Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G12800 Arabidopsis lyrata HOM05D004594 ORTHO05D005225 0.0e+00 2141.3 1340 100.0
AT2G03150 Arabidopsis thaliana HOM05D004594 ORTHO05D005225 0.0e+00 1833.2 1343 87.0
Carub.0005s0198 Capsella rubella HOM05D004594 ORTHO05D005225 0.0e+00 1741.5 1373 81.6
CARHR145490 Cardamine hirsuta HOM05D004594 ORTHO05D005225 0.0e+00 1683.3 1377 77.5
Sp2g14100 Schrenkiella parvula HOM05D004594 ORTHO05D005225 0.0e+00 1553.5 1377 74.9
Thhalv10005550m.g Eutrema salsugineum HOM05D004594 ORTHO05D005225 0.0e+00 1481.1 1388 75.1
C09p31000 Brassica napus HOM05D004594 ORTHO05D005225 0.0e+00 1441.4 1352 74.0
BcaC04g21505 Brassica carinata HOM05D004594 ORTHO05D005225 0.0e+00 1436.8 1353 74.1
BolC9t55959H Brassica oleracea HOM05D004594 ORTHO05D005225 0.0e+00 1427.2 1353 74.5
A09p24110 Brassica napus HOM05D004594 ORTHO05D005225 0.0e+00 1414.8 1346 73.2
BraA09t38011Z Brassica rapa HOM05D004594 ORTHO05D005225 0.0e+00 1414.8 1346 73.2
BcaB07g30683 Brassica carinata HOM05D004594 ORTHO05D005225 0.0e+00 1409.8 1345 72.9
Aa31LG2G7300 Aethionema arabicum HOM05D004594 ORTHO05D005225 0.0e+00 1366.3 1366 68.7
THA.LOC104824075 Tarenaya hassleriana HOM05D004594 ORTHO05D005225 0.0e+00 1227.2 1413 63.0
Dinv02961 Davidia involucrata HOM05D004594 ORTHO05D005225 4.7e-250 869.0 1479 50.4
Duzib248G1210 Durio zibethinus HOM05D004594 ORTHO05D005225 1.8e-249 867.1 1463 49.1
C02p51140 Brassica napus HOM05D004594 ORTHO05D005225 1.9e-246 857.1 1241 48.9
CANSAT64G0453 Cannabis sativa HOM05D004594 ORTHO05D005225 2.1e-242 843.6 1452 48.1
QL03p068116 Quercus lobata HOM05D004594 ORTHO05D005225 2.1e-237 827.0 1470 44.3
Thecc.02G342500 Theobroma cacao HOM05D004594 ORTHO05D005225 4.3e-235 819.3 1493 47.1
Gohir.D04G191200 Gossypium hirsutum HOM05D004594 ORTHO05D005225 8.1e-234 815.1 1463 49.1
Gorai.012G186600 Gossypium raimondii HOM05D004594 ORTHO05D005225 2.6e-232 810.1 1463 50.0
Cfa008959 Carpinus fangiana HOM05D004594 ORTHO05D005225 5.8e-232 808.9 1462 47.1
Eucgr.G02485 Eucalyptus grandis HOM05D004594 ORTHO05D005225 6.4e-231 805.4 1482 45.1
FvH4_4g31060 Fragaria vesca HOM05D004594 ORTHO05D005225 6.4e-231 805.4 1463 45.4
MD16G1069300 Malus domestica HOM05D004594 ORTHO05D005225 6.4e-231 805.4 1438 45.3
Manes.05G104800 Manihot esculenta HOM05D004594 ORTHO05D005225 2.4e-230 803.5 1464 44.8
FAN17G1193 Fragaria x ananassa HOM05D004594 ORTHO05D005225 4.2e-230 802.7 1459 44.3
RcHm_v2.0_Chr4g0439441 Rosa chinensis HOM05D004594 ORTHO05D005225 9.3e-230 801.6 1457 45.7
FAN07G2218 Fragaria x ananassa HOM05D004594 ORTHO05D005225 2.1e-229 800.4 1462 44.8
GSVIVG01019950001 Vitis vinifera HOM05D004594 ORTHO05D005225 2.7e-229 800.0 1483 44.6
CiPaw.06G087400 Carya illinoinensis HOM05D004594 ORTHO05D005225 3.5e-229 799.7 1453 43.4
FAN22G0563 Fragaria x ananassa HOM05D004594 ORTHO05D005225 1.7e-228 797.3 1469 44.0
Ciclev10030522m.g Citrus clementina HOM05D004594 ORTHO05D005225 6.6e-228 795.4 1425 44.7
Potri.010G166100 Populus trichocarpa HOM05D004594 ORTHO05D005225 1.5e-227 794.3 1515 41.7
Psat2g116320 Pisum sativum HOM05D004594 ORTHO05D005225 2.1e-226 790.4 1495 46.3
