Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 1.1e-128 463.4 253 100.0
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 1.9e-123 446.0 253 93.7
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 1.7e-121 439.5 253 92.1
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 8.1e-119 430.6 254 89.8
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 1.8e-118 429.5 254 90.9
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 1.3e-116 423.3 254 90.2
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 2.7e-114 415.6 254 85.8
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 5.1e-113 411.4 254 85.4
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 9.6e-112 407.1 254 85.0
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 9.6e-112 407.1 254 85.0
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 6.2e-111 404.4 249 84.3
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 2.3e-105 386.0 255 82.7
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 1.4e-99 366.7 253 76.3
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 2.5e-99 365.9 253 78.7
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 6.3e-95 351.3 255 72.5
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 3.1e-86 322.4 254 67.3
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 4.1e-86 322.0 253 65.6
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 2.2e-84 316.2 253 65.2
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 3.2e-83 312.4 254 64.2
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 5.5e-83 311.6 254 65.0
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 1.2e-82 310.5 254 64.6
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 3.6e-82 308.9 253 63.6
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 6.1e-82 308.1 254 63.8
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 7.9e-82 307.8 254 65.4
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 1.4e-81 307.0 254 64.6
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 3.3e-80 302.4 253 63.2
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 2.8e-79 299.3 254 63.0
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 8.2e-79 297.7 253 61.3
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 4.1e-78 295.4 253 61.3
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 1.7e-76 290.0 253 60.5
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 2.7e-74 282.7 256 62.1
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 1.0e-73 280.8 256 61.7
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 1.0e-73 280.8 256 61.7
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 3.0e-73 279.3 259 61.8
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 3.9e-73 278.9 256 60.2
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 3.9e-73 278.9 253 59.7
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 6.7e-73 278.1 257 61.1
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 9.7e-72 274.2 258 58.5
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 2.2e-71 273.1 258 58.5
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 2.2e-71 273.1 256 59.4
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 4.8e-71 271.9 258 57.8
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 3.5e-69 265.8 255 57.3
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 3.5e-69 265.8 255 57.3
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 4.5e-69 265.4 254 55.9
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 5.9e-69 265.0 257 57.2
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 2.9e-68 262.7 256 56.2
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 2.9e-68 262.7 251 57.4
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 3.8e-68 262.3 246 57.7
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 3.8e-68 262.3 251 59.0
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 5.0e-68 261.9 253 55.3
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 6.5e-68 261.5 252 54.8
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 1.5e-67 260.4 255 56.9
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 1.9e-67 260.0 257 54.9
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 2.5e-67 259.6 238 60.1
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 2.5e-67 259.6 254 55.5
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 4.2e-67 258.8 257 54.5
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 5.5e-67 258.5 260 57.3
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 9.4e-67 257.7 250 56.8
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 1.2e-66 257.3 258 54.3
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 1.6e-66 256.9 253 56.9
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 2.1e-66 256.5 252 54.4
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 2.1e-66 256.5 256 55.9
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 3.6e-66 255.8 257 53.7
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 6.1e-66 255.0 248 56.0
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 1.4e-65 253.8 242 57.4
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 1.4e-65 253.8 260 53.5
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 2.3e-65 253.1 262 54.2
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 2.3e-65 253.1 256 55.9
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 4.0e-65 252.3 252 56.0
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 2.0e-64 250.0 253 53.4
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 2.0e-64 250.0 253 53.4
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 7.5e-64 248.1 244 57.8
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 7.5e-64 248.1 256 55.9
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 1.3e-63 247.3 243 56.0
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 2.8e-63 246.1 251 56.6
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 3.7e-63 245.7 255 55.7
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 3.7e-63 245.7 259 52.1
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 6.3e-63 245.0 255 55.3
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 6.3e-63 245.0 253 55.7
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 8.2e-63 244.6 254 53.5
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 8.2e-63 244.6 178 69.1
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 1.4e-62 243.8 245 55.5
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 1.4e-62 243.8 253 53.0
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 1.4e-62 243.8 245 55.9
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 3.1e-62 242.7 253 55.3
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 5.3e-62 241.9 256 53.5
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 5.3e-62 241.9 245 55.9
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 1.6e-61 240.4 256 54.7
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 2.0e-61 240.0 243 56.8
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 4.5e-61 238.8 251 56.2
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 5.9e-61 238.4 231 58.0
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 2.9e-60 236.1 259 50.2
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 2.9e-60 236.1 243 55.1
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 3.8e-60 235.7 243 55.1
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 5.0e-60 235.3 251 55.0
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 6.5e-60 235.0 246 54.5
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 6.5e-60 235.0 239 54.8
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 4.2e-59 232.3 247 55.1
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 1.0e-57 227.6 258 52.7
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 1.4e-57 227.3 263 51.0
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 1.2e-56 224.2 253 51.4
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 3.4e-56 222.6 265 49.1
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 4.4e-56 222.2 240 53.3
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 1.7e-55 220.3 241 51.9
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 2.2e-55 219.9 243 53.9
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 1.4e-54 217.2 253 51.8
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 2.7e-53 213.0 253 50.6
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 5.9e-53 211.8 244 51.2
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 5.0e-52 208.8 253 47.8
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 2.3e-49 199.9 233 50.2
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 4.5e-45 185.7 183 55.2
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 2.3e-44 183.3 124 75.0
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 3.6e-42 176.0 195 52.3
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 8.3e-39 164.9 131 65.6
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 1.3e-36 157.5 191 48.2
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 5.8e-24 115.5 131 50.4
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 5.8e-24 115.5 180 39.4
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 2.9e-23 113.2 256 34.8
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 5.4e-22 109.0 173 41.0
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 2.1e-21 107.1 144 43.1
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 1.0e-20 104.8 137 46.7
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 2.1e-18 97.1 75 68.0
FvH4_6g03230 Fragaria vesca HOM05D005854 ORTHO05D007175 6.2e-18 95.5 108 50.9
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 4.4e-16 89.4 79 65.8
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 2.4e-14 83.6 157 38.9
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 4.6e-13 79.3 95 48.4
FvH4_6g03240 Fragaria vesca HOM05D005854 ORTHO05D007175 1.4e-09 67.8 62 53.2
Lsat_1_v5_gn_4_144561 Lactuca sativa HOM05D005854 ORTHO05D007175 5.2e-09 65.9 117 35.9
Nn3g18457 Nelumbo nucifera HOM05D005854 ORTHO05D007175 3.4e-08 63.2 83 43.4
RcHm_v2.0_Chr3g0451651 Rosa chinensis HOM05D005854 ORTHO05D007175 2.9e-07 60.1 53 58.5


User provided reference genes

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