Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 9.1e-173 610.1 308 100.0
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 2.2e-163 578.9 303 95.7
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 7.0e-157 557.4 307 91.9
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 6.1e-153 544.3 299 91.3
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 2.4e-149 532.3 298 90.9
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 4.5e-148 528.1 299 91.0
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 1.9e-138 496.1 299 84.6
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 3.6e-137 491.9 304 86.2
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 6.4e-134 481.1 303 84.5
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 6.4e-134 481.1 303 84.5
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 8.3e-134 480.7 303 84.2
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 3.5e-132 475.3 304 84.2
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 3.5e-132 475.3 304 84.2
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 9.5e-122 440.7 299 77.3
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 7.3e-106 387.9 302 66.6
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 2.6e-103 379.4 303 67.0
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 7.6e-103 377.9 259 72.2
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.7e-102 376.7 251 72.9
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 1.7e-102 376.7 257 71.6
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 4.9e-102 375.2 311 63.3
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 6.4e-102 374.8 304 65.5
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 8.4e-102 374.4 249 74.3
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 5.4e-101 371.7 301 66.4
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 5.4e-101 371.7 292 64.4
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 9.3e-101 370.9 304 65.1
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 1.2e-100 370.5 305 63.3
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 1.2e-100 370.5 264 70.1
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 1.6e-100 370.2 305 63.6
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 1.6e-100 370.2 304 64.8
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.3e-99 367.1 304 62.8
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 3.9e-99 365.5 279 65.9
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 3.9e-99 365.5 279 65.9
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 6.7e-99 364.8 289 65.1
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 1.1e-98 364.0 300 63.3
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 1.9e-98 363.2 253 71.9
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 2.5e-98 362.8 300 62.3
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 2.5e-98 362.8 290 65.2
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 3.3e-98 362.5 212 81.1
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 7.4e-98 361.3 294 64.6
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 9.6e-98 360.9 301 63.1
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 1.3e-97 360.5 246 71.5
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 1.3e-97 360.5 288 64.6
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 1.3e-97 360.5 281 65.1
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 2.8e-97 359.4 308 61.4
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 1.1e-96 357.5 285 63.2
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 1.8e-96 356.7 253 70.0
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 3.1e-96 355.9 270 67.8
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 4.0e-96 355.5 307 62.2
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 4.0e-96 355.5 264 67.4
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 5.3e-96 355.1 264 65.5
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 6.9e-96 354.8 292 63.4
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 2.0e-95 353.2 311 62.4
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 5.8e-95 351.7 291 61.5
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 9.9e-95 350.9 292 61.6
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 2.9e-94 349.4 251 66.9
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 2.9e-94 349.4 301 59.8
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 8.4e-94 347.8 215 77.7
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 3.2e-93 345.9 253 66.0
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 9.3e-93 344.4 251 65.7
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 2.7e-92 342.8 249 65.9
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 2.7e-92 342.8 256 65.6
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 3.5e-92 342.4 297 61.3
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 4.6e-92 342.0 302 60.6
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 2.3e-91 339.7 291 60.8
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 2.3e-91 339.7 304 58.9
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 3.9e-91 339.0 291 60.5
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 1.9e-90 336.7 295 58.6
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 2.5e-90 336.3 248 65.7
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 3.3e-90 335.9 295 59.3
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 9.6e-90 334.3 291 59.5
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 1.6e-89 333.6 289 59.5
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 1.6e-89 333.6 289 59.5
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 2.1e-89 333.2 247 64.0
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 6.2e-89 331.6 269 62.5
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 8.2e-89 331.3 257 65.0
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 1.8e-88 330.1 299 57.9
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 5.3e-88 328.6 311 57.9
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 2.0e-87 326.6 318 56.9
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 2.0e-87 326.6 258 64.7
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 4.5e-87 325.5 240 66.2
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 4.5e-87 325.5 318 56.6
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 1.7e-86 323.6 245 64.9
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 5.1e-83 312.0 310 56.5
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.1e-82 310.8 229 68.1
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 2.5e-82 309.7 284 58.8
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 9.7e-82 307.8 302 55.0
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 6.9e-80 301.6 321 53.0
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 8.5e-78 294.7 225 66.2
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 2.1e-76 290.0 253 60.9
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 2.7e-76 289.7 279 56.3
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 1.5e-74 283.9 223 64.1
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 9.7e-74 281.2 218 65.1
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 1.2e-71 274.2 182 72.5
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 5.0e-70 268.9 205 65.9
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 6.1e-68 261.9 158 80.4
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 6.1e-68 261.9 314 48.4
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 8.8e-67 258.1 288 52.8
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 2.0e-66 256.9 256 52.7
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 1.3e-65 254.2 214 64.5
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 4.1e-64 249.2 219 58.9
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 4.1e-64 249.2 219 58.9
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 1.0e-62 244.6 322 45.7
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.2e-60 237.7 167 68.3
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 3.8e-54 216.1 175 61.1
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 5.2e-43 179.1 130 68.5
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.5e-42 177.6 101 76.2
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 3.1e-40 169.9 271 37.3
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 2.4e-32 143.7 107 60.7
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 4.7e-28 129.4 192 38.0
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 2.6e-10 70.5 101 39.6
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 3.2e-08 63.5 49 63.3
AUR62039657 Chenopodium quinoa HOM05D002933 ORTHO05D007742 8.6e-06 55.5 278 22.3


User provided reference genes

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