Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G45780 Arabidopsis lyrata HOM05D004491 ORTHO05D006742 1.7e-235 818.9 414 100.0
AT3G63000 Arabidopsis thaliana HOM05D004491 ORTHO05D006742 4.6e-228 794.3 412 96.6
Carub.0005s2965 Capsella rubella HOM05D004491 ORTHO05D006742 2.8e-225 785.0 412 95.1
CARHR173290 Cardamine hirsuta HOM05D004491 ORTHO05D006742 1.1e-224 783.1 412 94.4
Sp5g00520 Schrenkiella parvula HOM05D004491 ORTHO05D006742 5.8e-223 777.3 412 93.7
BcaB02g08082 Brassica carinata HOM05D004491 ORTHO05D006742 8.1e-217 756.9 414 90.3
C04p30230 Brassica napus HOM05D004491 ORTHO05D006742 1.1e-216 756.5 414 90.3
BolC4t24555H Brassica oleracea HOM05D004491 ORTHO05D006742 1.1e-216 756.5 414 90.3
BcaC02g10333 Brassica carinata HOM05D004491 ORTHO05D006742 1.2e-215 753.1 414 90.1
A04p00390 Brassica napus HOM05D004491 ORTHO05D006742 4.4e-215 751.1 414 90.3
BraA04t15757Z Brassica rapa HOM05D004491 ORTHO05D006742 1.3e-214 749.6 414 90.1
Aa31LG10G16820 Aethionema arabicum HOM05D004491 ORTHO05D006742 3.0e-211 738.4 413 88.6
Thhalv10001466m.g Eutrema salsugineum HOM05D004491 ORTHO05D006742 9.0e-208 726.9 414 86.5
Aa31LG1G29390 Aethionema arabicum HOM05D004491 ORTHO05D006742 8.4e-206 720.3 414 85.0
Sp4g29890 Schrenkiella parvula HOM05D004491 ORTHO05D006742 2.5e-202 708.8 413 85.0
AT2G47970 Arabidopsis thaliana HOM05D004491 ORTHO05D006742 4.0e-200 701.4 414 84.5
AL4G47560 Arabidopsis lyrata HOM05D004491 ORTHO05D006742 1.6e-196 689.5 412 83.3
THA.LOC104817536 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 2.1e-196 689.1 412 82.8
Cpa.g.sc9.150 Carica papaya HOM05D004491 ORTHO05D006742 7.1e-189 664.1 410 79.8
Potri.014G135590 Populus trichocarpa HOM05D004491 ORTHO05D006742 6.0e-188 661.0 410 79.5
Manes.05G069700 Manihot esculenta HOM05D004491 ORTHO05D006742 3.1e-184 648.7 410 79.3
Sabra14G0101900 Salix brachista HOM05D004491 ORTHO05D006742 2.6e-183 645.6 410 77.8
Potri.002G213600 Populus trichocarpa HOM05D004491 ORTHO05D006742 5.8e-183 644.4 412 76.9
Sabra02G0149400 Salix brachista HOM05D004491 ORTHO05D006742 5.8e-183 644.4 412 77.4
TWI23G1267 Tripterygium wilfordii HOM05D004491 ORTHO05D006742 1.7e-182 642.9 409 77.0
Gorai.004G139800 Gossypium raimondii HOM05D004491 ORTHO05D006742 2.5e-181 639.0 410 76.8
Gohir.A08G115800 Gossypium hirsutum HOM05D004491 ORTHO05D006742 5.5e-181 637.9 410 76.3
CANSAT25G3440 Cannabis sativa HOM05D004491 ORTHO05D006742 7.2e-181 637.5 411 75.9
CsaV3_5G000130 Cucumis sativus L. HOM05D004491 ORTHO05D006742 9.3e-181 637.1 412 75.0
Gohir.D08G136600 Gossypium hirsutum HOM05D004491 ORTHO05D006742 9.3e-181 637.1 410 76.6
TWI14G1187 Tripterygium wilfordii HOM05D004491 ORTHO05D006742 1.2e-180 636.7 410 76.1
MELO3C005918.2 Cucumis melo HOM05D004491 ORTHO05D006742 2.1e-180 636.0 412 74.5
