Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G36240 Arabidopsis lyrata HOM05D006277 ORTHO05D007673 3.6e-202 708.4 456 100.0
AT5G24630 Arabidopsis thaliana HOM05D006277 ORTHO05D007673 1.1e-163 580.5 461 85.7
Carub.0006s2249 Capsella rubella HOM05D006277 ORTHO05D007673 6.5e-143 511.5 463 68.5
Sp2g22750 Schrenkiella parvula HOM05D006277 ORTHO05D007673 3.0e-140 502.7 459 67.1
Thhalv10004336m.g Eutrema salsugineum HOM05D006277 ORTHO05D007673 1.6e-133 480.3 459 66.0
BcaNung02006 Brassica carinata HOM05D006277 ORTHO05D007673 6.8e-132 474.9 458 64.2
C07p43080 Brassica napus HOM05D006277 ORTHO05D007673 5.7e-131 471.9 470 63.2
BolC7t44835H Brassica oleracea HOM05D006277 ORTHO05D007673 1.3e-130 470.7 470 63.2
A06p35430 Brassica napus HOM05D006277 ORTHO05D007673 5.7e-123 445.3 471 66.7
BraA06t26466Z Brassica rapa HOM05D006277 ORTHO05D007673 1.8e-121 440.3 481 65.5
BcaNung01248 Brassica carinata HOM05D006277 ORTHO05D007673 4.3e-118 429.1 458 60.9
CARHR188820 Cardamine hirsuta HOM05D006277 ORTHO05D007673 1.5e-115 420.6 461 60.7
Aa31LG11G3890 Aethionema arabicum HOM05D006277 ORTHO05D007673 3.7e-114 416.0 460 58.9
THA.LOC104803317 Tarenaya hassleriana HOM05D006277 ORTHO05D007673 2.4e-84 317.0 458 50.9
C09p07160 Brassica napus HOM05D000010 ORTHO05D000063 7.4e-70 268.9 438 48.6
Gohir.A08G106400 Gossypium hirsutum HOM05D006277 ORTHO05D007673 1.3e-61 241.5 462 42.0
Gorai.004G126300 Gossypium raimondii HOM05D006277 ORTHO05D007673 1.1e-60 238.4 462 41.6
Thecc.03G212000 Theobroma cacao HOM05D006277 ORTHO05D007673 8.4e-58 228.8 463 41.0
BolC9t53629H Brassica oleracea HOM05D003313 ORTHO05D004217 1.2e-56 224.9 311 51.1
Potri.012G004700 Populus trichocarpa HOM05D006277 ORTHO05D007673 3.5e-56 223.4 474 41.8
Duzib205G1288 Durio zibethinus HOM05D006277 ORTHO05D007673 1.8e-55 221.1 465 41.1
COL.COLO4_14399 Corchorus olitorius HOM05D006277 ORTHO05D007673 2.3e-55 220.7 463 40.8
Atru.chr12.2501 Acer truncatum HOM05D006277 ORTHO05D007673 1.1e-54 218.4 473 39.5
Sabra12G0000500 Salix brachista HOM05D006277 ORTHO05D007673 4.3e-54 216.5 483 40.0
EL10Ac3g05132 Beta vulgaris HOM05D006277 ORTHO05D007673 5.7e-54 216.1 463 40.4
GSVIVG01038680001 Vitis vinifera HOM05D006277 ORTHO05D007673 6.3e-53 212.6 472 38.8
Dinv29192 Davidia involucrata HOM05D006277 ORTHO05D007673 8.2e-53 212.2 466 39.3
Sabra12G0006800 Salix brachista HOM05D006277 ORTHO05D007673 1.8e-52 211.1 483 39.5
A09p06430 Brassica napus HOM05D000010 ORTHO05D000063 3.1e-52 210.3 177 71.2
vmacro06474 Vaccinium macrocarpon HOM05D006277 ORTHO05D007673 3.4e-51 206.8 507 37.9
RcHm_v2.0_Chr1g0383301 Rosa chinensis HOM05D006277 ORTHO05D007673 2.9e-50 203.8 474 39.0
MSTRG.26953 Avicennia marina HOM05D006277 ORTHO05D007673 6.5e-50 202.6 474 38.0
