Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G50470 Arabidopsis lyrata HOM05D000319 ORTHO05D005616 9.3e-147 523.5 256 100.0
Carub.0006s3456 Capsella rubella HOM05D000319 ORTHO05D005616 1.8e-145 519.2 256 98.8
AT4G02580 Arabidopsis thaliana HOM05D000319 ORTHO05D005616 6.7e-145 517.3 256 98.8
Thhalv10028900m.g Eutrema salsugineum HOM05D000319 ORTHO05D005616 5.6e-144 514.2 256 98.0
CARHR250870 Cardamine hirsuta HOM05D000319 ORTHO05D005616 1.6e-143 512.7 256 97.3
BcaB01g02030 Brassica carinata HOM05D000319 ORTHO05D005616 2.1e-143 512.3 253 98.4
BcaB01g02475 Brassica carinata HOM05D000319 ORTHO05D005616 2.8e-143 511.9 256 97.3
Sp6g02490 Schrenkiella parvula HOM05D000319 ORTHO05D005616 6.2e-143 510.8 256 96.9
BcaC04g23998 Brassica carinata HOM05D000319 ORTHO05D000903 4.0e-142 508.1 253 97.6
C09p02100 Brassica napus HOM05D000319 ORTHO05D000903 4.0e-142 508.1 253 97.6
BolC9t53140H Brassica oleracea HOM05D000319 ORTHO05D005616 6.9e-142 507.3 256 96.9
A09p02000 Brassica napus HOM05D000319 ORTHO05D000903 1.2e-141 506.5 253 97.6
A03p30990 Brassica napus HOM05D000319 ORTHO05D000903 1.0e-140 503.4 253 96.8
BraA09t35850Z Brassica rapa HOM05D000319 ORTHO05D000903 8.4e-140 500.4 253 96.8
Aa31LG5G2210 Aethionema arabicum HOM05D000319 ORTHO05D005616 1.9e-139 499.2 256 94.9
BraA03t12276Z Brassica rapa HOM05D000319 ORTHO05D000903 3.2e-139 498.4 253 96.0
BolC3t16066H Brassica oleracea HOM05D000319 ORTHO05D005616 7.9e-138 493.8 256 95.3
BcaC01g06747 Brassica carinata HOM05D000319 ORTHO05D000903 2.5e-136 488.8 253 95.3
C03p37760 Brassica napus HOM05D000319 ORTHO05D005616 2.5e-136 488.8 253 95.3
THA.LOC104825981 Tarenaya hassleriana HOM05D000319 ORTHO05D005616 2.6e-133 478.8 256 91.0
THA.LOC104801256 Tarenaya hassleriana HOM05D000319 ORTHO05D005616 2.2e-132 475.7 257 90.7
CANSAT56G1819 Cannabis sativa HOM05D000319 ORTHO05D005616 4.2e-131 471.5 256 90.2
Lalb_Chr22g0350801 Lupinus albus HOM05D000319 ORTHO05D005616 3.6e-130 468.4 256 89.1
Prupe.3G092100 Prunus persica HOM05D000319 ORTHO05D005616 6.1e-130 467.6 256 89.1
TWI18G1113 Tripterygium wilfordii HOM05D000319 ORTHO05D005616 1.4e-129 466.5 256 88.3
HanXRQChr15g0467021 Helianthus annuus HOM05D000319 ORTHO05D005616 5.1e-129 464.5 256 88.3
arahy.Tifrunner.gnm1.ann1.69SMRU Arachis hypogaea HOM05D000319 ORTHO05D005616 6.7e-129 464.2 256 88.7
Ca_01047_v3 Cicer arietinum L. HOM05D000319 ORTHO05D005616 6.7e-129 464.2 256 87.9
MD17G1215900 Malus domestica HOM05D000319 ORTHO05D005616 6.7e-129 464.2 256 88.3