Thecc.01G288700 Theobroma cacao HOM05D004491 ORTHO05D006742 2.1e-180 636.0 410 76.3
ClCG01G000050 Citrullus lanatus HOM05D004491 ORTHO05D006742 6.1e-180 634.4 412 74.3
Duzib211G0578 Durio zibethinus HOM05D004491 ORTHO05D006742 6.7e-179 630.9 410 75.6
RcHm_v2.0_Chr6g0292401 Rosa chinensis HOM05D004491 ORTHO05D006742 6.7e-179 630.9 410 75.1
Cfa006054 Carpinus fangiana HOM05D004491 ORTHO05D006742 1.5e-178 629.8 408 75.5
Haze_04798 Corylus avellana HOM05D004491 ORTHO05D006742 5.7e-178 627.9 408 75.5
Lalb_Chr20g0111001 Lupinus albus HOM05D004491 ORTHO05D006742 2.2e-177 625.9 416 74.8
Hma1.2p1_0209F.1_g089210 Hydrangea macrophylla HOM05D004491 ORTHO05D006742 3.7e-177 625.2 409 73.8
PGSC0003DMG400024040 Solanum tuberosum HOM05D004491 ORTHO05D006742 6.3e-177 624.4 409 74.6
Actinidia24287 Actinidia chinensis HOM05D004491 ORTHO05D006742 8.2e-177 624.0 409 73.3
MD03G1274300 Malus domestica HOM05D004491 ORTHO05D006742 8.2e-177 624.0 413 73.6
CiPaw.07G098600 Carya illinoinensis HOM05D004491 ORTHO05D006742 1.4e-176 623.2 409 73.8
MSTRG.27268 Avicennia marina HOM05D004491 ORTHO05D006742 1.8e-176 622.9 412 73.5
FvH4_2g24580 Fragaria vesca HOM05D004491 ORTHO05D006742 1.8e-176 622.9 409 74.3
Gohir.A12G007800 Gossypium hirsutum HOM05D004491 ORTHO05D006742 1.8e-176 622.9 412 73.3
FAN15G2832 Fragaria x ananassa HOM05D004491 ORTHO05D006742 2.4e-176 622.5 409 74.3
FAN27G1423 Fragaria x ananassa HOM05D004491 ORTHO05D006742 3.1e-176 622.1 409 74.1
FAN24G0196 Fragaria x ananassa HOM05D004491 ORTHO05D006742 5.3e-176 621.3 409 74.3
Gorai.008G007400 Gossypium raimondii HOM05D004491 ORTHO05D006742 5.3e-176 621.3 412 73.3
Atru.chr5.1296 Acer truncatum HOM05D004491 ORTHO05D006742 9.0e-176 620.5 412 74.3
FAN20G1381 Fragaria x ananassa HOM05D004491 ORTHO05D006742 9.0e-176 620.5 409 73.8
Nitab4.5_0003831g0010 Nicotiana tabacum HOM05D004491 ORTHO05D006742 9.0e-176 620.5 411 73.2
Sed0015582 Sechium edule HOM05D004491 ORTHO05D006742 9.0e-176 620.5 412 73.5
PSO170G1317 Papaver somniferum HOM05D004491 ORTHO05D006742 1.2e-175 620.2 412 73.3
CSS0018382 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 2.0e-175 619.4 409 73.8
Phvul.001G201100 Phaseolus vulgaris HOM05D004491 ORTHO05D006742 3.4e-175 618.6 413 74.3
VMungo1383G0326 Vigna mungo HOM05D004491 ORTHO05D006742 4.5e-175 618.2 413 73.8
Gohir.D12G007200 Gossypium hirsutum HOM05D004491 ORTHO05D006742 7.7e-175 617.5 412 72.8
Lalb_Chr25g0287571 Lupinus albus HOM05D004491 ORTHO05D006742 7.7e-175 617.5 415 72.8
Ciclev10011862m.g Citrus clementina HOM05D004491 ORTHO05D006742 1.0e-174 617.1 410 73.2
QL12p023667 Quercus lobata HOM05D004491 ORTHO05D006742 1.0e-174 617.1 412 72.3
Sed0005784 Sechium edule HOM05D004491 ORTHO05D006742 1.0e-174 617.1 412 72.6
