Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G33310 Arabidopsis lyrata HOM05D014722 ORTHO05D016586 5.3e-80 301.2 182 100.0
Carub.0005s1896 Capsella rubella HOM05D014722 ORTHO05D016586 7.0e-56 221.1 190 78.4
AT3G52550 Arabidopsis thaliana HOM05D014722 ORTHO05D016586 1.0e-54 217.2 182 78.6
CARHR162330 Cardamine hirsuta HOM05D014722 ORTHO05D016586 2.4e-40 169.5 184 65.8
A09p45640 Brassica napus HOM05D014722 ORTHO05D016586 1.3e-38 163.7 184 66.3
BraA09t40025Z Brassica rapa HOM05D014722 ORTHO05D016586 1.5e-37 160.2 184 57.1
C08p27840 Brassica napus HOM05D014722 ORTHO05D016586 5.6e-37 158.3 184 62.0
Sp5g09760 Schrenkiella parvula HOM05D014722 ORTHO05D016586 9.5e-37 157.5 164 59.8
BolC8t50399H Brassica oleracea HOM05D014722 ORTHO05D016586 2.8e-36 156.0 185 59.5
Thhalv10011040m.g Eutrema salsugineum HOM05D014722 ORTHO05D016586 1.5e-29 133.7 148 55.4
BraA05t19930Z Brassica rapa HOM05D001000 ORTHO05D001896 5.4e-16 88.6 145 41.4
A05p09780 Brassica napus HOM05D001000 ORTHO05D001896 1.6e-15 87.0 145 40.7
BcaB02g09388 Brassica carinata HOM05D001000 ORTHO05D001896 5.1e-14 82.0 145 39.3
C08p27830 Brassica napus HOM05D001000 ORTHO05D001896 3.6e-12 75.9 137 41.6
BolC8t50398H Brassica oleracea HOM05D001000 ORTHO05D001896 3.6e-12 75.9 137 41.6
BraA09t40024Z Brassica rapa HOM05D001000 ORTHO05D001896 3.6e-12 75.9 137 41.6
Aa31LG5G21200 Aethionema arabicum HOM05D001000 ORTHO05D001896 4.8e-12 75.5 137 39.4
BcaB01g00359 Brassica carinata HOM05D001000 ORTHO05D001896 4.8e-12 75.5 137 41.6
BcaC07g39622 Brassica carinata HOM05D001000 ORTHO05D001896 8.1e-12 74.7 137 41.6
A09p45630 Brassica napus HOM05D001000 ORTHO05D001896 1.4e-11 73.9 137 40.9
THA.LOC104803475 Tarenaya hassleriana HOM05D001000 ORTHO05D001896 1.8e-11 73.6 144 41.0
BcaC02g11705 Brassica carinata HOM05D001000 ORTHO05D001896 6.9e-11 71.6 143 37.1
C04p12140 Brassica napus HOM05D001000 ORTHO05D001896 6.9e-11 71.6 143 37.1
BolC4t22858H Brassica oleracea HOM05D001000 ORTHO05D001896 6.9e-11 71.6 143 37.1
THA.LOC104823637 Tarenaya hassleriana HOM05D001000 ORTHO05D001896 1.5e-10 70.5 139 38.8
Thhalv10017064m.g Eutrema salsugineum HOM05D001000 ORTHO05D001896 2.6e-10 69.7 144 39.6
AT2G36050 Arabidopsis thaliana HOM05D001000 ORTHO05D001896 3.4e-10 69.3 140 35.0
AT3G52540 Arabidopsis thaliana HOM05D001000 ORTHO05D001896 2.2e-09 66.6 64 64.1
BcaB06g28911 Brassica carinata HOM05D001000 ORTHO05D001896 2.9e-09 66.2 144 37.5
AL5G33300 Arabidopsis lyrata HOM05D001000 ORTHO05D001896 1.9e-08 63.5 63 61.9
Sp4g18300 Schrenkiella parvula HOM05D001000 ORTHO05D001896 4.2e-08 62.4 147 34.7
AL4G32140 Arabidopsis lyrata HOM05D001000 ORTHO05D001896 7.1e-08 61.6 144 32.6
A04p27610 Brassica napus HOM05D001000 ORTHO05D001896 9.3e-08 61.2 143 35.0
C04p65110 Brassica napus HOM05D001000 ORTHO05D001896 9.3e-08 61.2 143 35.0
BraA04t18256Z Brassica rapa HOM05D001000 ORTHO05D001896 9.3e-08 61.2 143 35.0
BolC4t27989H Brassica oleracea HOM05D001000 ORTHO05D001896 2.1e-07 60.1 147 34.0
BcaC02g07635 Brassica carinata HOM05D001000 ORTHO05D001896 4.6e-07 58.9 143 34.3
BcaB02g07831 Brassica carinata HOM05D001000 ORTHO05D001896 6.0e-07 58.5 143 35.7
CARHR162320 Cardamine hirsuta HOM05D001000 ORTHO05D001896 6.0e-07 58.5 38 78.9
Carub.0005s1895 Capsella rubella HOM05D001000 ORTHO05D001896 6.7e-06 55.1 146 31.5
Carub.0004s1779 Capsella rubella HOM05D001000 ORTHO05D001896 8.7e-06 54.7 144 31.9


User provided reference genes

Program Settings