Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G10340 Arabidopsis lyrata HOM05D001456 ORTHO05D079741 2.0e-135 485.7 243 100.0
Migut.N00970 Erythranthe guttata HOM05D001456 ORTHO05D002799 6.4e-12 75.5 182 31.9
CSS0023005 Camellia sinensis var. sinensis HOM05D001456 ORTHO05D002799 1.1e-11 74.7 163 30.7
Ah.11g045840 Amaranthus hybridus HOM05D001456 ORTHO05D002799 3.2e-11 73.2 162 32.1
SalBow4G0536 Salvia bowleyana HOM05D001456 ORTHO05D002799 5.4e-11 72.4 165 31.5
SalBow4G1768 Salvia bowleyana HOM05D001456 ORTHO05D002799 5.4e-11 72.4 165 31.5
EL10As5g23613 Beta vulgaris HOM05D001456 ORTHO05D002799 7.0e-11 72.0 166 29.5
MSTRG.16424 Avicennia marina HOM05D001456 ORTHO05D002799 9.2e-11 71.6 155 31.6
EL10Ac8g19630 Beta vulgaris HOM05D001456 ORTHO05D002799 9.2e-11 71.6 172 31.4
AUR62011701 Chenopodium quinoa HOM05D001456 ORTHO05D002799 9.2e-11 71.6 170 30.0
AUR62024558 Chenopodium quinoa HOM05D001456 ORTHO05D002799 9.2e-11 71.6 162 30.9
THA.LOC104817439 Tarenaya hassleriana HOM05D001456 ORTHO05D002799 9.2e-11 71.6 171 29.2
C02p61420 Brassica napus HOM05D001456 ORTHO05D014991 1.2e-10 71.2 158 28.5
ClCG01G007140 Citrullus lanatus HOM05D001456 ORTHO05D002799 1.2e-10 71.2 171 29.8
Oeu000099.1 Olea europaea HOM05D001456 ORTHO05D002799 1.2e-10 71.2 155 31.0
Ah.14g086290 Amaranthus hybridus HOM05D001456 ORTHO05D002799 1.6e-10 70.9 178 29.8
Oeu036643.2 Olea europaea HOM05D001456 ORTHO05D002799 1.6e-10 70.9 165 30.9
A02p41490 Brassica napus HOM05D001456 ORTHO05D014991 2.0e-10 70.5 158 29.1
BolC2t12194H Brassica oleracea HOM05D001456 ORTHO05D014991 2.0e-10 70.5 158 28.5
PGR031G1658 Punica granatum HOM05D001456 ORTHO05D002799 2.0e-10 70.5 178 32.0
Aa31LG11G2160 Aethionema arabicum HOM05D001456 ORTHO05D002799 3.5e-10 69.7 153 30.7
BraA02t09090Z Brassica rapa HOM05D001456 ORTHO05D014991 3.5e-10 69.7 158 28.5
MELO3C005198.2 Cucumis melo HOM05D001456 ORTHO05D002799 3.5e-10 69.7 165 29.7
PGR031G3055 Punica granatum HOM05D001456 ORTHO05D002799 3.5e-10 69.7 155 31.0
Sed0015340 Sechium edule HOM05D001456 ORTHO05D002799 3.5e-10 69.7 182 29.1
SGA_v2.0_scaffold5G02913 Striga asiatica HOM05D001456 ORTHO05D002799 3.5e-10 69.7 175 30.3
THA.LOC104802123 Tarenaya hassleriana HOM05D001456 ORTHO05D002799 3.5e-10 69.7 165 29.7
AUR62002684 Chenopodium quinoa HOM05D001456 ORTHO05D002799 6.0e-10 68.9 173 29.5
Hund11630 Selenicereus undatus HOM05D001456 ORTHO05D002799 6.0e-10 68.9 162 30.2
Carub.0008s2185 Capsella rubella HOM05D001456 ORTHO05D002799 7.8e-10 68.6 157 28.7
BcaC06g33212 Brassica carinata HOM05D001456 ORTHO05D027445 1.0e-09 68.2 152 30.3
C07p44860 Brassica napus HOM05D001456 ORTHO05D027445 1.0e-09 68.2 152 30.3
Aa31LG11G2170 Aethionema arabicum HOM05D001456 ORTHO05D002799 1.3e-09 67.8 165 30.9
DCAR_018246 Daucus carota HOM05D001456 ORTHO05D002799 1.3e-09 67.8 157 27.4
DCAR_018247 Daucus carota HOM05D000103 ORTHO05D002799 1.3e-09 67.8 157 27.4
Eucgr.H01318 Eucalyptus grandis HOM05D001456 ORTHO05D002799 1.3e-09 67.8 165 30.3
Sp5g01180 Schrenkiella parvula HOM05D001456 ORTHO05D002799 1.3e-09 67.8 171 26.3
AL5G44950 Arabidopsis lyrata HOM05D001456 ORTHO05D002799 1.7e-09 67.4 171 29.2
BcaC06g33175 Brassica carinata HOM05D001456 ORTHO05D002799 1.7e-09 67.4 152 28.9
BcaC06g33211 Brassica carinata HOM05D001456 ORTHO05D002799 1.7e-09 67.4 152 28.9