ECA247G3951 Erigeron canadensis HOM05D000319 ORTHO05D005616 8.8e-129 463.8 256 87.5
CSS0020063 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D005616 1.1e-128 463.4 256 87.9
Eucgr.K03315 Eucalyptus grandis HOM05D000319 ORTHO05D005616 1.1e-128 463.4 256 89.8
Cpa.g.sc52.96 Carica papaya HOM05D000319 ORTHO05D005616 2.5e-128 462.2 256 88.3
PGR044G1796 Punica granatum HOM05D000319 ORTHO05D005616 3.3e-128 461.8 256 87.1
GSVIVG01000718001 Vitis vinifera HOM05D000319 ORTHO05D005616 3.3e-128 461.8 256 86.7
Atru.chr5.1559 Acer truncatum HOM05D000319 ORTHO05D005616 9.7e-128 460.3 256 88.7
MD17G1216000 Malus domestica HOM05D000319 ORTHO05D005616 9.7e-128 460.3 256 87.5
Glyma.15G006400 Glycine max HOM05D000319 ORTHO05D005616 1.3e-127 459.9 256 87.5
Gohir.D08G055800 Gossypium hirsutum HOM05D000319 ORTHO05D005616 1.3e-127 459.9 256 87.5
Glyma.13G367000 Glycine max HOM05D000319 ORTHO05D005616 1.7e-127 459.5 256 87.1
RcHm_v2.0_Chr2g0134501 Rosa chinensis HOM05D000319 ORTHO05D005616 1.7e-127 459.5 256 87.9
Gorai.004G056700 Gossypium raimondii HOM05D000319 ORTHO05D005616 2.2e-127 459.1 256 87.1
Rhsim13G0030900 Rhododendron simsii HOM05D000319 ORTHO05D005616 2.2e-127 459.1 256 87.5
Gohir.A08G045400 Gossypium hirsutum HOM05D000319 ORTHO05D005616 2.8e-127 458.8 256 87.1
Lsat_1_v5_gn_9_8201 Lactuca sativa HOM05D000319 ORTHO05D005616 2.8e-127 458.8 256 85.9
Thecc.01G267900 Theobroma cacao HOM05D000319 ORTHO05D005616 2.8e-127 458.8 256 87.5
Cfa008743 Carpinus fangiana HOM05D000319 ORTHO05D005616 4.8e-127 458.0 256 87.5
Haze_11759 Corylus avellana HOM05D000319 ORTHO05D005616 6.3e-127 457.6 256 87.5
Duzib211G0655 Durio zibethinus HOM05D000319 ORTHO05D005616 6.3e-127 457.6 256 87.1
CiPaw.06G060900 Carya illinoinensis HOM05D000319 ORTHO05D005616 8.2e-127 457.2 256 86.7
COL.COLO4_06081 Corchorus olitorius HOM05D000319 ORTHO05D005616 8.2e-127 457.2 256 87.1
Potri.005G218000 Populus trichocarpa HOM05D000319 ORTHO05D005616 8.2e-127 457.2 256 87.1
Ciclev10021811m.g Citrus clementina HOM05D000319 ORTHO05D005616 1.4e-126 456.4 256 86.7
Duzib138G1611 Durio zibethinus HOM05D000319 ORTHO05D005616 1.4e-126 456.4 256 87.1
TPR.G37240 Trifolium pratense HOM05D000319 ORTHO05D005616 1.4e-126 456.4 256 86.3
FvH4_6g29310 Fragaria vesca HOM05D000319 ORTHO05D005616 1.8e-126 456.1 256 87.9
Hma1.2p1_0760F.1_g214240 Hydrangea macrophylla HOM05D000319 ORTHO05D005616 2.4e-126 455.7 256 85.2
Potri.002G045200 Populus trichocarpa HOM05D000319 ORTHO05D005616 2.4e-126 455.7 256 86.3
Dinv34565 Davidia involucrata HOM05D000319 ORTHO05D005616 3.1e-126 455.3 256 85.9
