Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G44870 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 1.9e-36 155.2 74 100.0
AT2G45695 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 1.2e-35 152.5 73 97.3
Carub.0004s2835 Capsella rubella HOM05D006419 ORTHO05D008096 3.6e-35 151.0 73 95.9
Thhalv10001692m.g Eutrema salsugineum HOM05D006419 ORTHO05D008096 9.9e-33 142.9 73 94.5
Sp4g27740 Schrenkiella parvula HOM05D006419 ORTHO05D008096 9.9e-33 142.9 73 94.5
CARHR140920 Cardamine hirsuta HOM05D006419 ORTHO05D008096 8.4e-32 139.8 73 91.8
BcaB01g03257 Brassica carinata HOM05D006419 ORTHO05D008096 9.3e-31 136.3 73 89.0
BcaC01g05111 Brassica carinata HOM05D006419 ORTHO05D008096 7.8e-30 133.3 73 87.7
A03p25320 Brassica napus HOM05D006419 ORTHO05D008096 7.8e-30 133.3 73 87.7
C03p30210 Brassica napus HOM05D006419 ORTHO05D008096 7.8e-30 133.3 73 87.7
BolC3t15370H Brassica oleracea HOM05D006419 ORTHO05D008096 7.8e-30 133.3 73 87.7
BraA03t11736Z Brassica rapa HOM05D006419 ORTHO05D008096 1.7e-29 132.1 73 86.3
THA.LOC104802008 Tarenaya hassleriana HOM05D006419 ORTHO05D008096 2.3e-29 131.7 73 86.3
BcaB06g29431 Brassica carinata HOM05D006419 ORTHO05D008096 3.9e-29 131.0 73 86.3
Aa31LG1G27170 Aethionema arabicum HOM05D006419 ORTHO05D008096 2.5e-28 128.3 73 84.9
AL5G43350 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 4.3e-28 127.5 73 84.9
arahy.Tifrunner.gnm1.ann1.PAP2UH Arachis hypogaea HOM05D006419 ORTHO05D008096 9.6e-28 126.3 73 83.6
Phvul.010G089300 Phaseolus vulgaris HOM05D006419 ORTHO05D008096 9.6e-28 126.3 73 83.6
Lsat_1_v5_gn_8_87621 Lactuca sativa HOM05D006419 ORTHO05D008096 2.1e-27 125.2 73 82.2
HanXRQChr04g0126261 Helianthus annuus HOM05D006419 ORTHO05D008096 2.8e-27 124.8 73 82.2
Lalb_Chr10g0097581 Lupinus albus HOM05D006419 ORTHO05D008096 2.8e-27 124.8 73 83.6
Rhsim07G0022300 Rhododendron simsii HOM05D006419 ORTHO05D008096 2.8e-27 124.8 73 83.6
arahy.Tifrunner.gnm1.ann1.V3JJAU Arachis hypogaea HOM05D006419 ORTHO05D008096 3.6e-27 124.4 73 83.6
Lj1g0008204 Lotus japonicus HOM05D006419 ORTHO05D008096 3.6e-27 124.4 73 83.6
Medtr8g032860 Medicago truncatula HOM05D006419 ORTHO05D008096 3.6e-27 124.4 73 80.8
Duzib138G0401 Durio zibethinus HOM05D006419 ORTHO05D008096 4.8e-27 124.0 73 80.8
AT3G61113 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 6.2e-27 123.6 73 83.6
QL08p050901 Quercus lobata HOM05D006419 ORTHO05D008096 6.2e-27 123.6 73 80.8
Ca_23766_v3 Cicer arietinum L. HOM05D006419 ORTHO05D008096 8.1e-27 123.2 73 82.2
Lalb_Chr17g0340031 Lupinus albus HOM05D006419 ORTHO05D008096 8.1e-27 123.2 73 82.2