Prupe.8G251000 Prunus persica HOM05D004491 ORTHO05D006742 2.2e-174 615.9 410 73.7
Glyma.03G207900 Glycine max HOM05D004491 ORTHO05D006742 6.5e-174 614.4 414 73.9
Sopen06g035830 Solanum pennellii HOM05D004491 ORTHO05D006742 6.5e-174 614.4 409 72.9
PSO407G0423 Papaver somniferum HOM05D004491 ORTHO05D006742 8.5e-174 614.0 412 72.8
MD11G1296800 Malus domestica HOM05D004491 ORTHO05D006742 1.1e-173 613.6 411 72.7
Nitab4.5_0002093g0130 Nicotiana tabacum HOM05D004491 ORTHO05D006742 1.1e-173 613.6 411 72.5
Solyc06g084440.3 Solanum lycopersicum HOM05D004491 ORTHO05D006742 1.1e-173 613.6 409 72.9
arahy.Tifrunner.gnm1.ann1.16527J Arachis hypogaea HOM05D004491 ORTHO05D006742 1.9e-173 612.8 415 73.3
Medtr7g107480 Medicago truncatula HOM05D004491 ORTHO05D006742 1.9e-173 612.8 414 73.2
Glyma.19G205200 Glycine max HOM05D004491 ORTHO05D006742 2.5e-173 612.5 414 73.9
Aqoxy5G00601 Aquilegia oxysepala HOM05D004491 ORTHO05D006742 7.2e-173 610.9 411 72.0
arahy.Tifrunner.gnm1.ann1.5A22SW Arachis hypogaea HOM05D004491 ORTHO05D006742 9.4e-173 610.5 415 72.8
Ca_09104_v3 Cicer arietinum L. HOM05D004491 ORTHO05D006742 1.2e-172 610.1 414 73.4
DCAR_012436 Daucus carota HOM05D004491 ORTHO05D006742 1.2e-172 610.1 410 73.7
TAR636G1438 Trochodendron aralioides HOM05D004491 ORTHO05D006742 1.6e-172 609.8 409 72.9
Lj1g0004162 Lotus japonicus HOM05D004491 ORTHO05D006742 2.1e-172 609.4 414 72.7
Cc01_g20110 Coffea canephora HOM05D004491 ORTHO05D006742 3.6e-172 608.6 409 71.4
ATR0706G070 Amborella trichopoda HOM05D004491 ORTHO05D006742 1.4e-171 606.7 411 72.5
Peaxi162Scf01039g00225 Petunia axillaris HOM05D004491 ORTHO05D006742 1.4e-171 606.7 410 73.2
Nn3g21241 Nelumbo nucifera HOM05D004491 ORTHO05D006742 2.3e-171 605.9 415 72.8
Psat3g025480 Pisum sativum HOM05D004491 ORTHO05D006742 8.8e-171 604.0 414 72.0
Eucgr.K03426 Eucalyptus grandis HOM05D004491 ORTHO05D006742 5.7e-170 601.3 410 71.2
vmacro09158 Vaccinium macrocarpon HOM05D004491 ORTHO05D006742 5.7e-170 601.3 413 70.9
Lsat_1_v5_gn_5_189841 Lactuca sativa HOM05D004491 ORTHO05D006742 9.7e-170 600.5 407 70.0
SalBow3G0026 Salvia bowleyana HOM05D004491 ORTHO05D006742 9.7e-170 600.5 409 71.1
SGA_v2.0_scaffold44G16642 Striga asiatica HOM05D004491 ORTHO05D006742 2.8e-169 599.0 410 72.0
Hund18024 Selenicereus undatus HOM05D004491 ORTHO05D006742 8.2e-169 597.4 416 70.4
PGR044G0382 Punica granatum HOM05D004491 ORTHO05D006742 1.8e-168 596.3 411 71.0
Migut.F00598 Erythranthe guttata HOM05D004491 ORTHO05D006742 3.1e-168 595.5 409 70.9
Ah.02g115120 Amaranthus hybridus HOM05D004491 ORTHO05D006742 1.5e-167 593.2 418 69.9
Rhsim13G0018200 Rhododendron simsii HOM05D004491 ORTHO05D006742 5.9e-167 591.3 414 70.3
SGA_v2.0_scaffold60G20898 Striga asiatica HOM05D004491 ORTHO05D006742 7.7e-167 590.9 443 67.5