Prupe.2G322100 Prunus persica HOM05D006277 ORTHO05D007673 1.4e-49 201.4 187 64.2
MD01G1231400 Malus domestica HOM05D006277 ORTHO05D007673 2.5e-49 200.7 187 64.2
BraA09t36286Z Brassica rapa HOM05D000010 ORTHO05D000063 3.2e-49 200.3 205 59.5
MD07G1303400 Malus domestica HOM05D006277 ORTHO05D007673 4.2e-49 199.9 187 63.6
Rhsim03G0218400 Rhododendron simsii HOM05D006277 ORTHO05D007673 1.2e-48 198.4 483 37.5
Atru.chr12.2525 Acer truncatum HOM05D006277 ORTHO05D007673 1.6e-48 198.0 463 39.3
Manes.18G108300 Manihot esculenta HOM05D006277 ORTHO05D007673 2.1e-48 197.6 477 38.8
Sc19g0000370 Simmondsia chinensis HOM05D006277 ORTHO05D007673 2.7e-48 197.2 473 38.3
VMungo1309G1324 Vigna mungo HOM05D006277 ORTHO05D007673 3.6e-48 196.8 466 38.4
TAR626G1328 Trochodendron aralioides HOM05D006277 ORTHO05D007673 6.1e-48 196.1 184 63.0
QL09p006002 Quercus lobata HOM05D006277 ORTHO05D007673 7.9e-48 195.7 497 36.4
Ca_16838_v3 Cicer arietinum L. HOM05D006277 ORTHO05D007673 1.0e-47 195.3 466 38.0
FAN01G0327 Fragaria x ananassa HOM05D006277 ORTHO05D007673 1.4e-47 194.9 466 39.1
Hund09753 Selenicereus undatus HOM05D006277 ORTHO05D007673 1.4e-47 194.9 421 36.6
SGA_v2.0_scaffold18G08496 Striga asiatica HOM05D006277 ORTHO05D007673 1.4e-47 194.9 457 36.8
Migut.F00123 Erythranthe guttata HOM05D006277 ORTHO05D007673 3.0e-47 193.7 482 37.3
FvH4_7g33320 Fragaria vesca HOM05D006277 ORTHO05D007673 3.9e-47 193.4 468 39.7
HanXRQChr04g0117941 Helianthus annuus HOM05D006277 ORTHO05D007673 5.1e-47 193.0 187 61.5
Medtr3g093330 Medicago truncatula HOM05D006277 ORTHO05D007673 6.7e-47 192.6 469 37.1
TPR.G35912 Trifolium pratense HOM05D006277 ORTHO05D007673 6.7e-47 192.6 489 37.8
FAN10G3443 Fragaria x ananassa HOM05D006277 ORTHO05D007673 1.5e-46 191.4 466 38.6
TWI59G0797 Tripterygium wilfordii HOM05D006277 ORTHO05D007673 2.0e-46 191.0 188 61.7
Lj1g0014471 Lotus japonicus HOM05D006277 ORTHO05D007673 3.3e-46 190.3 472 37.9
Ciclev10005393m.g Citrus clementina HOM05D006277 ORTHO05D007673 4.3e-46 189.9 339 42.8
ECA238G0260 Erigeron canadensis HOM05D006277 ORTHO05D007673 5.7e-46 189.5 187 62.0
Glyma.06G139100 Glycine max HOM05D006277 ORTHO05D007673 7.4e-46 189.1 475 39.6
SalBow4G0692 Salvia bowleyana HOM05D006277 ORTHO05D007673 9.7e-46 188.7 484 36.6
Lalb_Chr23g0272041 Lupinus albus HOM05D006277 ORTHO05D007673 2.2e-45 187.6 489 38.7
CANSAT21G1902 Cannabis sativa HOM05D006277 ORTHO05D007673 2.8e-45 187.2 477 36.5
AUR62005949 Chenopodium quinoa HOM05D006277 ORTHO05D007673 1.1e-44 185.3 460 37.2
PSO384G3009 Papaver somniferum HOM05D006277 ORTHO05D007673 1.8e-44 184.5 184 60.3
PSO170G0956 Papaver somniferum HOM05D006277 ORTHO05D007673 2.4e-44 184.1 184 60.9
Phvul.009G040200 Phaseolus vulgaris HOM05D006277 ORTHO05D007673 2.4e-44 184.1 478 37.0