TPR.G17971 Trifolium pratense HOM05D006419 ORTHO05D008096 8.1e-27 123.2 73 80.8
Duzib133G0791 Durio zibethinus HOM05D006419 ORTHO05D008096 1.1e-26 122.9 73 79.5
COL.COLO4_12638 Corchorus olitorius HOM05D006419 ORTHO05D008096 1.4e-26 122.5 73 82.2
ECA236G2030 Erigeron canadensis HOM05D002941 ORTHO05D007802 1.4e-26 122.5 73 82.2
Thecc.01G370100 Theobroma cacao HOM05D006419 ORTHO05D008096 1.4e-26 122.5 73 78.1
TWI59G0287 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 1.4e-26 122.5 73 82.2
Haze_16703 Corylus avellana HOM05D006419 ORTHO05D008096 1.8e-26 122.1 73 80.8
Atru.chr5.383 Acer truncatum HOM05D006419 ORTHO05D008096 2.4e-26 121.7 73 82.2
Aqoxy7G00481 Aquilegia oxysepala HOM05D006419 ORTHO05D008096 3.1e-26 121.3 73 82.2
Cfa001844 Carpinus fangiana HOM05D006419 ORTHO05D008096 3.1e-26 121.3 73 80.8
Psat4g151440 Pisum sativum HOM05D006419 ORTHO05D008096 3.1e-26 121.3 73 76.7
SGA_v2.0_scaffold24G10498 Striga asiatica HOM05D006419 ORTHO05D008096 4.0e-26 120.9 73 82.2
CANSAT56G1223 Cannabis sativa HOM05D006419 ORTHO05D008096 5.3e-26 120.6 73 79.5
Migut.C01180 Erythranthe guttata HOM05D006419 ORTHO05D008096 5.3e-26 120.6 73 82.2
ClCG06G000160 Citrullus lanatus HOM05D006419 ORTHO05D008096 6.9e-26 120.2 73 80.8
Glyma.07G080100 Glycine max HOM05D006419 ORTHO05D008096 6.9e-26 120.2 73 79.5
Oeu032965.1 Olea europaea HOM05D006419 ORTHO05D008096 9.0e-26 119.8 73 78.1
Gohir.D11G088500 Gossypium hirsutum HOM05D006419 ORTHO05D008096 1.2e-25 119.4 73 78.1
Gorai.007G094600 Gossypium raimondii HOM05D006419 ORTHO05D008096 1.2e-25 119.4 73 78.1
Manes.01G263100 Manihot esculenta HOM05D006419 ORTHO05D008096 1.2e-25 119.4 73 76.7
Nn6g34296 Nelumbo nucifera HOM05D006419 ORTHO05D008096 1.2e-25 119.4 73 79.5
Prupe.1G200200 Prunus persica HOM05D006419 ORTHO05D008096 1.2e-25 119.4 73 78.1
EL10Ac1g00975 Beta vulgaris HOM05D006419 ORTHO05D008096 2.0e-25 118.6 73 79.5
Nitab4.5_0001127g0020 Nicotiana tabacum HOM05D006419 ORTHO05D008096 2.0e-25 118.6 73 78.1
Nitab4.5_0013229g0010 Nicotiana tabacum HOM05D006419 ORTHO05D008096 2.0e-25 118.6 73 78.1
Hund09553 Selenicereus undatus HOM05D006419 ORTHO05D008096 2.0e-25 118.6 73 79.5
MSTRG.1480 Avicennia marina HOM05D006419 ORTHO05D008096 2.6e-25 118.2 73 78.1
CiPaw.01G257500 Carya illinoinensis HOM05D006419 ORTHO05D008096 2.6e-25 118.2 73 80.8
Sc23g0003380 Simmondsia chinensis HOM05D006419 ORTHO05D008096 2.6e-25 118.2 73 78.1
Cc02_g37090 Coffea canephora HOM05D006419 ORTHO05D008096 3.4e-25 117.9 73 80.8
Hund16966 Selenicereus undatus HOM05D006419 ORTHO05D008096 3.4e-25 117.9 73 78.1