C07p44850 Brassica napus HOM05D001456 ORTHO05D002799 1.7e-09 67.4 152 28.9
BolC7t45008H Brassica oleracea HOM05D001456 ORTHO05D002799 1.7e-09 67.4 152 28.9
CARHR274930 Cardamine hirsuta HOM05D001456 ORTHO05D002799 1.7e-09 67.4 160 27.5
Prupe.3G003800 Prunus persica HOM05D001456 ORTHO05D002799 1.7e-09 67.4 159 30.8
THA.LOC104818337 Tarenaya hassleriana HOM05D001456 ORTHO05D002799 1.7e-09 67.4 162 30.9
AT3G62200 Arabidopsis thaliana HOM05D001456 ORTHO05D002799 2.3e-09 67.0 171 29.2
BolC7t45010H Brassica oleracea HOM05D001456 ORTHO05D027445 2.3e-09 67.0 152 28.9
A03p46800 Brassica napus HOM05D001456 ORTHO05D002799 3.0e-09 66.6 152 29.6
BraA03t13802Z Brassica rapa HOM05D001456 ORTHO05D027445 3.0e-09 66.6 152 29.6
Glyma.03G223251 Glycine max HOM05D001456 ORTHO05D002799 3.0e-09 66.6 151 29.8
CARHR172540 Cardamine hirsuta HOM05D001456 ORTHO05D002799 3.9e-09 66.2 155 29.0
MD17G1283700 Malus domestica HOM05D001456 ORTHO05D002799 3.9e-09 66.2 155 31.0
BcaC07g40712 Brassica carinata HOM05D001456 ORTHO05D002799 5.0e-09 65.9 155 27.7
A09p54270 Brassica napus HOM05D001456 ORTHO05D002799 5.0e-09 65.9 155 27.7
C08p37150 Brassica napus HOM05D001456 ORTHO05D002799 5.0e-09 65.9 155 27.7
BolC8t51292H Brassica oleracea HOM05D001456 ORTHO05D002799 5.0e-09 65.9 155 27.7
BraA09t40839Z Brassica rapa HOM05D001456 ORTHO05D002799 5.0e-09 65.9 155 27.7
QL03p010255 Quercus lobata HOM05D001456 ORTHO05D002799 5.0e-09 65.9 162 29.6
QL03p010491 Quercus lobata HOM05D001456 ORTHO05D002799 5.0e-09 65.9 162 29.6
Potri.013G003200 Populus trichocarpa HOM05D001456 ORTHO05D002799 6.6e-09 65.5 182 28.6
AUR62030141 Chenopodium quinoa HOM05D001456 ORTHO05D002799 8.6e-09 65.1 127 33.1
Thhalv10005803m.g Eutrema salsugineum HOM05D001456 ORTHO05D002799 8.6e-09 65.1 170 26.5
THA.LOC104801327 Tarenaya hassleriana HOM05D001456 ORTHO05D002799 8.6e-09 65.1 167 29.3
TAR365G0439 Trochodendron aralioides HOM05D001456 ORTHO05D002799 8.6e-09 65.1 165 30.3
AT3G62210 Arabidopsis thaliana HOM05D001456 ORTHO05D002799 1.1e-08 64.7 149 26.2
TAR362G0556 Trochodendron aralioides HOM05D001456 ORTHO05D002799 1.1e-08 64.7 184 28.8
AL8G37850 Arabidopsis lyrata HOM05D001456 ORTHO05D002799 1.5e-08 64.3 153 28.8
Carub.0005s2893 Capsella rubella HOM05D001456 ORTHO05D002799 1.5e-08 64.3 155 28.4
CiPaw.08G083800 Carya illinoinensis HOM05D001456 ORTHO05D002799 3.3e-08 63.2 186 28.0
SEGI_28425 Sequoiadendron giganteum HOM05D001456 ORTHO05D002799 4.3e-08 62.8 151 27.2
AT5G61190 Arabidopsis thaliana HOM05D001456 ORTHO05D002799 9.5e-08 61.6 153 27.5
CARHR172550 Cardamine hirsuta HOM05D001456 ORTHO05D002799 1.2e-07 61.2 181 24.3
Hund19612 Selenicereus undatus HOM05D004262 ORTHO05D004886 1.2e-07 61.2 148 27.0
BcaC07g39700 Brassica carinata HOM05D004837 ORTHO05D026816 1.6e-07 60.8 131 29.8
C08p28610 Brassica napus HOM05D001456 ORTHO05D026816 1.6e-07 60.8 131 29.8
Thhalv10003587m.g Eutrema salsugineum HOM05D001456 ORTHO05D002799 2.1e-07 60.5 160 26.9
Thhalv10003670m.g Eutrema salsugineum HOM05D001456 ORTHO05D014991 8.0e-07 58.5 152 27.0
Sc05g0000120 Simmondsia chinensis HOM05D001456 ORTHO05D002799 1.1e-06 58.2 118 31.4
BolC8t50466H Brassica oleracea HOM05D001456 ORTHO05D026816 1.8e-06 57.4 131 29.0
AUR62017940 Chenopodium quinoa HOM05D004262 ORTHO05D004886 4.0e-06 56.2 137 26.3


User provided reference genes

Program Settings