TWI75G0800 Tripterygium wilfordii HOM05D000319 ORTHO05D005616 3.1e-126 455.3 256 86.3
Medtr2g104110 Medicago truncatula HOM05D000319 ORTHO05D005616 4.1e-126 454.9 256 86.3
Phvul.005G179400 Phaseolus vulgaris HOM05D000319 ORTHO05D005616 4.1e-126 454.9 256 85.5
ClCG07G012250 Citrullus lanatus HOM05D000319 ORTHO05D005616 5.3e-126 454.5 256 86.3
Lj3g0018932 Lotus japonicus HOM05D000319 ORTHO05D005616 5.3e-126 454.5 256 85.5
Ah.11g049990 Amaranthus hybridus HOM05D000319 ORTHO05D005616 9.1e-126 453.8 256 86.3
MSTRG.18283 Avicennia marina HOM05D000319 ORTHO05D005616 1.5e-125 453.0 256 85.9
Nn1g02549 Nelumbo nucifera HOM05D000319 ORTHO05D005616 2.0e-125 452.6 254 86.6
SalBow4G3161 Salvia bowleyana HOM05D000319 ORTHO05D005616 4.5e-125 451.4 256 86.3
MELO3C017843.2 Cucumis melo HOM05D000319 ORTHO05D005616 7.7e-125 450.7 256 85.5
Manes.01G201800 Manihot esculenta HOM05D000319 ORTHO05D005616 7.7e-125 450.7 256 85.9
Manes.14G005900 Manihot esculenta HOM05D000319 ORTHO05D005616 7.7e-125 450.7 256 85.9
Sed0023498 Sechium edule HOM05D000319 ORTHO05D005616 7.7e-125 450.7 256 85.2
Actinidia19981 Actinidia chinensis HOM05D000319 ORTHO05D005616 1.3e-124 449.9 256 85.5
SGA_v2.0_scaffold1G00552 Striga asiatica HOM05D000319 ORTHO05D005616 6.5e-124 447.6 256 84.8
FAN14G4091 Fragaria x ananassa HOM05D000319 ORTHO05D005616 1.1e-123 446.8 263 85.2
Lj2A1160T39 Lonicera japonica HOM05D000319 ORTHO05D005616 1.1e-123 446.8 256 85.9
CsaV3_4G001900 Cucumis sativus L. HOM05D000319 ORTHO05D005616 1.4e-123 446.4 256 84.8
Actinidia09093 Actinidia chinensis HOM05D000319 ORTHO05D005616 1.9e-123 446.0 256 85.2
CiPaw.05G169400 Carya illinoinensis HOM05D000319 ORTHO05D005616 1.9e-123 446.0 256 85.2
DCAR_018446 Daucus carota HOM05D000319 ORTHO05D005616 2.5e-123 445.7 256 85.2
Migut.D00371 Erythranthe guttata HOM05D000319 ORTHO05D005616 2.5e-123 445.7 256 84.8
PSO210G0711 Papaver somniferum HOM05D000319 ORTHO05D005616 5.5e-123 444.5 256 84.0
PSO832G0193 Papaver somniferum HOM05D000319 ORTHO05D005616 5.5e-123 444.5 256 84.0
TAR365G0186 Trochodendron aralioides HOM05D000319 ORTHO05D005616 5.5e-123 444.5 254 86.2
AUR62032260 Chenopodium quinoa HOM05D000319 ORTHO05D005616 7.2e-123 444.1 256 83.6
Aqoxy5G00356 Aquilegia oxysepala HOM05D000319 ORTHO05D005616 9.4e-123 443.7 254 86.2
Sc17g0001020 Simmondsia chinensis HOM05D000319 ORTHO05D005616 9.4e-123 443.7 256 84.8
Cc01_g18870 Coffea canephora HOM05D000319 ORTHO05D005616 2.1e-122 442.6 256 84.4
CAN.G1072.4 Capsicum annuum HOM05D000319 ORTHO05D005616 6.1e-122 441.0 255 82.0