FAN10G1913 Fragaria x ananassa HOM05D006277 ORTHO05D007673 3.1e-44 183.7 465 37.0
Psat6g243000 Pisum sativum HOM05D006277 ORTHO05D007673 3.1e-44 183.7 472 36.0
CiPaw.06G038300 Carya illinoinensis HOM05D006277 ORTHO05D007673 4.1e-44 183.3 408 39.2
PGSC0003DMG400000548 Solanum tuberosum HOM05D006277 ORTHO05D007673 6.9e-44 182.6 473 36.6
Cpa.g.sc3.186 Carica papaya HOM05D006277 ORTHO05D007673 9.1e-44 182.2 463 37.4
Sopen03g027470 Solanum pennellii HOM05D006277 ORTHO05D007673 1.2e-43 181.8 478 36.4
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 1.5e-43 181.4 184 60.3
PSO063G0207 Papaver somniferum HOM05D006277 ORTHO05D007673 1.5e-43 181.4 184 60.3
CAN.G303.58 Capsicum annuum HOM05D006277 ORTHO05D007673 3.4e-43 180.3 462 37.4
arahy.Tifrunner.gnm1.ann1.NYS2P6 Arachis hypogaea HOM05D006277 ORTHO05D007673 4.5e-43 179.9 479 36.3
arahy.Tifrunner.gnm1.ann1.YJ5L14 Arachis hypogaea HOM05D006277 ORTHO05D007673 7.7e-43 179.1 484 37.2
arahy.Tifrunner.gnm1.ann1.VE49IY Arachis hypogaea HOM05D006277 ORTHO05D007673 1.0e-42 178.7 490 35.9
arahy.Tifrunner.gnm1.ann1.T9XRV5 Arachis hypogaea HOM05D006277 ORTHO05D007673 1.3e-42 178.3 184 60.9
Aqoxy7G02781 Aquilegia oxysepala HOM05D006277 ORTHO05D007673 2.2e-42 177.6 186 58.1
CSS0047728 Camellia sinensis var. sinensis HOM05D006277 ORTHO05D007673 2.2e-42 177.6 474 35.7
AUR62030650 Chenopodium quinoa HOM05D006277 ORTHO05D007673 2.9e-42 177.2 184 59.2
Glyma.04G225700 Glycine max HOM05D006277 ORTHO05D007673 5.0e-42 176.4 460 37.8
HPP92_017121 Vanilla planifolia HOM05D006277 ORTHO05D007673 8.5e-42 175.6 131 66.4
Nitab4.5_0007121g0020 Nicotiana tabacum HOM05D006277 ORTHO05D007673 1.1e-41 175.3 425 36.9
CDE02G3091 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 1.4e-41 174.9 185 60.0
Os02g0147700 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 1.4e-41 174.9 156 58.3
PGR142G2769 Punica granatum HOM05D006277 ORTHO05D007673 2.5e-41 174.1 464 36.0
Os02g0147100 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 9.4e-41 172.2 131 63.4
HPP92_017116 Vanilla planifolia HOM05D006277 ORTHO05D007673 9.4e-41 172.2 183 54.6
MELO3C023191.2 Cucumis melo HOM05D006277 ORTHO05D007673 2.1e-40 171.0 367 40.6
Eucgr.K00479 Eucalyptus grandis HOM05D006277 ORTHO05D007673 3.6e-40 170.2 388 38.1
Haze_00334 Corylus avellana HOM05D006277 ORTHO05D007673 4.7e-40 169.9 550 31.8
FAN03G1266 Fragaria x ananassa HOM05D006277 ORTHO05D007673 7.9e-40 169.1 386 39.1
Solyc03g079950.4 Solanum lycopersicum HOM05D006277 ORTHO05D007673 7.9e-40 169.1 473 35.9
Nitab4.5_0000021g0190 Nicotiana tabacum HOM05D006277 ORTHO05D007673 1.4e-39 168.3 394 39.1
AUR62028116 Chenopodium quinoa HOM05D006277 ORTHO05D007673 6.7e-39 166.0 467 34.7
Peaxi162Scf01026g00268 Petunia axillaris HOM05D006277 ORTHO05D007673 8.8e-39 165.6 459 35.3
