Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 2.0e-149 532.3 261 100.0
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 4.0e-137 491.5 261 92.0
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 1.1e-131 473.4 261 90.0
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 3.3e-131 471.9 267 90.3
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 2.1e-122 442.6 266 85.3
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 2.1e-122 442.6 266 85.3
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 1.5e-120 436.4 270 85.2
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 1.6e-117 426.4 261 86.2
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 6.6e-116 421.0 239 87.4
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 2.8e-114 415.6 253 85.8
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 6.2e-114 414.5 255 85.1
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 8.1e-114 414.1 253 85.4
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 7.3e-107 391.0 263 74.9
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 1.1e-99 367.1 269 69.5
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 2.5e-99 365.9 266 69.2
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 3.4e-96 355.5 265 66.0
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 4.5e-96 355.1 265 66.4
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 7.6e-96 354.4 252 71.0
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 4.2e-94 348.6 266 66.5
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 7.1e-94 347.8 262 66.8
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 1.2e-93 347.1 263 66.9
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 3.5e-93 345.5 267 66.3
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 1.0e-92 344.0 207 75.8
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 1.8e-92 343.2 258 66.3
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 3.0e-92 342.4 258 66.7
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 3.9e-92 342.0 256 68.0
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 5.1e-92 341.7 265 65.7
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 8.7e-92 340.9 242 69.8
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 8.7e-92 340.9 237 69.2
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 1.9e-91 339.7 259 66.4
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 4.3e-91 338.6 269 62.1
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 9.6e-91 337.4 208 76.0
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 9.6e-91 337.4 267 64.4
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 9.6e-91 337.4 221 71.9
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 1.3e-90 337.0 248 67.7
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 1.3e-90 337.0 258 66.7
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.1e-90 336.3 200 76.0
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.1e-90 336.3 200 76.0
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 2.1e-90 336.3 237 68.4
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 2.8e-90 335.9 255 65.9
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 6.3e-90 334.7 243 67.1
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 6.3e-90 334.7 236 69.5
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 1.4e-89 333.6 257 66.1
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 1.8e-89 333.2 257 65.4
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 3.1e-89 332.4 245 65.7
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 4.1e-89 332.0 264 64.4
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 6.9e-89 331.3 271 65.3
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 4.5e-88 328.6 255 66.7
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 1.0e-87 327.4 206 85.0
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 4.2e-86 322.0 240 67.5
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 4.2e-86 322.0 265 62.6
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 5.5e-86 321.6 237 67.5
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 7.2e-86 321.2 264 62.9
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 9.3e-86 320.9 264 62.5
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 9.3e-86 320.9 261 61.3
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 1.2e-85 320.5 273 63.0
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 2.7e-85 319.3 207 69.6
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 3.5e-85 318.9 248 64.9
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 3.5e-85 318.9 246 66.3
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 7.9e-85 317.8 215 68.8
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 1.0e-84 317.4 241 66.0
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 1.8e-84 316.6 256 64.1
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 2.3e-84 316.2 241 66.0
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 8.7e-84 314.3 205 72.2
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 1.9e-83 313.2 267 60.7
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 7.4e-83 311.2 264 61.4
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 9.7e-83 310.8 265 62.3
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 9.7e-83 310.8 265 62.3
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 2.2e-82 309.7 186 77.4
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 2.2e-82 309.7 231 66.2
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 1.8e-81 306.6 252 62.7
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 4.1e-81 305.4 188 75.5
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 9.0e-81 304.3 259 61.0
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 3.8e-79 298.9 197 72.1
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 4.2e-78 295.4 197 68.5
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 9.4e-78 294.3 229 63.8
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 1.6e-77 293.5 215 67.9
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 3.9e-76 288.9 234 61.5
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 1.1e-75 287.3 175 74.3
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 3.3e-75 285.8 299 54.2
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 4.8e-74 282.0 176 73.9
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 8.2e-74 281.2 227 60.4
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 1.3e-71 273.9 174 73.6
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 5.0e-71 271.9 342 46.5
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 1.5e-67 260.4 272 52.9
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 7.4e-67 258.1 209 62.2
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 1.4e-65 253.8 216 57.4
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 1.4e-65 253.8 199 59.3
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 1.0e-63 247.7 154 72.7
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 2.2e-63 246.5 176 67.6
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 4.0e-60 235.7 199 56.8
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 3.3e-59 232.6 159 67.3
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 2.7e-56 223.0 129 76.7
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 4.5e-56 222.2 134 73.1
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 1.3e-55 220.7 157 64.3
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 6.5e-55 218.4 237 51.1
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 8.5e-55 218.0 165 59.4
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 9.4e-54 214.5 157 65.0
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.7e-50 202.6 172 61.0
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 5.4e-49 198.7 173 60.1
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 1.0e-47 194.5 107 86.0
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 1.0e-47 194.5 107 86.0
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 1.3e-47 194.1 195 53.8
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 4.2e-46 189.1 161 60.2
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 1.4e-44 184.1 110 79.1
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 2.3e-44 183.3 113 74.3
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 3.0e-44 183.0 111 76.6
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 2.0e-43 180.3 182 56.6
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 1.7e-42 177.2 106 82.1
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 2.2e-42 176.8 165 55.8
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 8.6e-39 164.9 174 47.1
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 3.0e-36 156.4 139 56.8
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 4.0e-36 156.0 93 77.4
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 2.0e-35 153.7 153 58.8
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 3.7e-34 149.4 81 80.2
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 2.4e-33 146.7 93 68.8
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 7.0e-33 145.2 82 76.8
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 1.7e-31 140.6 120 62.5
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 8.1e-21 105.1 61 78.7
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 1.8e-20 104.0 178 37.6


User provided reference genes

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