AUR62011945 Chenopodium quinoa HOM05D000319 ORTHO05D005616 6.1e-122 441.0 256 83.2
Sopen09g027620 Solanum pennellii HOM05D000319 ORTHO05D005616 1.0e-121 440.3 254 83.9
Gorai.001G242600 Gossypium raimondii HOM05D000319 ORTHO05D005616 1.4e-121 439.9 256 83.6
EL10Ac5g10471 Beta vulgaris HOM05D000319 ORTHO05D005616 1.8e-121 439.5 256 83.6
Nitab4.5_0003053g0020 Nicotiana tabacum HOM05D000319 ORTHO05D005616 3.9e-121 438.3 255 83.1
Nitab4.5_0000187g0170 Nicotiana tabacum HOM05D000319 ORTHO05D005616 6.7e-121 437.6 255 82.7
PGSC0003DMG400019303 Solanum tuberosum HOM05D000319 ORTHO05D005616 8.8e-121 437.2 254 82.7
Nn3g19503 Nelumbo nucifera HOM05D000319 ORTHO05D005616 1.5e-120 436.4 255 82.7
Gohir.A07G208700 Gossypium hirsutum HOM05D000319 ORTHO05D005616 2.0e-120 436.0 256 82.8
unitig_26.g10148 Utricularia gibba HOM05D000319 ORTHO05D005616 1.3e-119 433.3 256 82.4
Psat5g303080 Pisum sativum HOM05D000319 ORTHO05D005616 1.7e-119 433.0 256 83.6
Hund09567 Selenicereus undatus HOM05D000319 ORTHO05D005616 3.7e-119 431.8 256 81.2
Gohir.D07G214600 Gossypium hirsutum HOM05D000319 ORTHO05D005616 6.3e-119 431.0 256 82.0
Sabra02G0036300 Salix brachista HOM05D000319 ORTHO05D005616 1.1e-118 430.3 307 72.3
VMungo1080G0987 Vigna mungo HOM05D000319 ORTHO05D005616 4.1e-118 428.3 241 87.1
FAN09G4049 Fragaria x ananassa HOM05D000319 ORTHO05D005616 1.5e-117 426.4 241 87.1
CDE06G1797 Ceratophyllum demersum HOM05D000319 ORTHO05D005616 2.0e-117 426.0 257 79.4
ATR0665G648 Amborella trichopoda HOM05D000319 ORTHO05D005616 2.9e-116 422.2 257 78.6
Sed0021269 Sechium edule HOM05D000319 ORTHO05D005616 5.0e-116 421.4 256 81.6
vmacro02626 Vaccinium macrocarpon HOM05D000319 ORTHO05D005616 5.5e-115 417.9 283 74.6
CDE07G0560 Ceratophyllum demersum HOM05D000319 ORTHO05D005616 7.2e-115 417.5 257 77.4
Os05g0509200 Oryza sativa ssp. japonica HOM05D000319 ORTHO05D005616 3.6e-114 415.2 270 74.1
SGA_v2.0_scaffold138G35283 Striga asiatica HOM05D000319 ORTHO05D005616 2.0e-112 409.5 295 72.5
Zm00001eb292370 Zea mays HOM05D000319 ORTHO05D005616 1.3e-111 406.8 232 80.6
HanXRQChr01g0006871 Helianthus annuus HOM05D000319 ORTHO05D005616 1.6e-109 399.8 260 78.8
arahy.Tifrunner.gnm1.ann1.0F4L5T Arachis hypogaea HOM05D000319 ORTHO05D005616 3.8e-108 395.2 256 79.3
Dinv22483 Davidia involucrata HOM05D000319 ORTHO05D005616 3.6e-106 388.7 220 85.0
SMO361G0598 Selaginella moellendorffii HOM05D000319 ORTHO05D005616 1.2e-104 383.6 230 77.8
AagrBONN_evm.TU.Sc2ySwM_368.222 Anthoceros agrestis HOM05D000319 ORTHO05D005616 1.5e-104 383.3 231 76.2
