Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 1.7e-205 719.2 380 100.0
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 1.7e-189 666.0 389 92.8
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 1.9e-188 662.5 390 91.8
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 1.0e-181 640.2 389 87.7
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 4.3e-180 634.8 387 87.3
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 8.3e-176 620.5 383 86.4
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 1.2e-174 616.7 383 86.2
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 9.5e-172 607.1 386 83.9
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 9.5e-172 607.1 386 83.9
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 3.4e-169 598.6 384 84.4
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 4.4e-169 598.2 402 81.1
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 4.0e-162 575.1 393 81.7
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 2.9e-160 568.9 385 78.7
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 1.9e-156 556.2 391 80.6
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 3.6e-155 552.0 391 79.8
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 6.9e-146 521.2 309 91.9
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 1.5e-140 503.4 392 74.2
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 2.0e-129 466.5 384 68.0
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 1.2e-126 457.2 384 66.7
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 1.6e-126 456.8 380 67.4
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 2.7e-126 456.1 381 66.7
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 4.6e-126 455.3 382 67.0
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 7.9e-126 454.5 383 67.6
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 7.9e-126 454.5 382 67.0
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 1.8e-125 453.4 338 73.1
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 3.9e-125 452.2 382 66.5
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 6.7e-125 451.4 385 67.8
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 1.3e-123 447.2 379 68.1
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 2.1e-123 446.4 381 66.1
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 6.2e-123 444.9 378 66.4
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 1.8e-122 443.4 388 64.7
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 1.8e-122 443.4 388 66.5
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 1.2e-121 440.7 332 71.7
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 1.2e-121 440.7 376 65.4
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 1.5e-121 440.3 385 66.2
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 2.0e-121 439.9 381 64.3
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 3.4e-121 439.1 381 65.1
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.4e-121 439.1 381 65.1
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 4.5e-121 438.7 342 69.9
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 5.8e-121 438.3 389 64.5
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 7.6e-121 438.0 374 66.8
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 3.8e-120 435.6 385 62.3
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 6.5e-120 434.9 381 64.8
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 6.5e-120 434.9 322 73.0
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 3.2e-119 432.6 395 63.8
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.2e-119 432.6 381 64.6
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 7.1e-119 431.4 383 64.8
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 1.2e-118 430.6 372 66.4
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 2.7e-118 429.5 349 68.2
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 2.7e-118 429.5 384 62.5
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 3.5e-118 429.1 377 65.0
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 3.5e-118 429.1 382 63.1
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 4.6e-118 428.7 381 63.5
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 6.0e-118 428.3 383 64.2
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 7.9e-118 427.9 320 71.2
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 5.1e-117 425.2 306 74.8
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 6.7e-117 424.9 274 80.7
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 1.1e-116 424.1 376 64.4
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 3.3e-116 422.5 376 64.4
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 9.7e-116 421.0 377 64.7
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 9.7e-116 421.0 381 63.5
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 3.7e-115 419.1 387 62.3
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 1.1e-114 417.5 328 69.5
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 1.4e-114 417.2 382 62.6
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 1.8e-114 416.8 327 69.4
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 2.4e-114 416.4 378 63.5
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 2.4e-114 416.4 281 77.6
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.0e-113 413.3 290 76.2
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 2.9e-112 409.5 338 67.2
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 2.9e-112 409.5 386 60.9
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 5.0e-112 408.7 402 61.2
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 5.0e-112 408.7 356 64.0
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 8.5e-112 407.9 326 68.4
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 8.5e-112 407.9 321 67.6
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 8.5e-112 407.9 370 62.7
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 2.5e-111 406.4 339 66.1
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.2e-110 404.1 258 80.2
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 7.9e-110 401.4 315 69.2
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 9.7e-108 394.4 331 69.2
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 4.8e-107 392.1 387 59.9
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 9.1e-106 387.9 351 61.5
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 1.2e-105 387.5 322 66.1
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 2.5e-103 379.8 320 66.6
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 2.1e-102 376.7 316 64.2
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 2.7e-102 376.3 320 63.4
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 7.4e-100 368.2 329 60.8
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 6.3e-99 365.2 327 60.9
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 3.1e-98 362.8 236 80.1
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 5.3e-98 362.1 320 63.4
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 1.2e-97 360.9 269 71.4
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 2.0e-97 360.1 337 61.1
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 6.5e-96 355.1 271 67.9
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 8.5e-96 354.8 294 66.7
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 5.5e-95 352.1 497 47.1
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 1.6e-94 350.5 328 61.9
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 2.7e-94 349.7 363 57.0
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 3.6e-94 349.4 502 46.2
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 1.8e-93 347.1 294 62.9
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 1.1e-92 344.4 272 64.0
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 4.8e-91 339.0 324 60.8
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 5.3e-90 335.5 364 56.6
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 2.5e-87 326.6 205 81.5
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 4.0e-85 319.3 210 77.1
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 2.6e-84 316.6 259 66.8
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 3.6e-78 296.2 419 48.4
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 4.0e-77 292.7 313 57.8
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 9.8e-76 288.1 176 85.8
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 6.3e-75 285.4 263 60.8
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 1.4e-74 284.3 388 48.5
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 1.4e-74 284.3 263 57.8
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 1.4e-74 284.3 263 57.8
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 5.0e-72 275.8 264 56.8
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 9.8e-68 261.5 188 70.7
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 2.2e-67 260.4 263 57.4
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 1.5e-63 247.7 268 53.0
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 1.2e-62 244.6 157 78.3
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 5.2e-61 239.2 294 46.6
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.8e-53 214.2 129 84.5
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 1.7e-51 207.6 130 80.0
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 5.4e-50 202.6 138 75.4
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 3.1e-45 186.8 114 88.6
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 8.6e-40 168.7 251 39.4
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.1e-39 168.3 105 79.0
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 4.2e-26 123.2 187 38.0
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 2.7e-25 120.6 180 40.6
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 3.3e-23 113.6 82 73.2
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 1.1e-21 108.6 90 66.7
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 2.0e-12 77.8 48 87.5
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 4.9e-11 73.2 38 92.1
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 8.4e-11 72.4 249 25.7
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.6e-09 68.2 153 35.9
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 3.9e-08 63.5 36 86.1
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 6.7e-08 62.8 55 56.4


User provided reference genes

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