Ca_04825_v3 Cicer arietinum L. HOM05D004594 ORTHO05D005225 4.8e-226 789.3 1508 44.6
TWI79G0308 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 6.2e-226 788.9 1449 46.4
TWI75G1472 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 1.4e-225 787.7 1510 44.4
Actinidia11790 Actinidia chinensis HOM05D004594 ORTHO05D005225 2.0e-224 783.9 1509 44.3
FAN12G0764 Fragaria x ananassa HOM05D004594 ORTHO05D005225 4.9e-223 779.2 1486 45.1
Glyma.01G051400 Glycine max HOM05D004594 ORTHO05D005225 4.9e-223 779.2 1468 46.5
Haze_11988 Corylus avellana HOM05D004594 ORTHO05D005225 5.4e-222 775.8 1542 44.0
PGR119G1944 Punica granatum HOM05D004594 ORTHO05D005225 2.1e-221 773.9 1437 46.1
Manes.01G034200 Manihot esculenta HOM05D004594 ORTHO05D005225 4.6e-221 772.7 1465 42.9
Phvul.003G045700 Phaseolus vulgaris HOM05D004594 ORTHO05D005225 8.7e-220 768.5 1451 42.6
Glyma.02G109900 Glycine max HOM05D004594 ORTHO05D005225 8.1e-218 761.9 1511 44.6
Prupe.1G277900 Prunus persica HOM05D004594 ORTHO05D005225 6.9e-217 758.8 1476 44.2
ClCG09G021930 Citrullus lanatus HOM05D004594 ORTHO05D005225 1.3e-212 744.6 1551 41.1
Sabra10G0126400 Salix brachista HOM05D004594 ORTHO05D005225 1.3e-212 744.6 1539 41.8
VMungo1215G3128 Vigna mungo HOM05D004594 ORTHO05D005225 3.0e-212 743.4 1506 41.6
arahy.Tifrunner.gnm1.ann1.8R27D6 Arachis hypogaea HOM05D004594 ORTHO05D005225 5.1e-212 742.7 1498 44.6
DCAR_013185 Daucus carota HOM05D004594 ORTHO05D005225 3.3e-211 740.0 1500 43.7
CsaV3_5G025180 Cucumis sativus L. HOM05D004594 ORTHO05D005225 1.6e-210 737.6 1507 42.0
AUR62035898 Chenopodium quinoa HOM05D004594 ORTHO05D005225 6.2e-210 735.7 1470 41.8
Lj2g0016635 Lotus japonicus HOM05D004594 ORTHO05D005225 1.8e-209 734.2 1502 44.7
Lalb_Chr10g0098431 Lupinus albus HOM05D004594 ORTHO05D005225 1.8e-209 734.2 1495 44.5
Nn1g04524 Nelumbo nucifera HOM05D004594 ORTHO05D005225 1.5e-208 731.1 1482 46.1
Hund25219 Selenicereus undatus HOM05D004594 ORTHO05D005225 7.6e-208 728.8 1460 44.5
CiPaw.05G132100 Carya illinoinensis HOM05D004594 ORTHO05D005225 8.4e-207 725.3 1400 44.4
MELO3C002967.2 Cucumis melo HOM05D004594 ORTHO05D005225 2.5e-206 723.8 1506 42.7
EL10Ac3g06731 Beta vulgaris HOM05D004594 ORTHO05D005225 1.2e-205 721.5 1464 43.1
Sed0022637 Sechium edule HOM05D004594 ORTHO05D005225 5.1e-204 716.1 1472 41.6
Sopen04g003850 Solanum pennellii HOM05D004594 ORTHO05D005225 5.7e-203 712.6 1461 40.7
TAR371G0293 Trochodendron aralioides HOM05D004594 ORTHO05D005225 4.1e-201 706.4 1491 42.1
Atru.chr11.1750 Acer truncatum HOM05D004594 ORTHO05D005225 1.4e-196 691.4 718 59.7
AUR62035342 Chenopodium quinoa HOM05D004594 ORTHO05D005225 5.1e-196 689.5 1373 41.4
Nitab4.5_0000129g0280 Nicotiana tabacum HOM05D004594 ORTHO05D005225 2.5e-195 687.2 1478 42.3
TPR.G34709 Trifolium pratense HOM05D004594 ORTHO05D005225 5.7e-195 686.0 1458 44.7
PSO832G1080 Papaver somniferum HOM05D004594 ORTHO05D005225 2.8e-194 683.7 1485 41.3
Cc00_g08470 Coffea canephora HOM05D004594 ORTHO05D005225 4.8e-194 682.9 1525 39.3
Peaxi162Scf00329g00617 Petunia axillaris HOM05D004594 ORTHO05D005225 6.3e-194 682.6 1433 42.6
