Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 0.0e+00 1140.9 590 100.0
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 2.0e-293 1011.9 590 90.2
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 1.5e-277 959.1 588 84.5
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 7.6e-261 903.7 588 81.3
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 6.7e-241 837.4 612 74.0
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 5.5e-235 817.8 485 86.0
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 2.7e-221 772.3 603 70.3
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 3.5e-221 771.9 604 70.5
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 3.4e-216 755.4 604 69.4
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 1.0e-209 733.8 594 68.7
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 7.5e-208 727.6 604 67.5
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 4.3e-203 711.8 603 66.3
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 5.6e-203 711.4 590 65.4
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 3.4e-152 542.7 599 50.1
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 3.4e-144 516.2 608 48.5
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 1.7e-143 513.8 594 48.3
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 2.2e-143 513.5 601 46.8
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 6.5e-143 511.9 605 48.4
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 8.4e-143 511.5 594 48.5
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 1.9e-142 510.4 599 47.7
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 4.6e-141 505.8 599 48.7
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 6.7e-140 501.9 608 47.5
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 2.8e-138 496.5 600 47.7
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 3.7e-138 496.1 610 47.5
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 2.4e-137 493.4 599 45.9
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 2.6e-136 490.0 596 47.0
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 5.0e-135 485.7 664 44.4
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 1.1e-134 484.6 604 46.2
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 2.7e-133 479.9 600 46.7
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 3.6e-133 479.6 597 46.4
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 3.6e-133 479.6 599 45.6
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 3.0e-132 476.5 583 46.0
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 3.0e-132 476.5 578 48.4
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 3.9e-132 476.1 601 45.3
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 6.7e-132 475.3 586 46.1
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 8.7e-132 474.9 615 44.1
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 3.3e-131 473.0 598 46.3
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 4.3e-131 472.6 590 45.8
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 7.4e-131 471.9 601 45.3
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 9.7e-131 471.5 624 44.2
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 2.2e-130 470.3 624 44.2
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.7e-130 469.5 605 45.6
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 8.2e-130 468.4 602 45.8
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 8.2e-130 468.4 583 46.7
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 2.4e-129 466.8 572 47.2
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.1e-129 466.5 605 44.8
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 3.1e-129 466.5 593 45.7
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.2e-128 464.5 600 43.8
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 1.5e-128 464.2 653 43.0
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 3.4e-128 463.0 624 43.6
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 1.3e-127 461.1 594 43.9
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 8.5e-127 458.4 648 43.7
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 1.1e-126 458.0 607 44.5
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 1.9e-126 457.2 598 44.6
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 3.2e-126 456.4 601 44.9
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 1.2e-125 454.5 588 44.2
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 1.6e-125 454.1 594 44.4
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 3.9e-124 449.5 584 46.2
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 4.4e-123 446.0 532 47.0
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 4.8e-122 442.6 596 43.6
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 2.4e-121 440.3 606 43.7
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 4.5e-120 436.0 611 43.0
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 5.0e-119 432.6 652 39.4
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 2.1e-117 427.2 605 40.7
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 2.7e-117 426.8 571 44.5
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 3.6e-117 426.4 601 42.8
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 4.7e-117 426.0 604 40.9
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 3.9e-116 422.9 598 42.6
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 6.7e-116 422.2 602 42.2
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 2.6e-115 420.2 632 39.9
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 3.3e-115 419.9 624 41.5
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 1.1e-113 414.8 599 41.2
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 2.4e-113 413.7 604 44.2
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 2.0e-112 410.6 525 44.2
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 5.9e-112 409.1 598 42.1
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 5.9e-112 409.1 597 42.5
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 5.0e-111 406.0 568 42.4
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 1.4e-108 397.9 607 38.7
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 5.7e-107 392.5 493 45.4
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 2.4e-105 387.1 513 43.5
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 5.2e-100 369.4 523 40.7
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 1.2e-99 368.2 638 38.2
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 3.1e-97 360.1 607 37.1
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 2.0e-96 357.5 484 44.4
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 4.2e-94 349.7 600 37.3
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.0e-92 345.1 410 44.9
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 1.1e-89 335.1 409 45.2
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 1.8e-84 317.8 577 36.6
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 8.9e-84 315.5 384 46.9
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 4.1e-81 306.6 383 42.8
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.4e-81 306.2 385 46.2
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.0e-79 299.7 385 45.5
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.6e-77 294.7 621 34.5
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 7.5e-75 285.8 639 33.5
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 3.6e-69 266.9 452 37.4
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 6.8e-68 262.7 372 43.0
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 1.4e-65 255.0 581 32.7
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 3.1e-60 237.3 566 32.2
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 8.4e-58 229.2 340 42.6
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 3.9e-55 220.3 307 41.0
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 5.4e-49 199.9 267 46.4
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 6.6e-47 193.0 459 31.6
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 3.0e-39 167.5 259 39.4
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.7e-34 151.8 528 27.1
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 1.9e-33 148.3 226 39.4
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 7.1e-33 146.4 160 48.8
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 3.3e-30 137.5 569 25.0
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 9.6e-30 136.0 555 27.6
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 3.7e-29 134.0 651 24.3
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 1.4e-28 132.1 630 24.0
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 5.8e-27 126.7 141 48.2
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 1.4e-17 95.5 166 39.8
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.6e-16 92.0 96 53.1
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 4.6e-16 90.5 127 43.3
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 7.7e-11 73.2 96 43.8
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 3.3e-06 57.8 259 24.7


User provided reference genes

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