Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G40640 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 5.8e-61 238.8 326 100.0
AT3G58840 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 1.1e-46 191.4 148 73.6
Carub.0005s2562 Capsella rubella HOM05D006785 ORTHO05D006259 6.5e-44 182.2 148 80.4
CARHR169250 Cardamine hirsuta HOM05D006785 ORTHO05D006259 1.0e-36 158.3 148 69.6
Sp4g24990 Schrenkiella parvula HOM05D006785 ORTHO05D006259 1.2e-26 124.8 145 53.8
Thhalv10006112m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 5.7e-24 115.9 148 62.8
Sp5g04020 Schrenkiella parvula HOM05D006785 ORTHO05D006259 1.0e-20 105.1 148 52.7
C04p03820 Brassica napus HOM05D006785 ORTHO05D006259 1.3e-20 104.8 147 50.3
BolC4t22018H Brassica oleracea HOM05D006785 ORTHO05D006259 3.8e-20 103.2 147 49.7
BraA05t19307Z Brassica rapa HOM05D006785 ORTHO05D006259 2.5e-19 100.5 147 48.3
THA.LOC104802276 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 4.2e-19 99.8 148 44.6
A05p03170 Brassica napus HOM05D006785 ORTHO05D006259 1.4e-14 84.7 78 64.1
BcaB02g07495 Brassica carinata HOM05D006785 ORTHO05D006259 7.0e-14 82.4 112 53.6
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 2.0e-08 64.3 152 32.2
BcaB06g29269 Brassica carinata HOM05D006785 ORTHO05D006259 7.5e-08 62.4 116 45.7
A07p24380 Brassica napus HOM05D006785 ORTHO05D006259 1.3e-07 61.6 73 54.8
Cpa.g.sc50.80 Carica papaya HOM05D006785 ORTHO05D006259 6.3e-07 59.3 108 41.7
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 8.3e-07 58.9 101 35.6
Lalb_Chr17g0348301 Lupinus albus HOM05D006785 ORTHO05D006259 1.4e-06 58.2 99 40.4
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 1.4e-06 58.2 102 34.3
Atru.chr6.2094 Acer truncatum HOM05D006785 ORTHO05D006259 9.1e-06 55.5 106 40.6


User provided reference genes

Program Settings