MSTRG.8371 Avicennia marina HOM05D004491 ORTHO05D006742 2.9e-166 589.0 412 70.1
ECA248G1403 Erigeron canadensis HOM05D004491 ORTHO05D006742 8.5e-166 587.4 413 69.2
HanXRQChr11g0334841 Helianthus annuus HOM05D004491 ORTHO05D006742 1.1e-165 587.0 408 69.6
Oeu022805.1 Olea europaea HOM05D004491 ORTHO05D006742 3.9e-163 578.6 455 64.2
AUR62043003 Chenopodium quinoa HOM05D004491 ORTHO05D006742 1.5e-162 576.6 417 67.1
unitig_37.g12470 Utricularia gibba HOM05D004491 ORTHO05D006742 7.4e-162 574.3 409 68.0
CSS0045203 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 3.7e-161 572.0 412 67.7
CDE01G0135 Ceratophyllum demersum HOM05D004491 ORTHO05D006742 4.8e-161 571.6 412 67.0
vmacro09175 Vaccinium macrocarpon HOM05D004491 ORTHO05D006742 1.2e-159 567.0 476 61.3
TAR365G0641 Trochodendron aralioides HOM05D004491 ORTHO05D006742 3.5e-159 565.5 409 68.5
CDE12G0180 Ceratophyllum demersum HOM05D004491 ORTHO05D006742 5.9e-159 564.7 412 66.3
EL10Ac5g11643 Beta vulgaris HOM05D004491 ORTHO05D006742 2.5e-157 559.3 466 60.3
TPR.G32310 Trifolium pratense HOM05D004491 ORTHO05D006742 9.4e-157 557.4 402 70.1
Dinv32984 Davidia involucrata HOM05D004682 ORTHO05D006197 3.6e-156 555.4 375 71.5
Lj1C40T6 Lonicera japonica HOM05D004491 ORTHO05D006742 1.8e-155 553.1 505 57.8
SEGI_03905 Sequoiadendron giganteum HOM05D004491 ORTHO05D006742 6.7e-155 551.2 410 65.4
MBI19_g09851_MAGBIO Magnolia biondii HOM05D004491 ORTHO05D006742 3.3e-154 548.9 419 66.1
COL.COLO4_08043 Corchorus olitorius HOM05D004491 ORTHO05D006742 8.2e-153 544.3 348 76.4
SHI15482 Sapria himalayana HOM05D004491 ORTHO05D006742 1.8e-152 543.1 432 63.7
Mapoly0023s0134 Marchantia polymorpha HOM05D004491 ORTHO05D006742 5.2e-147 525.0 409 63.1
HPP92_001332 Vanilla planifolia HOM05D004491 ORTHO05D006742 6.8e-147 524.6 413 63.4
Duzib133G1404 Durio zibethinus HOM05D004491 ORTHO05D006742 2.8e-145 519.2 328 76.5
Pp3c4_25410 Physcomitrium patens HOM05D004491 ORTHO05D006742 3.6e-140 502.3 410 59.3
AagrBONN_evm.TU.Sc2ySwM_228.2306 Anthoceros agrestis HOM05D004491 ORTHO05D006742 7.5e-138 494.6 409 58.2
CAN.G1209.44 Capsicum annuum HOM05D004491 ORTHO05D006742 6.1e-132 474.9 303 74.6
SMO011G0024 Selaginella moellendorffii HOM05D004491 ORTHO05D006742 2.0e-130 469.9 410 57.3
Sc05g0004670 Simmondsia chinensis HOM05D004491 ORTHO05D006742 1.7e-129 466.8 333 69.1
AUR62034024 Chenopodium quinoa HOM05D004491 ORTHO05D006742 3.0e-126 456.1 335 67.2
Os01g0377700 Oryza sativa ssp. japonica HOM05D004491 ORTHO05D006742 1.2e-124 450.7 416 58.7
CSS0029376 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 7.5e-122 441.4 350 63.1
Zm00001eb366640 Zea mays HOM05D004491 ORTHO05D006742 1.7e-121 440.3 417 57.3
Zm00001eb146560 Zea mays HOM05D004491 ORTHO05D006742 4.1e-120 435.6 417 56.6
