Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 7.4e-71 271.2 228 100.0
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 2.2e-59 233.0 230 87.0
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 6.5e-59 231.5 228 93.0
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 2.0e-55 219.9 228 85.5
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 1.6e-52 210.3 228 90.8
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 3.2e-50 202.6 228 90.8
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 7.2e-50 201.4 228 89.9
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 2.7e-49 199.5 229 90.0
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 8.8e-48 194.5 228 85.1
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 8.8e-48 194.5 228 85.1
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 8.8e-48 194.5 228 85.1
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 1.5e-39 167.2 188 94.1
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 1.4e-32 144.1 209 72.7
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 1.8e-32 143.7 229 66.8
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 4.4e-31 139.0 206 67.0
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 2.2e-30 136.7 225 66.2
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 2.9e-30 136.3 225 65.8
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 3.7e-30 136.0 213 67.6
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 1.4e-29 134.0 230 62.2
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 1.4e-29 134.0 226 62.4
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 4.1e-29 132.5 225 64.9
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 7.0e-29 131.7 228 61.4
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 4.6e-28 129.0 215 63.7
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 5.9e-28 128.6 216 64.4
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 1.7e-27 127.1 230 61.7
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 2.3e-27 126.7 228 61.0
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 2.3e-27 126.7 181 70.7
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 5.0e-27 125.6 209 65.6
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 5.0e-27 125.6 224 63.4
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 5.0e-27 125.6 228 60.5
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 1.1e-26 124.4 226 63.3
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 1.1e-26 124.4 234 59.0
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 1.9e-26 123.6 227 61.7
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 1.9e-26 123.6 231 61.5
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 2.5e-26 123.2 229 62.0
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 3.3e-26 122.9 224 59.8
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 4.3e-26 122.5 223 63.2
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 4.3e-26 122.5 200 66.0
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 5.6e-26 122.1 228 61.8
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 1.6e-25 120.6 225 63.6
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 2.1e-25 120.2 210 65.2
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 3.6e-25 119.4 250 56.4
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 4.7e-25 119.0 210 61.9
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 1.0e-24 117.9 172 73.3
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 1.4e-24 117.5 211 64.0
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 1.4e-24 117.5 226 61.5
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 1.8e-24 117.1 207 62.3
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 2.3e-24 116.7 216 59.3
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 2.3e-24 116.7 228 57.5
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 4.0e-24 115.9 234 59.4
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 5.2e-24 115.5 225 60.4
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 8.9e-24 114.8 169 68.6
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 1.2e-23 114.4 223 61.0
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 1.5e-23 114.0 231 57.6
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 2.0e-23 113.6 167 73.1
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 3.4e-23 112.8 228 61.0
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 7.5e-23 111.7 176 69.9
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 7.5e-23 111.7 205 60.0
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 7.5e-23 111.7 225 58.2
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 9.8e-23 111.3 228 59.6
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 1.3e-22 110.9 218 53.2
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 2.2e-22 110.2 233 57.1
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 4.9e-22 109.0 229 61.1
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 4.9e-22 109.0 181 67.4
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 4.9e-22 109.0 177 66.1
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 8.3e-22 108.2 186 67.7
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 1.1e-21 107.8 232 57.8
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 1.4e-21 107.5 217 59.0
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 2.4e-21 106.7 207 63.3
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 3.2e-21 106.3 170 73.5
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 5.4e-21 105.5 170 67.6
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 7.0e-21 105.1 171 71.9
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.2e-20 104.4 246 52.8
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.6e-20 104.0 177 63.8
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 1.6e-20 104.0 224 52.2
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 2.0e-20 103.6 170 72.9
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 2.7e-20 103.2 173 69.4
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 6.0e-20 102.1 179 63.1
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 7.8e-20 101.7 225 56.0
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 1.3e-19 100.9 175 74.3
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 1.3e-19 100.9 167 70.1
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 1.7e-19 100.5 173 67.6
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.9e-19 99.4 225 55.6
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 3.3e-18 96.3 149 73.8
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 4.3e-18 95.9 225 55.6
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 5.6e-18 95.5 171 66.1
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 2.8e-17 93.2 181 60.8
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 4.7e-17 92.4 207 59.9
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 2.3e-16 90.1 102 53.9
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 8.9e-16 88.2 196 63.8
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 1.2e-15 87.8 171 66.1
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 1.2e-15 87.8 180 75.6
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 2.6e-15 86.7 233 48.1
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 3.4e-15 86.3 59 71.2
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 4.4e-15 85.9 53 81.1
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 9.8e-15 84.7 102 52.0
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 4.9e-14 82.4 145 71.7
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 4.9e-14 82.4 107 48.6
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 6.4e-14 82.0 143 72.7
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 6.4e-14 82.0 171 56.7
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.9e-13 80.5 207 54.6
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 1.6e-12 77.4 103 49.5
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 2.1e-12 77.0 174 77.0
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 4.6e-12 75.9 108 50.0
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 1.3e-11 74.3 51 72.5
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 1.3e-11 74.3 39 92.3
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 8.6e-11 71.6 148 66.9
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 1.9e-10 70.5 51 72.5
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 2.5e-10 70.1 37 89.2
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 2.8e-09 66.6 98 44.9
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 2.0e-07 60.5 31 93.5
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 3.7e-06 56.2 38 71.1


User provided reference genes

Program Settings