Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G43600 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 1.3e-90 336.3 164 100.0
Carub.0004s2671 Capsella rubella HOM05D003257 ORTHO05D003749 4.1e-79 298.1 145 97.2
AL4G43040 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 6.9e-79 297.4 145 97.2
AL4G43080 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 6.9e-79 297.4 145 97.2
Thhalv10001367m.g Eutrema salsugineum HOM05D003257 ORTHO05D003749 1.2e-78 296.6 145 97.2
BolC4t22138H Brassica oleracea HOM05D003257 ORTHO05D003749 2.0e-78 295.8 145 97.2
Sp4g26240 Schrenkiella parvula HOM05D003257 ORTHO05D003749 2.0e-78 295.8 145 97.2
BcaB01g03327 Brassica carinata HOM05D003257 ORTHO05D003749 4.5e-78 294.7 145 96.6
BcaC02g12332 Brassica carinata HOM05D003257 ORTHO05D003749 5.9e-78 294.3 145 96.6
AT2G44160 Arabidopsis thaliana HOM05D003257 ORTHO05D003749 2.2e-77 292.4 145 94.5
A05p04270 Brassica napus HOM05D003257 ORTHO05D003749 3.8e-77 291.6 145 94.5
BraA05t19412Z Brassica rapa HOM05D003257 ORTHO05D003749 3.8e-77 291.6 145 94.5
C04p05050 Brassica napus HOM05D003257 ORTHO05D003749 8.5e-77 290.4 145 95.9
CARHR139330 Cardamine hirsuta HOM05D003257 ORTHO05D003749 2.5e-76 288.9 145 94.5
BcaB06g29361 Brassica carinata HOM05D003257 ORTHO05D003749 2.3e-74 282.3 145 91.0
A04p33220 Brassica napus HOM05D003257 ORTHO05D003749 2.3e-74 282.3 145 91.0
C04p70910 Brassica napus HOM05D003257 ORTHO05D003749 2.3e-74 282.3 145 91.0
BraA04t18781Z Brassica rapa HOM05D003257 ORTHO05D003749 2.3e-74 282.3 145 91.0
BcaB06g29359 Brassica carinata HOM05D003257 ORTHO05D003749 3.3e-73 278.5 145 89.7
AT3G59970 Arabidopsis thaliana HOM05D003257 ORTHO05D003749 2.6e-70 268.9 145 86.2
Aa31LG10G14190 Aethionema arabicum HOM05D003257 ORTHO05D003749 5.9e-70 267.7 145 86.9
AL5G42150 Arabidopsis lyrata HOM05D003257 ORTHO05D003749 2.2e-69 265.8 145 85.5
Carub.0005s2670 Capsella rubella HOM05D003257 ORTHO05D003749 3.8e-69 265.0 145 84.8
AL5G24360 Arabidopsis lyrata HOM05D003257 ORTHO05D001652 8.5e-69 263.8 135 94.8
Thhalv10005854m.g Eutrema salsugineum HOM05D003257 ORTHO05D003749 8.5e-69 263.8 145 85.5
THA.LOC104804412 Tarenaya hassleriana HOM05D003257 ORTHO05D003749 1.1e-68 263.5 145 82.8
BcaC08g45017 Brassica carinata HOM05D003257 ORTHO05D003749 1.5e-68 263.1 145 84.8
C06p26490 Brassica napus HOM05D003257 ORTHO05D003749 1.5e-68 263.1 145 84.8
BolC6t37812H Brassica oleracea HOM05D003257 ORTHO05D003749 1.5e-68 263.1 145 84.8
A07p24920 Brassica napus HOM05D003257 ORTHO05D003749 1.9e-68 262.7 145 84.8
BraA07t30134Z Brassica rapa HOM05D003257 ORTHO05D003749 1.9e-68 262.7 145 84.8