THA.LOC104820469 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 1.6e-119 433.7 238 88.7
PSO384G1012 Papaver somniferum HOM05D004491 ORTHO05D006742 1.8e-99 367.1 240 73.8
THA.LOC104799698 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 4.8e-84 315.8 179 86.6
PRCOL_00001630 Prasinoderma coloniale HOM05D004491 ORTHO05D006742 1.5e-82 310.8 431 42.9
Duzib147G1201 Durio zibethinus HOM05D004491 ORTHO05D006742 1.4e-72 277.7 235 62.1
MCO03G089 Micromonas commoda HOM05D004491 ORTHO05D006742 1.9e-69 267.3 392 40.6
Aa31sc35G70 Aethionema arabicum HOM05D004491 ORTHO05D006742 3.1e-67 260.0 187 73.3
Cre06.g293051 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D001132 1.1e-59 235.0 329 41.3
BcaB02g07304 Brassica carinata HOM05D004491 ORTHO05D091651 1.8e-46 191.0 220 51.8
GSVIVG01011019001 Vitis vinifera HOM05D004491 ORTHO05D006742 1.4e-43 181.4 115 75.7
Actinidia00704 Actinidia chinensis HOM05D004491 ORTHO05D019493 3.6e-39 166.8 238 44.1
Zm00001eb098320 Zea mays HOM05D004491 ORTHO05D006742 1.4e-35 154.8 127 60.6
Sopen08g018880 Solanum pennellii HOM05D004491 ORTHO05D006742 2.3e-30 137.5 80 80.0
BcaC08g45254 Brassica carinata HOM05D004491 ORTHO05D032214 3.0e-30 137.1 74 87.8
BolC6t38019H Brassica oleracea HOM05D004491 ORTHO05D032214 3.0e-30 137.1 74 87.8
C06p28510 Brassica napus HOM05D004491 ORTHO05D032214 5.7e-29 132.9 74 85.1
C08p37710 Brassica napus HOM05D004491 ORTHO05D031847 1.7e-28 131.3 88 75.0
BolC8t51354H Brassica oleracea HOM05D004491 ORTHO05D031847 1.7e-28 131.3 88 75.0
BcaC07g40782 Brassica carinata HOM05D004491 ORTHO05D031847 1.2e-26 125.2 88 73.9
AUR62034023 Chenopodium quinoa HOM05D004491 ORTHO05D019493 1.6e-26 124.8 85 65.9
Gohir.A11G248600 Gossypium hirsutum HOM05D004491 ORTHO05D019493 1.0e-22 112.1 88 61.4
BcaC07g42722 Brassica carinata HOM05D004491 ORTHO05D095981 4.0e-22 110.2 66 78.8
Gohir.A04G054626 Gossypium hirsutum HOM05D004491 ORTHO05D019493 2.6e-21 107.5 84 61.9
SEGI_06416 Sequoiadendron giganteum HOM05D004491 ORTHO05D019493 1.3e-20 105.1 83 55.4
HPP92_013688 Vanilla planifolia HOM05D004491 ORTHO05D006742 7.0e-19 99.4 81 63.0
BcaC07g42719 Brassica carinata HOM05D004491 ORTHO05D094938 2.0e-18 97.8 66 74.2
Actinidia28542 Actinidia chinensis HOM05D004491 ORTHO05D057841 4.5e-18 96.7 183 38.8
BolC6t38020H Brassica oleracea HOM05D004491 ORTHO05D040597 5.0e-17 93.2 115 49.6
C06p28520 Brassica napus HOM05D004491 ORTHO05D040597 6.6e-17 92.8 115 48.7
SHI00898 Sapria himalayana HOM05D004491 ORTHO05D019493 1.6e-15 88.2 73 56.2
A09p54850 Brassica napus HOM05D004491 ORTHO05D102086 4.0e-14 83.6 125 44.8
SHI19086 Sapria himalayana HOM05D004491 ORTHO05D019493 1.7e-12 78.2 59 62.7
CAN.G1682.2 Capsicum annuum HOM05D011687 ORTHO05D014163 1.5e-08 65.1 87 41.4


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