BolC2t09938H Brassica oleracea HOM05D000319 ORTHO05D005616 2.6e-104 382.5 250 78.8
Mapoly0103s0061 Marchantia polymorpha HOM05D000319 ORTHO05D005616 3.7e-103 378.6 253 70.4
MBI11_g38515_MAGBIO Magnolia biondii HOM05D000319 ORTHO05D005616 6.3e-103 377.9 260 73.8
Pp3c14_11220 Physcomitrium patens HOM05D000319 ORTHO05D005616 2.2e-100 369.4 232 74.1
Pp3c2_9810 Physcomitrium patens HOM05D000319 ORTHO05D005616 1.1e-99 367.1 233 73.8
Pp3c2_9813 Physcomitrium patens HOM05D000319 ORTHO05D005616 1.1e-99 367.1 233 73.8
Sabra05G0167100 Salix brachista HOM05D000319 ORTHO05D005616 2.1e-98 362.8 320 62.8
FAN02G2104 Fragaria x ananassa HOM05D000319 ORTHO05D005616 4.7e-98 361.7 241 78.0
HPP92_010274 Vanilla planifolia HOM05D000319 ORTHO05D005616 8.8e-97 357.5 260 70.0
Duzib133G0192 Durio zibethinus HOM05D000319 ORTHO05D005616 1.3e-95 353.6 256 70.7
SEGI_22234 Sequoiadendron giganteum HOM05D000319 ORTHO05D005616 1.7e-95 353.2 200 82.5
CBR_g10938 Chara braunii HOM05D000319 ORTHO05D005616 3.7e-95 352.1 257 66.9
HPP92_010249 Vanilla planifolia HOM05D000319 ORTHO05D005616 1.4e-94 350.1 260 70.0
CBR_g36360 Chara braunii HOM05D000319 ORTHO05D005616 1.2e-93 347.1 257 65.8
BcaB05g23646 Brassica carinata HOM05D000319 ORTHO05D005616 1.5e-91 340.1 286 67.1
BcaC03g16149 Brassica carinata HOM05D000319 ORTHO05D005616 6.3e-87 324.7 201 80.1
QL03p046056 Quercus lobata HOM05D000319 ORTHO05D005616 3.4e-80 302.4 160 89.4
Oeu058799.1 Olea europaea HOM05D000319 ORTHO05D005616 4.4e-80 302.0 161 88.8
PRCOL_00000415 Prasinoderma coloniale HOM05D000319 ORTHO05D005616 5.8e-80 301.6 246 58.5
Solyc09g065830.4 Solanum lycopersicum HOM05D000319 ORTHO05D005616 4.9e-79 298.5 162 86.4
Lalb_Chr24g0395411 Lupinus albus HOM05D000319 ORTHO05D005616 7.8e-77 291.2 172 84.9
HPP92_010181 Vanilla planifolia HOM05D000319 ORTHO05D005616 1.2e-72 277.3 175 78.3
Cre10.g450400 Chlamydomonas reinhardtii HOM05D000319 ORTHO05D005616 5.4e-70 268.5 234 53.0
SGA_v2.0_scaffold580G53039 Striga asiatica HOM05D000319 ORTHO05D005616 1.2e-69 267.3 162 81.5
C02p39270 Brassica napus HOM05D000319 ORTHO05D021913 5.1e-68 261.9 135 91.9
FAN05G4646 Fragaria x ananassa HOM05D000319 ORTHO05D005616 1.2e-66 257.3 269 56.5
Carub.0006s0058 Capsella rubella HOM05D000319 ORTHO05D005616 3.3e-59 232.6 116 97.4
CAN.G2529.1 Capsicum annuum HOM05D000319 ORTHO05D005616 8.9e-57 224.6 118 89.8
Cfa025181 Carpinus fangiana HOM05D000319 ORTHO05D005616 1.8e-49 200.3 187 48.7
Peaxi162Scf00049g02221 Petunia axillaris HOM05D000319 ORTHO05D005616 9.9e-48 194.5 101 94.1