PGSC0003DMG400000132 Solanum tuberosum HOM05D006419 ORTHO05D008096 3.4e-25 117.9 73 78.1
Actinidia31456 Actinidia chinensis HOM05D006419 ORTHO05D008096 4.4e-25 117.5 73 78.1
MD04G1046600 Malus domestica HOM05D006419 ORTHO05D008096 4.4e-25 117.5 73 80.8
Dinv32413 Davidia involucrata HOM05D006419 ORTHO05D008096 5.8e-25 117.1 73 79.5
PGR042G1692 Punica granatum HOM05D006419 ORTHO05D008096 5.8e-25 117.1 73 74.0
Actinidia09582 Actinidia chinensis HOM05D006419 ORTHO05D008096 7.6e-25 116.7 73 78.1
Gohir.A11G084400 Gossypium hirsutum HOM05D006419 ORTHO05D008096 7.6e-25 116.7 73 76.7
Oeu050256.1 Olea europaea HOM05D006419 ORTHO05D008096 7.6e-25 116.7 73 78.1
TWI14G0146 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 7.6e-25 116.7 73 78.1
Hma1.2p1_0132F.1_g060780 Hydrangea macrophylla HOM05D006419 ORTHO05D008096 9.9e-25 116.3 73 78.1
Peaxi162Scf00021g00237 Petunia axillaris HOM05D006419 ORTHO05D008096 9.9e-25 116.3 73 76.7
Sed0009830 Sechium edule HOM05D006419 ORTHO05D008096 9.9e-25 116.3 73 78.1
Solyc01g091890.3 Solanum lycopersicum HOM05D006419 ORTHO05D008096 9.9e-25 116.3 73 76.7
Sopen01g037660 Solanum pennellii HOM05D006419 ORTHO05D008096 9.9e-25 116.3 73 76.7
GSVIVG01027592001 Vitis vinifera HOM05D006419 ORTHO05D008096 9.9e-25 116.3 73 79.5
A04p33960 Brassica napus HOM05D006419 ORTHO05D008096 1.3e-24 115.9 63 87.3
Sabra14G0054000 Salix brachista HOM05D006419 ORTHO05D008096 1.3e-24 115.9 73 80.8
MSTRG.25406 Avicennia marina HOM05D006419 ORTHO05D008096 1.7e-24 115.5 73 79.5
Dinv43747 Davidia involucrata HOM05D006419 ORTHO05D008096 1.7e-24 115.5 73 78.1
FvH4_1g27190 Fragaria vesca HOM05D006419 ORTHO05D008096 1.7e-24 115.5 73 75.3
RcHm_v2.0_Chr3g0487581 Rosa chinensis HOM05D006419 ORTHO05D008096 1.7e-24 115.5 73 75.3
MBI04_g28569_MAGBIO Magnolia biondii HOM05D006419 ORTHO05D008096 2.9e-24 114.8 73 76.7
Eucgr.E01325 Eucalyptus grandis HOM05D006419 ORTHO05D008096 3.8e-24 114.4 73 75.3
CAN.G170.61 Capsicum annuum HOM05D006419 ORTHO05D008096 4.9e-24 114.0 83 66.3
Ciclev10023026m.g Citrus clementina HOM05D006419 ORTHO05D008096 4.9e-24 114.0 73 76.7
MELO3C022522.2 Cucumis melo HOM05D006419 ORTHO05D008096 6.4e-24 113.6 73 76.7
Potri.014G078200 Populus trichocarpa HOM05D006419 ORTHO05D008096 6.4e-24 113.6 73 78.1
Glyma.03G018600 Glycine max HOM05D006419 ORTHO05D008096 1.9e-23 112.1 73 76.7
TAR636G0701 Trochodendron aralioides HOM05D006419 ORTHO05D008096 5.4e-23 110.5 73 74.0
PSO478G5220 Papaver somniferum HOM05D006419 ORTHO05D008096 1.6e-22 109.0 73 74.0
PSO782G1455 Papaver somniferum HOM05D006419 ORTHO05D008096 4.6e-22 107.5 73 71.2