THA.LOC104802525 Tarenaya hassleriana HOM05D003257 ORTHO05D003749 1.9e-68 262.7 145 83.4
CARHR170290 Cardamine hirsuta HOM05D003257 ORTHO05D003749 5.5e-68 261.2 145 84.1
A09p52310 Brassica napus HOM05D003257 ORTHO05D003749 9.4e-68 260.4 145 83.4
Prupe.7G271500 Prunus persica HOM05D003257 ORTHO05D003749 9.4e-68 260.4 145 82.8
Aa31LG1G25830 Aethionema arabicum HOM05D003257 ORTHO05D003749 1.6e-67 259.6 159 78.6
Sp5g03210 Schrenkiella parvula HOM05D003257 ORTHO05D003749 1.6e-67 259.6 145 84.1
MD15G1141700 Malus domestica HOM05D003257 ORTHO05D003749 2.1e-67 259.2 145 84.1
BcaC07g40537 Brassica carinata HOM05D003257 ORTHO05D003749 2.7e-67 258.8 145 83.4
C08p34970 Brassica napus HOM05D003257 ORTHO05D003749 2.7e-67 258.8 145 83.4
BolC8t51101H Brassica oleracea HOM05D003257 ORTHO05D003749 2.7e-67 258.8 145 83.4
BraA09t40660Z Brassica rapa HOM05D003257 ORTHO05D003749 2.7e-67 258.8 145 82.8
BcaC07g40402 Brassica carinata HOM05D003257 ORTHO05D003749 3.6e-67 258.5 145 82.8
MD02G1001200 Malus domestica HOM05D003257 ORTHO05D003749 3.6e-67 258.5 145 82.1
Atru.chr3.2621 Acer truncatum HOM05D003257 ORTHO05D003749 4.7e-67 258.1 145 81.4
FvH4_1g00040 Fragaria vesca HOM05D003257 ORTHO05D003749 8.0e-67 257.3 145 80.7
FAN26G1737 Fragaria x ananassa HOM05D003257 ORTHO05D003749 8.0e-67 257.3 145 80.7
FAN28G1981 Fragaria x ananassa HOM05D003257 ORTHO05D003749 8.0e-67 257.3 145 80.7
Cfa008541 Carpinus fangiana HOM05D003257 ORTHO05D003749 1.0e-66 256.9 145 80.0
Potri.007G147300 Populus trichocarpa HOM05D003257 ORTHO05D003749 1.4e-66 256.5 145 80.7
RcHm_v2.0_Chr2g0084261 Rosa chinensis HOM05D003257 ORTHO05D003749 1.8e-66 256.1 145 80.0
Ah.07g203400 Amaranthus hybridus HOM05D003257 ORTHO05D003749 2.3e-66 255.8 145 79.3
FAN23G0512 Fragaria x ananassa HOM05D003257 ORTHO05D003749 2.3e-66 255.8 145 80.0
Haze_11091 Corylus avellana HOM05D003257 ORTHO05D003749 3.0e-66 255.4 145 79.3
Potri.017G000300 Populus trichocarpa HOM05D003257 ORTHO05D003749 1.2e-65 253.4 145 79.3
Glyma.04G256100 Glycine max HOM05D003257 ORTHO05D003749 1.5e-65 253.1 145 80.7
TAR362G0403 Trochodendron aralioides HOM05D003257 ORTHO05D003749 1.5e-65 253.1 145 80.0
AUR62002512 Chenopodium quinoa HOM05D003257 ORTHO05D003749 2.0e-65 252.7 145 78.6
Solyc11g008870.2 Solanum lycopersicum HOM05D003257 ORTHO05D003749 2.0e-65 252.7 145 77.9
Sopen11g004650 Solanum pennellii HOM05D003257 ORTHO05D003749 2.0e-65 252.7 145 77.9
Sabra17G0005200 Salix brachista HOM05D003257 ORTHO05D003749 2.6e-65 252.3 145 79.3
arahy.Tifrunner.gnm1.ann1.BPEV7T Arachis hypogaea HOM05D003257 ORTHO05D003749 5.7e-65 251.1 145 80.7