Rhsim09G0077000 Rhododendron simsii HOM05D004594 ORTHO05D005225 1.4e-193 681.4 1538 40.1
CAN.G194.5 Capsicum annuum HOM05D004594 ORTHO05D005225 6.9e-193 679.1 1453 42.1
Migut.E00588 Erythranthe guttata HOM05D004594 ORTHO05D005225 1.1e-190 671.8 1473 42.0
Ah.13g075020 Amaranthus hybridus HOM05D004594 ORTHO05D005225 7.9e-189 665.6 1466 40.9
PSO013G0146 Papaver somniferum HOM05D004594 ORTHO05D005225 2.0e-187 661.0 1473 40.1
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea HOM05D004594 ORTHO05D005225 8.2e-186 655.6 1628 39.1
Aqoxy3G03454 Aquilegia oxysepala HOM05D004594 ORTHO05D005225 3.1e-185 653.7 1460 38.6
Solyc04g008680.4 Solanum lycopersicum HOM05D004594 ORTHO05D005225 4.1e-185 653.3 1357 41.9
ECA233G5935 Erigeron canadensis HOM05D004594 ORTHO05D005225 3.2e-182 643.7 1485 38.7
ECA246G2651 Erigeron canadensis HOM05D004594 ORTHO05D005225 5.5e-182 642.9 1456 41.0
Medtr5g042000 Medicago truncatula HOM05D004594 ORTHO05D005225 7.2e-182 642.5 1574 40.2
Cpa.g.sc25.130 Carica papaya HOM05D004594 ORTHO05D005225 1.4e-177 628.2 1459 42.3
Sc11g0002090 Simmondsia chinensis HOM05D004594 ORTHO05D005225 6.5e-175 619.4 1216 40.9
Lsat_1_v5_gn_3_33900 Lactuca sativa HOM05D004594 ORTHO05D005225 1.1e-174 618.6 1446 39.9
TAR629G1990 Trochodendron aralioides HOM05D004594 ORTHO05D005225 4.2e-174 616.7 1302 41.9
Nitab4.5_0001419g0070 Nicotiana tabacum HOM05D004594 ORTHO05D005225 3.3e-171 607.1 1536 38.7
SGA_v2.0_scaffold140G35452 Striga asiatica HOM05D004594 ORTHO05D005225 4.7e-165 586.6 1523 37.6
HanXRQChr08g0224741 Helianthus annuus HOM05D004594 ORTHO05D005225 1.3e-162 578.6 1435 37.6
Oeu044046.4 Olea europaea HOM05D004594 ORTHO05D005225 2.7e-160 570.9 1243 39.1
CDE07G1889 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 8.0e-157 559.3 1386 38.7
Lsat_1_v5_gn_8_32581 Lactuca sativa HOM05D004594 ORTHO05D005225 2.8e-154 550.8 1416 37.4
HanXRQChr17g0540651 Helianthus annuus HOM05D004594 ORTHO05D005225 5.4e-153 546.6 1378 42.5
MBI06_g33529_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 2.0e-147 528.1 919 42.4
HanXRQChr14g0429131 Helianthus annuus HOM05D004594 ORTHO05D005225 7.8e-144 516.2 1328 42.4
ATR0564G229 Amborella trichopoda HOM05D004594 ORTHO05D005225 1.7e-135 488.4 1498 36.2
Gohir.A04G146601 Gossypium hirsutum HOM05D004594 ORTHO05D005225 4.3e-134 483.8 598 57.4
HPP92_001998 Vanilla planifolia HOM05D004594 ORTHO05D005225 2.2e-130 471.5 1221 39.1
CDE04G0114 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 6.2e-125 453.4 1304 32.0
Zm00001eb384230 Zea mays HOM05D004594 ORTHO05D005225 2.4e-124 451.4 1463 34.1
SHI24774 Sapria himalayana HOM05D004594 ORTHO05D005225 1.1e-121 442.6 1167 32.6
Zm00001eb277410 Zea mays HOM05D004594 ORTHO05D005225 2.2e-114 418.3 1421 35.8
HanXRQChr08g0225211 Helianthus annuus HOM05D004594 ORTHO05D005225 1.2e-112 412.5 1301 33.1
unitig_52.g17301 Utricularia gibba HOM05D004594 ORTHO05D005225 5.3e-108 397.1 794 41.1
SEGI_16638 Sequoiadendron giganteum HOM05D004594 ORTHO05D005225 9.0e-92 343.2 1404 35.8
Gohir.1Z049516 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.5e-91 342.4 567 43.0
BcaC03g17185 Brassica carinata HOM05D004594 ORTHO05D005225 3.0e-87 328.2 718 40.1
