Gene: AT3G52540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G52540
  • Transcript Identifier AT3G52540.1
  • Gene Type Coding gene
  • Location Chr3 : 19488716-19489564 : negative

Gene Family Information

  • ID HOM05D001000
  • #Genes/#Species 605/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G52540.1
  • symbol OFP18
  • Alias ATOFP18,ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 18
  • uniprot Q9SVD5

Descriptions

  • Description ovate family protein 18
  • Computational description ovate family protein 18 (OFP18); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623 (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: ovate family protein 15 (TAIR:AT2G36050.1); Has 432 Blast hits to 323 proteins in 54 species: Archae - 0; Bacteria - 2; Metazoa - 90; Fungi - 44; Plants - 215; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045892
IEA
GOA Databasenegative regulation of transcription, DNA-templated
GO:0045892
IDA
Gene Ontologynegative regulation of transcription, DNA-templated1
GO:0045892
IEA
InterPronegative regulation of transcription, DNA-templated
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development Solyc01g007810.1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006458 Ovate protein family, C-terminal
IPR038933 Ovate protein family
Mapman id Description
15.5.35 RNA biosynthesis.transcriptional regulation.transcription factor (OFP)