CAN.G1177.14 Capsicum annuum HOM05D003257 ORTHO05D003749 5.7e-65 251.1 145 78.6
CiPaw.02G126200 Carya illinoinensis HOM05D003257 ORTHO05D003749 5.7e-65 251.1 145 78.6
AUR62023682 Chenopodium quinoa HOM05D003257 ORTHO05D003749 5.7e-65 251.1 145 77.9
PGSC0003DMG400016168 Solanum tuberosum HOM05D003257 ORTHO05D003749 5.7e-65 251.1 145 78.6
Ciclev10019406m.g Citrus clementina HOM05D003257 ORTHO05D003749 7.5e-65 250.8 145 81.4
Dinv24735 Davidia involucrata HOM05D003257 ORTHO05D003749 9.7e-65 250.4 145 77.2
Glyma.06G325300 Glycine max HOM05D003257 ORTHO05D003749 9.7e-65 250.4 145 80.0
Nitab4.5_0001653g0120 Nicotiana tabacum HOM05D003257 ORTHO05D003749 1.3e-64 250.0 145 77.9
Oeu028194.1 Olea europaea HOM05D003257 ORTHO05D003749 1.3e-64 250.0 145 80.7
Gohir.D10G138300 Gossypium hirsutum HOM05D003257 ORTHO05D003749 1.7e-64 249.6 145 81.4
vmacro00737 Vaccinium macrocarpon HOM05D003257 ORTHO05D003749 1.7e-64 249.6 146 80.1
arahy.Tifrunner.gnm1.ann1.ZYH4BX Arachis hypogaea HOM05D003257 ORTHO05D003749 2.2e-64 249.2 145 80.0
MELO3C027379.2 Cucumis melo HOM05D003257 ORTHO05D003749 2.2e-64 249.2 145 78.6
QL10p065198 Quercus lobata HOM05D003257 ORTHO05D003749 2.2e-64 249.2 145 78.6
TWI15G1037 Tripterygium wilfordii HOM05D003257 ORTHO05D003749 2.2e-64 249.2 145 79.3
CsaV3_2G011840 Cucumis sativus L. HOM05D003257 ORTHO05D003749 4.8e-64 248.1 145 78.6
PGR042G2645 Punica granatum HOM05D003257 ORTHO05D003749 4.8e-64 248.1 146 80.1
Eucgr.A00394 Eucalyptus grandis HOM05D003257 ORTHO05D003749 6.3e-64 247.7 146 78.8
Sed0018493 Sechium edule HOM05D003257 ORTHO05D003749 8.2e-64 247.3 145 79.3
TPR.G30222 Trifolium pratense HOM05D003257 ORTHO05D003749 8.2e-64 247.3 145 80.0
Gorai.011G153400 Gossypium raimondii HOM05D003257 ORTHO05D003749 1.1e-63 246.9 145 80.7
Peaxi162Scf00344g00056 Petunia axillaris HOM05D003257 ORTHO05D003749 1.1e-63 246.9 145 77.9
Rhsim09G0000900 Rhododendron simsii HOM05D003257 ORTHO05D003749 1.1e-63 246.9 146 78.8
CSS0030539 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 1.4e-63 246.5 145 76.6
Peaxi162Scf00156g00015 Petunia axillaris HOM05D003257 ORTHO05D003749 1.4e-63 246.5 148 76.4
Migut.N03006 Erythranthe guttata HOM05D003257 ORTHO05D003749 1.8e-63 246.1 145 76.6
Gohir.A10G127700 Gossypium hirsutum HOM05D003257 ORTHO05D003749 1.8e-63 246.1 149 78.5
Cpa.g.sc9.233 Carica papaya HOM05D003257 ORTHO05D003749 2.4e-63 245.7 145 77.2
CiPaw.01G204000 Carya illinoinensis HOM05D003257 ORTHO05D003749 2.4e-63 245.7 145 77.2
TAR633G0285 Trochodendron aralioides HOM05D003257 ORTHO05D003749 2.4e-63 245.7 145 78.6
EL10Ac3g06195 Beta vulgaris HOM05D003257 ORTHO05D003749 3.1e-63 245.4 145 77.9
