3.9e-244 849.0 1089 64.3
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 5.2e-244 848.6 1060 65.1
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 2.6e-243 846.3 1060 64.9
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 3.3e-243 845.9 1061 65.1
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 4.4e-243 845.5 1058 64.4
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 9.7e-243 844.3 1047 65.7
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 1.1e-238 830.9 1080 63.1
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 2.5e-238 829.7 1056 64.6
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 3.2e-238 829.3 1046 66.3
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 5.5e-238 828.6 1110 63.9
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 8.0e-237 824.7 1078 63.7
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.8e-236 823.5 1078 63.9
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.3e-234 817.4 1063 63.5
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 4.8e-234 815.5 1055 63.7
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 1.0e-231 807.7 1070 57.3
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 1.3e-231 807.4 534 71.5
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 5.0e-231 805.4 1218 42.7
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 5.5e-230 802.0 1045 64.2
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 7.2e-230 801.6 1064 62.9
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 7.2e-230 801.6 1051 62.8
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 7.2e-230 801.6 1145 44.3
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 1.6e-229 800.4 1055 63.0
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 3.4e-227 792.7 1047 62.3
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 9.8e-227 791.2 1048 64.8
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 1.2e-224 784.3 1073 61.1
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 4.4e-219 765.8 486 75.3
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 2.8e-218 763.1 535 68.0
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 1.2e-216 757.7 910 68.5
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 2.3e-215 753.4 1060 62.3
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 6.6e-215 751.9 536 67.9
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 6.8e-212 741.9 987 59.8
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 2.3e-204 716.8 490 70.0
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.1e-204 716.5 819 61.7
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 4.9e-202 709.1 1062 56.0
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 1.8e-196 690.6 1058 51.0
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 7.5e-195 685.3 923 66.5
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 5.8e-187 659.1 1041 58.2
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 5.4e-185 652.5 698 80.4
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.5e-174 617.8 484 62.4
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 1.3e-159 568.2 978 52.8
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 3.3e-158 563.5 896 46.9
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 4.3e-142 510.0 842 63.4
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 8.5e-138 495.7 1035 48.3
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 7.2e-137 492.7 1029 42.7
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 2.1e-128 464.5 440 56.1
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 1.7e-125 454.9 787 63.7
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 5.3e-124 449.9 895 40.7
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 3.3e-105 387.5 254 68.9
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 2.5e-97 361.3 538 39.0
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 2.6e-86 324.7 177 88.1
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 9.8e-86 322.8 203 71.4
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 4.0e-79 300.8 292 53.4
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 1.4e-71 275.8 449 37.2
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 1.3e-69 269.2 349 48.7
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 2.6e-62 245.0 133 86.5
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 1.9e-60 238.8 353 46.7
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 3.1e-55 221.5 271 48.7
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 4.0e-55 221.1 339 43.1
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 1.3e-48 199.5 130 78.5
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 2.8e-48 198.4 130 77.7
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 3.7e-48 198.0 307 44.3
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 3.0e-42 178.3 888 35.0
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 8.7e-42 176.8 99 81.8
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 1.5e-38 166.0 93 87.1
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 4.5e-38 164.5 199 50.8
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.8e-34 152.5 93 75.3
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.6e-32 146.0 109 70.6
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 2.8e-32 145.2 93 69.9
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 1.7e-29 136.0 123 61.0
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 5.0e-29 134.4 187 42.8
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.1e-23 116.7 75 65.3
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 1.4e-23 116.3 75 77.3
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.7e-21 109.4 168 38.7
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 3.6e-19 101.7 133 42.1
BcaC09g51691 Brassica carinata HOM05D003801 ORTHO05D017532 9.1e-15 87.0 135 51.1
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.6e-11 76.3 120 38.3
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 4.8e-08 64.7 49 55.1
CSS0042095 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 6.3e-08 64.3 38 76.3
CSS0012173 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.4e-07 63.2 59 54.2
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 9.1e-07 60.5 142 29.6
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.6e-06 58.9 43 62.8


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