BolC2t11204H Brassica oleracea HOM05D004594 ORTHO05D005225 4.1e-76 291.2 725 39.7
Pp3c12_12730 Physcomitrium patens HOM05D004594 ORTHO05D005225 5.3e-68 264.2 1284 27.4
SMO172G0003 Selaginella moellendorffii HOM05D004594 ORTHO05D005225 2.6e-59 235.3 883 27.1
Mapoly0102s0024 Marchantia polymorpha HOM05D004594 ORTHO05D005225 1.1e-57 229.9 1275 28.3
Pp3c4_10880 Physcomitrium patens HOM05D004594 ORTHO05D005225 6.1e-56 224.2 1281 26.1
AagrBONN_evm.TU.Sc2ySwM_340.1878 Anthoceros agrestis HOM05D004594 ORTHO05D005225 8.0e-56 223.8 1392 25.9
Atru.chr11.1748 Acer truncatum HOM05D004594 ORTHO05D005225 2.4e-52 212.2 372 52.7
CBR_g5747 Chara braunii HOM05D004594 ORTHO05D005225 3.8e-50 204.9 270 40.0
vmacro10769 Vaccinium macrocarpon HOM05D004594 ORTHO05D005225 2.0e-43 182.6 782 36.3
unitig_52.g17300 Utricularia gibba HOM05D004594 ORTHO05D005225 3.6e-32 145.2 374 42.2
Lj3E852T1 Lonicera japonica HOM05D004594 ORTHO05D005225 4.7e-32 144.8 264 39.0
Rhsim04G0150600 Rhododendron simsii HOM05D004594 ORTHO05D005225 1.7e-29 136.3 171 45.0
Os06g0562700 Oryza sativa ssp. japonica HOM05D004594 ORTHO05D005225 1.1e-28 133.7 369 36.3
A02p33250 Brassica napus HOM05D004594 ORTHO05D005225 1.9e-28 132.9 74 83.8
Oeu032954.1 Olea europaea HOM05D004594 ORTHO05D005225 1.2e-27 130.2 92 65.2
Gohir.1Z049616 Gossypium hirsutum HOM05D004594 ORTHO05D005225 2.3e-26 125.9 77 79.2
Lj3A852T53 Lonicera japonica HOM05D004594 ORTHO05D005225 6.6e-26 124.4 144 51.4
Oeu034639.1 Olea europaea HOM05D004594 ORTHO05D005225 2.3e-23 115.9 156 54.5
Lj3E852G2 Lonicera japonica HOM05D004594 ORTHO05D005225 3.1e-23 115.5 94 73.4
A02p33260 Brassica napus HOM05D004594 ORTHO05D005225 5.2e-23 114.8 259 37.1
TPR.G11445 Trifolium pratense HOM05D004594 ORTHO05D005225 1.4e-20 106.7 61 82.0
BcaB05g23630 Brassica carinata HOM05D004594 ORTHO05D005225 9.2e-20 104.0 152 51.3
Lsat_1_v5_gn_3_92661 Lactuca sativa HOM05D004594 ORTHO05D005225 4.3e-17 95.1 110 44.5
MBI02_g24139_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 9.5e-17 94.0 108 49.1
Lsat_1_v5_gn_4_108040 Lactuca sativa HOM05D004594 ORTHO05D005225 1.5e-14 86.7 56 64.3
BraA02t08348Z Brassica rapa HOM05D004594 ORTHO05D005225 5.8e-14 84.7 98 49.0
Cre06.g283634 Chlamydomonas reinhardtii HOM05D004594 ORTHO05D005225 5.8e-14 84.7 302 24.2
SHI24778 Sapria himalayana HOM05D004594 ORTHO05D005225 3.2e-12 79.0 69 63.8
A02p33240 Brassica napus HOM05D004594 ORTHO05D005225 5.4e-12 78.2 151 45.7
BcaB07g33689 Brassica carinata HOM05D004594 ORTHO05D021612 1.2e-11 77.0 63 61.9
MBI02_g24140_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 6.0e-11 74.7 126 45.2
CBR_g5749 Chara braunii HOM05D004594 ORTHO05D005225 1.5e-09 70.1 342 26.6
Lsat_1_v5_gn_1_53021 Lactuca sativa HOM05D004594 ORTHO05D005225 2.5e-09 69.3 60 51.7
HPP92_001999 Vanilla planifolia HOM05D004594 ORTHO05D005225 2.5e-09 69.3 91 41.8
RcHm_v2.0_Chr3g0458311 Rosa chinensis HOM05D004594 ORTHO05D005225 1.2e-08 67.0 87 44.8
MBI05_g14664_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 2.8e-08 65.9 50 62.0


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