ClCG06G008390 Citrullus lanatus HOM05D003257 ORTHO05D003749 3.1e-63 245.4 145 77.9
Duzib212G0020 Durio zibethinus HOM05D003257 ORTHO05D003749 3.1e-63 245.4 145 78.6
Sc19g0002470 Simmondsia chinensis HOM05D003257 ORTHO05D003749 3.1e-63 245.4 145 78.6
Actinidia18382 Actinidia chinensis HOM05D003257 ORTHO05D003749 4.1e-63 245.0 145 77.9
DCAR_027487 Daucus carota HOM05D003257 ORTHO05D003749 4.1e-63 245.0 145 77.9
Nitab4.5_0000971g0090 Nicotiana tabacum HOM05D003257 ORTHO05D003749 4.1e-63 245.0 145 75.2
Thecc.04G195400 Theobroma cacao HOM05D003257 ORTHO05D003749 4.1e-63 245.0 149 77.9
Phvul.007G281200 Phaseolus vulgaris HOM05D003257 ORTHO05D003749 5.3e-63 244.6 145 77.9
VMungo0647G2577 Vigna mungo HOM05D003257 ORTHO05D003749 5.3e-63 244.6 145 77.2
Lj3g0005174 Lotus japonicus HOM05D003257 ORTHO05D003749 7.0e-63 244.2 145 77.9
Medtr1g040105 Medicago truncatula HOM05D003257 ORTHO05D003749 7.0e-63 244.2 145 77.9
GSVIVG01019374001 Vitis vinifera HOM05D003257 ORTHO05D003749 7.0e-63 244.2 145 77.2
Ca_26297_v3 Cicer arietinum L. HOM05D003257 ORTHO05D003749 9.1e-63 243.8 145 79.3
Lalb_Chr03g0037991 Lupinus albus HOM05D003257 ORTHO05D003749 1.2e-62 243.4 145 77.9
Aqoxy2G00629 Aquilegia oxysepala HOM05D003257 ORTHO05D003749 1.6e-62 243.0 145 78.6
CANSAT56G2399 Cannabis sativa HOM05D003257 ORTHO05D003749 1.6e-62 243.0 146 78.1
Manes.01G008800 Manihot esculenta HOM05D003257 ORTHO05D003749 2.0e-62 242.7 145 77.2
Sc25g0002280 Simmondsia chinensis HOM05D003257 ORTHO05D003749 2.0e-62 242.7 145 76.6
CANSAT54G2167 Cannabis sativa HOM05D003257 ORTHO05D003749 2.7e-62 242.3 146 77.4
Nitab4.5_0003263g0060 Nicotiana tabacum HOM05D003257 ORTHO05D003749 2.7e-62 242.3 145 75.2
Nn7g37414 Nelumbo nucifera HOM05D003257 ORTHO05D003749 3.5e-62 241.9 145 76.6
CSS0014401 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 4.5e-62 241.5 145 75.9
CSS0029511 Camellia sinensis var. sinensis HOM05D003257 ORTHO05D003749 4.5e-62 241.5 145 75.9
Gorai.006G223600 Gossypium raimondii HOM05D003257 ORTHO05D003749 5.9e-62 241.1 145 77.9
SalBow6G1509 Salvia bowleyana HOM05D003257 ORTHO05D003749 5.9e-62 241.1 145 76.6
Duzib151G0199 Durio zibethinus HOM05D003257 ORTHO05D003749 7.7e-62 240.7 145 77.9
DCAR_005464 Daucus carota HOM05D003257 ORTHO05D003749 1.3e-61 240.0 145 73.8
Lju124A8T11 Lonicera japonica HOM05D003257 ORTHO05D003749 1.3e-61 240.0 146 76.7
PSO339G3074 Papaver somniferum HOM05D003257 ORTHO05D003749 1.7e-61 239.6 145 76.6
PGSC0003DMG400023361 Solanum tuberosum HOM05D003257 ORTHO05D003749 1.7e-61 239.6 145 75.9
Gohir.A09G206300 Gossypium hirsutum HOM05D003257 ORTHO05D003749 2.2e-61 239.2 145 77.2