Lsat_1_v5_gn_2_135460 Lactuca sativa HOM05D006277 ORTHO05D007673 1.1e-38 165.2 407 37.6
ClCG07G009750 Citrullus lanatus HOM05D006277 ORTHO05D007673 2.0e-38 164.5 463 34.1
SEGI_26440 Sequoiadendron giganteum HOM05D006277 ORTHO05D007673 2.0e-38 164.5 179 53.1
ATR0626G063 Amborella trichopoda HOM05D006277 ORTHO05D007673 2.6e-38 164.1 151 56.3
Sed0010003 Sechium edule HOM05D006277 ORTHO05D007673 5.7e-38 162.9 460 34.1
Cc02_g00600 Coffea canephora HOM05D006277 ORTHO05D007673 7.4e-38 162.5 464 35.3
CsaV3_2G019700 Cucumis sativus L. HOM05D006277 ORTHO05D007673 7.4e-38 162.5 482 34.9
LjContig00312_ERROPOS870357g0003049 Lotus japonicus HOM05D006277 ORTHO05D007673 1.3e-37 161.8 184 58.2
MBI16_g10337_MAGBIO Magnolia biondii HOM05D006277 ORTHO05D007673 1.7e-37 161.4 193 51.8
Zm00001eb232230 Zea mays HOM05D006277 ORTHO05D007673 1.5e-35 154.8 211 48.3
Gohir.D08G117800 Gossypium hirsutum HOM05D006277 ORTHO05D007673 2.6e-35 154.1 355 36.9
Cfa016128 Carpinus fangiana HOM05D006277 ORTHO05D007673 8.5e-34 149.1 370 35.4
DCAR_010558 Daucus carota HOM05D006277 ORTHO05D007673 2.3e-31 141.0 486 33.1
PSO384G0555 Papaver somniferum HOM05D006277 ORTHO05D007673 5.2e-31 139.8 159 56.6
Pp3c11_21910 Physcomitrium patens HOM05D006277 ORTHO05D007673 6.7e-31 139.4 189 46.6
Pp3c7_3940 Physcomitrium patens HOM05D006277 ORTHO05D007673 5.7e-30 136.3 185 48.6
Mapoly0143s0029 Marchantia polymorpha HOM05D006277 ORTHO05D007673 2.2e-29 134.4 193 48.2
Actinidia08720 Actinidia chinensis HOM05D006277 ORTHO05D007673 2.6e-27 127.5 357 35.9
AagrBONN_evm.TU.Sc2ySwM_362.1883 Anthoceros agrestis HOM05D006277 ORTHO05D007673 5.9e-27 126.3 189 46.6
CBR_g39579 Chara braunii HOM05D000601 ORTHO05D007673 1.4e-23 115.2 109 51.4
CBR_g24064 Chara braunii HOM05D006277 ORTHO05D007673 2.3e-23 114.4 177 42.9
Nn7g37003 Nelumbo nucifera HOM05D006277 ORTHO05D007673 3.3e-22 110.5 87 63.2
CBR_g31160 Chara braunii HOM05D006277 ORTHO05D007673 1.3e-21 108.6 128 49.2
CDE06G1557 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 1.8e-20 104.8 87 65.5
Oeu010718.2 Olea europaea HOM05D006277 ORTHO05D007673 1.8e-20 104.8 554 30.0
Potri.015G000701 Populus trichocarpa HOM05D006277 ORTHO05D007673 1.2e-19 102.1 115 54.8
arahy.Tifrunner.gnm1.ann1.Z5WHM0 Arachis hypogaea HOM05D006277 ORTHO05D007673 5.0e-18 96.7 430 30.0
CiPaw.10G123600 Carya illinoinensis HOM05D006277 ORTHO05D007673 1.2e-11 75.5 72 58.3
MCO04G384 Micromonas commoda HOM05D006277 ORTHO05D007673 4.2e-09 67.0 131 35.9
Nn5g26949 Nelumbo nucifera HOM05D006277 ORTHO05D007673 7.2e-09 66.2 40 72.5
Cre02.g105050 Chlamydomonas reinhardtii HOM05D006277 ORTHO05D007673 3.4e-06 57.4 202 28.2


User provided reference genes

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