Haze_26296 Corylus avellana HOM05D000319 ORTHO05D005616 6.6e-44 181.8 230 43.9
Lj1A57T50 Lonicera japonica HOM05D000319 ORTHO05D005616 2.5e-43 179.9 121 72.7
CSS0010087 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D005616 5.6e-43 178.7 100 86.0
Oeu002275.1 Olea europaea HOM05D000319 ORTHO05D005616 2.1e-42 176.8 165 58.8
Psat5g267520 Pisum sativum HOM05D000319 ORTHO05D005616 5.8e-40 168.7 83 92.8
Lalb_Chr24g0395401 Lupinus albus HOM05D000319 ORTHO05D005616 5.4e-38 162.2 84 85.7
Oeu058801.1 Olea europaea HOM05D000113 ORTHO05D010194 8.7e-36 154.8 101 77.2
Gohir.D03G127200 Gossypium hirsutum HOM05D000319 ORTHO05D005616 4.3e-35 152.5 89 79.8
Gorai.007G009700 Gossypium raimondii HOM05D000319 ORTHO05D005616 1.6e-34 150.6 83 83.1
QL03p046047 Quercus lobata HOM05D000319 ORTHO05D005616 1.1e-33 147.9 97 79.4
Gohir.D08G101900 Gossypium hirsutum HOM05D000319 ORTHO05D005616 9.0e-33 144.8 89 76.4
Gorai.004G109900 Gossypium raimondii HOM05D000319 ORTHO05D005616 2.0e-32 143.7 89 75.3
Gohir.D11G034350 Gossypium hirsutum HOM05D000319 ORTHO05D015684 7.6e-32 141.7 77 83.1
Gorai.011G177500 Gossypium raimondii HOM05D000319 ORTHO05D015684 2.9e-31 139.8 89 74.2
Gorai.007G037200 Gossypium raimondii HOM05D000319 ORTHO05D015684 1.6e-29 134.0 81 77.8
Gohir.D02G148240 Gossypium hirsutum HOM05D000319 ORTHO05D015684 2.7e-29 133.3 81 77.8
Gorai.008G258400 Gossypium raimondii HOM05D000319 ORTHO05D015684 5.1e-28 129.0 81 75.3
Gohir.A10G159900 Gossypium hirsutum HOM05D000319 ORTHO05D015684 8.7e-28 128.3 75 78.7
Gohir.A12G213400 Gossypium hirsutum HOM05D000319 ORTHO05D015684 8.7e-28 128.3 75 78.7
Gohir.D05G290500 Gossypium hirsutum HOM05D000319 ORTHO05D015684 8.7e-28 128.3 75 78.7
Gohir.D12G241200 Gossypium hirsutum HOM05D000319 ORTHO05D015684 8.7e-28 128.3 75 78.7
Psat2g121280 Pisum sativum HOM05D000319 ORTHO05D005616 1.1e-27 127.9 84 76.2
Gohir.A02G064600 Gossypium hirsutum HOM05D000319 ORTHO05D015684 3.3e-27 126.3 75 77.3
Gorai.005G095000 Gossypium raimondii HOM05D000319 ORTHO05D015684 1.1e-25 121.3 75 74.7
Psat4g011320 Pisum sativum HOM05D000319 ORTHO05D005616 3.1e-25 119.8 82 75.6
Gohir.D03G105033 Gossypium hirsutum HOM05D000319 ORTHO05D005616 6.9e-25 118.6 71 77.5
Gorai.003G111100 Gossypium raimondii HOM05D000319 ORTHO05D015684 2.6e-24 116.7 76 73.7
Lj1A57T51 Lonicera japonica HOM05D000319 ORTHO05D005616 3.3e-11 73.2 42 81.0
GSVIVG01013142001 Vitis vinifera HOM05D000319 ORTHO05D439463 2.4e-09 67.0 56 64.3


User provided reference genes

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