SGA_v2.0_scaffold486G52389 Striga asiatica HOM05D006419 ORTHO05D008096 4.6e-22 107.5 71 77.5
TAR375G0946 Trochodendron aralioides HOM05D006419 ORTHO05D008096 6.0e-22 107.1 73 75.3
CsaV3_6G005910 Cucumis sativus L. HOM05D006419 ORTHO05D008096 7.8e-22 106.7 71 73.2
SalBow8G2260 Salvia bowleyana HOM05D006419 ORTHO05D008096 1.3e-21 105.9 65 81.5
VMungo0331G1339 Vigna mungo HOM05D006419 ORTHO05D008096 2.3e-21 105.1 99 58.6
unitig_37.g12884 Utricularia gibba HOM05D006419 ORTHO05D008096 5.6e-20 100.5 64 76.6
ATR0757G048 Amborella trichopoda HOM05D006419 ORTHO05D008096 1.3e-19 99.4 73 63.0
CDE11G0029 Ceratophyllum demersum HOM05D006419 ORTHO05D008096 3.6e-19 97.8 73 61.6
vmacro13347 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 6.2e-19 97.1 77 64.9
Mapoly0004s0131 Marchantia polymorpha HOM05D006419 ORTHO05D008096 1.1e-18 96.3 73 64.4
vmacro20977 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 1.4e-18 95.9 73 64.4
Pp3c15_11080 Physcomitrium patens HOM05D006419 ORTHO05D008096 1.2e-17 92.8 73 61.6
Ah.15g094110 Amaranthus hybridus HOM05D006419 ORTHO05D008096 5.8e-17 90.5 56 78.6
AagrBONN_evm.TU.Sc2ySwM_228.3881 Anthoceros agrestis HOM05D006419 ORTHO05D008096 4.9e-16 87.4 73 54.8
Cre10.g426000 Chlamydomonas reinhardtii HOM05D006419 ORTHO05D008096 4.2e-15 84.3 73 49.3
HPP92_022119 Vanilla planifolia HOM05D006419 ORTHO05D008096 9.3e-15 83.2 66 60.6
CSS0035991 Camellia sinensis var. sinensis HOM05D006419 ORTHO05D008096 1.2e-14 82.8 55 72.7
SEGI_03184 Sequoiadendron giganteum HOM05D006419 ORTHO05D008096 2.7e-14 81.6 71 54.9
Zm00001eb320180 Zea mays HOM05D006419 ORTHO05D008096 1.8e-13 79.0 63 63.5
BraA04t18857Z Brassica rapa HOM05D006419 ORTHO05D008096 3.0e-13 78.2 45 80.0
SMO367G0935 Selaginella moellendorffii HOM05D006419 ORTHO05D008096 2.5e-12 75.1 65 55.4
Carub.0005s2776 Capsella rubella HOM05D006419 ORTHO05D008096 5.6e-12 73.9 37 91.9
PRCOL_00003278 Prasinoderma coloniale HOM05D006419 ORTHO05D008096 1.3e-11 72.8 73 47.9
FAN19G0283 Fragaria x ananassa HOM05D006419 ORTHO05D008096 3.7e-11 71.2 37 83.8
FAN28G0164 Fragaria x ananassa HOM05D006419 ORTHO05D008096 8.1e-11 70.1 37 81.1
PSO782G2080 Papaver somniferum HOM05D006419 ORTHO05D008096 1.4e-10 69.3 36 83.3
FAN23G1662 Fragaria x ananassa HOM05D006419 ORTHO05D008096 5.3e-10 67.4 36 80.6
Haze_27740 Corylus avellana HOM05D006419 ORTHO05D008096 2.0e-09 65.5 74 40.5
FAN28G1401 Fragaria x ananassa HOM05D006419 ORTHO05D008096 6.0e-06 53.9 33 69.7
Dinv28502 Davidia involucrata HOM05D000001 ORTHO05D000003 7.9e-06 53.5 45 55.6


User provided reference genes

Program Settings