Lalb_Chr01g0020651 Lupinus albus HOM05D003257 ORTHO05D003749 2.2e-61 239.2 145 76.6
Psat6g114760 Pisum sativum HOM05D003257 ORTHO05D003749 2.9e-61 238.8 145 75.9
Solyc05g055730.4 Solanum lycopersicum HOM05D003257 ORTHO05D003749 2.9e-61 238.8 145 75.9
PSO384G1169 Papaver somniferum HOM05D003257 ORTHO05D003749 5.0e-61 238.0 145 75.9
SGA_v2.0_scaffold19G08917 Striga asiatica HOM05D003257 ORTHO05D003749 6.5e-61 237.7 145 75.9
Gohir.D09G199900 Gossypium hirsutum HOM05D003257 ORTHO05D003749 8.5e-61 237.3 145 76.6
Nn1g09394 Nelumbo nucifera HOM05D003257 ORTHO05D003749 8.5e-61 237.3 145 73.8
unitig_27.g25139 Utricularia gibba HOM05D003257 ORTHO05D003749 1.1e-60 236.9 145 75.2
CAN.G694.27 Capsicum annuum HOM05D003257 ORTHO05D003749 1.9e-60 236.1 145 75.9
CDE06G0339 Ceratophyllum demersum HOM05D003257 ORTHO05D003749 1.9e-60 236.1 145 74.5
ATR0053G017 Amborella trichopoda HOM05D003257 ORTHO05D003749 2.5e-60 235.7 145 74.5
Duzib268G1600 Durio zibethinus HOM05D003257 ORTHO05D003749 2.5e-60 235.7 145 75.2
Os03g0815200 Oryza sativa ssp. japonica HOM05D003257 ORTHO05D003749 2.5e-60 235.7 144 76.4
Sed0024427 Sechium edule HOM05D003257 ORTHO05D003749 3.2e-60 235.3 145 75.2
Sopen05g034140 Solanum pennellii HOM05D003257 ORTHO05D003749 3.2e-60 235.3 145 74.5
SGA_v2.0_scaffold12G06250 Striga asiatica HOM05D003257 ORTHO05D003749 1.2e-59 233.4 145 74.5
Zm00001eb062180 Zea mays HOM05D003257 ORTHO05D003749 1.2e-59 233.4 144 75.7
Zm00001eb440710 Zea mays HOM05D003257 ORTHO05D003749 1.2e-59 233.4 144 75.7
MSTRG.24536 Avicennia marina HOM05D003257 ORTHO05D003749 1.6e-59 233.0 145 73.8
Hund22692 Selenicereus undatus HOM05D003257 ORTHO05D003749 2.1e-59 232.6 170 68.2
HanXRQChr06g0170341 Helianthus annuus HOM05D003257 ORTHO05D003749 4.7e-59 231.5 145 75.2
AagrBONN_evm.TU.Sc2ySwM_344.3446 Anthoceros agrestis HOM05D003257 ORTHO05D003749 1.4e-58 229.9 144 75.0
ECA236G5120 Erigeron canadensis HOM05D003257 ORTHO05D003749 3.0e-58 228.8 145 73.1
HanXRQChr04g0120771 Helianthus annuus HOM05D003257 ORTHO05D003749 4.0e-58 228.4 145 74.5
Lsat_1_v5_gn_7_3921 Lactuca sativa HOM05D003257 ORTHO05D003749 6.8e-58 227.6 145 72.4
SEGI_28465 Sequoiadendron giganteum HOM05D003257 ORTHO05D003749 2.0e-57 226.1 145 72.4
SalBow3G4227 Salvia bowleyana HOM05D003257 ORTHO05D003749 1.7e-56 223.0 145 70.3
SGA_v2.0_scaffold25G11024 Striga asiatica HOM05D003257 ORTHO05D003749 6.3e-56 221.1 136 76.5
COL.COLO4_20225 Corchorus olitorius HOM05D003257 ORTHO05D003749 5.4e-55 218.0 141 73.8
Pp3c10_24030 Physcomitrium patens HOM05D003257 ORTHO05D003749 5.4e-55 218.0 144 68.8
