Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 5.7e-191 671.0 405 100.0
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 6.0e-156 554.7 394 88.6
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 1.9e-154 549.7 405 87.4
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 2.5e-154 549.3 392 88.8
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 1.8e-152 543.1 405 85.2
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 4.0e-144 515.4 323 89.2
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 2.6e-143 512.7 322 88.8
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 4.4e-143 511.9 328 87.5
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 5.8e-143 511.5 323 88.5
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 3.5e-132 475.7 405 78.5
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 1.2e-119 434.1 344 86.6
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 1.5e-106 390.6 291 73.5
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 4.3e-106 389.0 335 70.1
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 7.4e-106 388.3 285 68.8
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 3.1e-104 382.9 286 69.6
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 4.1e-104 382.5 285 68.8
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 4.1e-104 382.5 332 67.8
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 5.3e-104 382.1 303 69.3
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 9.0e-104 381.3 285 68.4
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 9.0e-104 381.3 331 70.4
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 1.5e-103 380.6 312 67.6
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 1.5e-103 380.6 292 71.6
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 3.4e-103 379.4 338 69.8
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 5.9e-103 378.6 292 71.2
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 7.6e-103 378.3 303 70.0
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 1.0e-102 377.9 305 67.9
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 1.3e-102 377.5 335 66.9
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 2.2e-102 376.7 302 68.5
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 2.9e-102 376.3 292 70.2
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 3.8e-102 375.9 298 69.5
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 5.0e-102 375.6 291 69.1
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 1.9e-101 373.6 302 68.5
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 2.5e-101 373.2 305 64.9
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 2.5e-101 373.2 311 66.9
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 4.2e-101 372.5 294 68.4
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 4.2e-101 372.5 302 67.9
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 9.4e-101 371.3 331 64.4
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 9.4e-101 371.3 304 67.8
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.2e-100 370.9 303 68.0
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 2.7e-100 369.8 312 64.4
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 2.7e-100 369.8 295 65.8
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 6.1e-100 368.6 336 64.6
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 6.1e-100 368.6 303 67.7
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 2.3e-99 366.7 294 66.3
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 8.8e-99 364.8 339 59.0
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 8.8e-99 364.8 300 76.3
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 1.5e-98 364.0 285 75.1
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 2.8e-97 359.8 324 67.0
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 4.8e-97 359.0 297 65.3
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 8.2e-97 358.2 301 65.8
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 8.2e-97 358.2 283 67.5
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 2.4e-96 356.7 294 65.6
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 5.3e-96 355.5 304 65.1
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 6.9e-96 355.1 297 62.6
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 2.6e-95 353.2 311 72.7
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 3.4e-95 352.8 334 61.4
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 7.7e-95 351.7 334 62.3
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 7.7e-95 351.7 327 60.9
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 1.3e-94 350.9 269 72.1
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 1.7e-94 350.5 287 78.0
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 2.2e-94 350.1 292 65.4
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 2.9e-94 349.7 302 64.6
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 2.9e-94 349.7 293 65.2
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 3.8e-94 349.4 254 73.6
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.9e-93 347.1 305 61.3
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 1.6e-92 344.0 263 76.8
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 2.7e-92 343.2 324 58.3
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 1.4e-91 340.9 232 75.4
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 3.0e-91 339.7 294 70.1
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 4.4e-90 335.9 235 74.9
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 7.4e-90 335.1 246 73.2
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 6.5e-86 322.0 274 66.4
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 7.2e-85 318.5 260 68.1
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 4.7e-84 315.8 244 70.5
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 2.0e-82 310.5 343 58.0
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 1.7e-81 307.4 235 66.8
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 1.1e-80 304.7 222 70.7
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 2.0e-74 283.9 212 70.3
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 5.2e-67 259.2 155 79.4
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 2.7e-63 246.9 165 75.2
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 4.2e-61 239.6 194 68.6
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 5.5e-61 239.2 207 66.7
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 4.1e-56 223.0 197 67.0
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 4.5e-55 219.5 244 52.9
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 2.9e-54 216.9 242 52.9
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 1.9e-53 214.2 168 72.0
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 1.6e-52 211.1 194 63.9
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 2.2e-49 200.7 201 61.2
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 1.5e-42 177.9 237 48.5
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 7.5e-42 175.6 230 48.7
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 4.6e-39 166.4 236 39.4
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 3.2e-32 143.7 115 77.4
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 1.0e-30 138.7 155 46.5
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.4e-24 118.2 73 87.7


User provided reference genes

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