Pp3c24_960 Physcomitrium patens HOM05D003257 ORTHO05D003749 5.4e-55 218.0 144 69.4
SMO367G0955 Selaginella moellendorffii HOM05D003257 ORTHO05D003749 7.7e-54 214.2 144 68.8
Mapoly0107s0040 Marchantia polymorpha HOM05D003257 ORTHO05D003749 2.3e-53 212.6 144 68.1
Nitab4.5_0006595g0040 Nicotiana tabacum HOM05D003257 ORTHO05D003749 3.6e-51 205.3 145 67.6
CBR_g37215 Chara braunii HOM05D003257 ORTHO05D003749 4.0e-50 201.8 145 64.1
CAN.G532.79 Capsicum annuum HOM05D003257 ORTHO05D003749 6.3e-48 194.5 145 65.5
CDE07G1142 Ceratophyllum demersum HOM05D003257 ORTHO05D003749 5.8e-41 171.4 100 75.0
Hma1.2p1_1372F.1_g278690 Hydrangea macrophylla HOM05D003257 ORTHO05D003749 1.7e-40 169.9 146 57.5
RcHm_v2.0_Chr1g0319671 Rosa chinensis HOM05D003257 ORTHO05D003749 3.7e-40 168.7 148 60.8
Cre10.g433600 Chlamydomonas reinhardtii HOM05D003257 ORTHO05D003749 1.6e-38 163.3 145 55.2
BcaB01g06154 Brassica carinata HOM05D003257 ORTHO05D003749 5.0e-37 158.3 92 80.4
MBI15_g33461_MAGBIO Magnolia biondii HOM05D003257 ORTHO05D003749 1.5e-36 156.8 94 77.7
VMungo0464G1907 Vigna mungo HOM05D003257 ORTHO05D003749 1.5e-36 156.8 91 76.9
FvH4_7g02331 Fragaria vesca HOM05D003257 ORTHO05D003749 5.6e-36 154.8 145 56.6
PRCOL_00004214 Prasinoderma coloniale HOM05D003257 ORTHO05D003749 1.6e-35 153.3 145 49.0
Actinidia02460 Actinidia chinensis HOM05D003257 ORTHO05D003749 3.6e-35 152.1 91 72.5
Hund12292 Selenicereus undatus HOM05D003257 ORTHO05D003749 3.4e-33 145.6 82 76.8
MBI15_g33460_MAGBIO Magnolia biondii HOM05D003257 ORTHO05D003749 1.7e-32 143.3 92 76.1
BolC2t12563H Brassica oleracea HOM05D000141 ORTHO05D004489 3.7e-32 142.1 88 80.7
Cfa021656 Carpinus fangiana HOM05D003257 ORTHO05D003749 4.1e-31 138.7 159 45.9
SEGI_40039 Sequoiadendron giganteum HOM05D003257 ORTHO05D003749 6.8e-26 121.3 92 60.9
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 1.2e-25 120.6 73 76.7
SEGI_02109 Sequoiadendron giganteum HOM05D003257 ORTHO05D003749 2.4e-18 96.3 74 59.5
THA.LOC104823108 Tarenaya hassleriana HOM05D003257 ORTHO05D003749 4.0e-18 95.5 49 83.7
MD00G1145100 Malus domestica HOM05D003257 ORTHO05D003749 4.4e-17 92.0 54 81.5
Zm00001eb212100 Zea mays HOM05D003257 ORTHO05D003749 2.9e-16 89.4 52 80.8
Nitab4.5_0006595g0030 Nicotiana tabacum HOM05D003257 ORTHO05D003749 4.9e-16 88.6 54 77.8
Lj2A826G20 Lonicera japonica HOM05D003257 ORTHO05D003749 9.2e-15 84.3 101 48.5
GSVIVG01038275001 Vitis vinifera HOM05D003257 ORTHO05D003749 1.3e-13 80.5 59 61.0
HPP92_007573 Vanilla planifolia HOM05D003257 ORTHO05D003749 1.1e-07 60.8 56 57.1


User provided reference genes

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