Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G43020 Arabidopsis lyrata HOM05D004013 ORTHO05D004710 9.6e-275 949.5 468 100.0
AT2G44140 Arabidopsis thaliana HOM05D004013 ORTHO05D004710 1.5e-264 915.6 468 95.5
Sp4g26220 Schrenkiella parvula HOM05D004013 ORTHO05D004710 1.2e-240 836.3 471 87.3
Aa31LG1G25800 Aethionema arabicum HOM05D004013 ORTHO05D004710 5.3e-225 784.3 476 82.1
CARHR139300 Cardamine hirsuta HOM05D004013 ORTHO05D004710 3.3e-214 748.4 420 86.2
BcaB02g08917 Brassica carinata HOM05D004013 ORTHO05D004710 4.4e-211 738.0 475 78.7
Carub.0004s2669 Capsella rubella HOM05D004013 ORTHO05D004710 3.1e-209 731.9 385 90.6
Sp5g03230 Schrenkiella parvula HOM05D004013 ORTHO05D004710 6.1e-205 717.6 475 75.6
AL5G42130 Arabidopsis lyrata HOM05D004013 ORTHO05D004710 6.4e-202 707.6 477 74.4
AT3G59950 Arabidopsis thaliana HOM05D004013 ORTHO05D004710 6.0e-200 701.0 481 73.2
Carub.0005s2667 Capsella rubella HOM05D004013 ORTHO05D004710 1.6e-197 693.0 444 77.3
A05p04250 Brassica napus HOM05D004013 ORTHO05D004710 3.6e-197 691.8 477 76.1
BcaC02g12335 Brassica carinata HOM05D004013 ORTHO05D004710 8.0e-197 690.6 475 75.8
C04p05030 Brassica napus HOM05D004013 ORTHO05D004710 8.0e-197 690.6 475 75.8
BolC4t22136H Brassica oleracea HOM05D004013 ORTHO05D004710 8.0e-197 690.6 475 75.8
BraA05t19410Z Brassica rapa HOM05D004013 ORTHO05D004710 8.0e-197 690.6 477 75.9
Thhalv10001432m.g Eutrema salsugineum HOM05D004013 ORTHO05D004710 3.7e-186 655.2 387 83.7
CARHR170260 Cardamine hirsuta HOM05D004013 ORTHO05D004710 1.4e-185 653.3 420 77.4
BraA09t40658Z Brassica rapa HOM05D004013 ORTHO05D004710 3.2e-185 652.1 474 69.0
BcaC07g40400 Brassica carinata HOM05D004013 ORTHO05D004710 3.5e-184 648.7 474 68.6
A09p52290 Brassica napus HOM05D004013 ORTHO05D004710 4.7e-181 638.3 499 65.5
C04p32840 Brassica napus HOM05D004013 ORTHO05D004710 8.9e-180 634.0 475 67.6
BcaC02g10096 Brassica carinata HOM05D004013 ORTHO05D004710 2.0e-179 632.9 475 67.6
BolC4t24846H Brassica oleracea HOM05D004013 ORTHO05D004710 2.0e-179 632.9 475 67.6
Thhalv10005940m.g Eutrema salsugineum HOM05D004013 ORTHO05D004710 2.2e-178 629.4 390 79.0
BolC8t51099H Brassica oleracea HOM05D004013 ORTHO05D004710 1.2e-176 623.6 483 67.3
A04p01980 Brassica napus HOM05D004013 ORTHO05D004710 1.9e-174 616.3 476 66.6
BraA04t15923Z Brassica rapa HOM05D004013 ORTHO05D004710 3.3e-174 615.5 475 66.9
BcaB02g08204 Brassica carinata HOM05D004013 ORTHO05D004710 4.3e-174 615.1 391 76.7
BcaC07g40539 Brassica carinata HOM05D004013 ORTHO05D004710 4.3e-166 588.6 389 74.3
Gohir.D12G001900 Gossypium hirsutum HOM05D004013 ORTHO05D004710 4.3e-166 588.6 468 63.2
Thecc.01G234100 Theobroma cacao HOM05D004013 ORTHO05D004710 5.6e-166 588.2 466 62.4
Gorai.008G001300 Gossypium raimondii HOM05D004013 ORTHO05D004710 7.3e-166 587.8 468 63.0
Lj1g0014615 Lotus japonicus HOM05D004013 ORTHO05D004710 1.4e-164 583.6 488 59.4
Gohir.A12G002200 Gossypium hirsutum HOM05D004013 ORTHO05D004710 3.1e-164 582.4 491 60.7
Prupe.2G000200 Prunus persica HOM05D004013 ORTHO05D004710 5.3e-164 581.6 490 59.6
Ca_08048_v3 Cicer arietinum L. HOM05D004013 ORTHO05D004710 1.5e-163 580.1 489 59.5
Ca_08054_v3 Cicer arietinum L. HOM05D004013 ORTHO05D004710 1.5e-163 580.1 489 59.5
Glyma.09G244800 Glycine max HOM05D004013 ORTHO05D004710 2.6e-163 579.3 489 59.7
Atru.chr3.2025 Acer truncatum HOM05D004013 ORTHO05D004710 5.8e-163 578.2 488 60.5
Dinv28066 Davidia involucrata HOM05D004013 ORTHO05D004710 7.6e-163 577.8 488 60.0
Cfa000589 Carpinus fangiana HOM05D004013 ORTHO05D004710 1.7e-162 576.6 479 60.3
Duzib147G1378 Durio zibethinus HOM05D004013 ORTHO05D004710 1.7e-162 576.6 487 59.5
QL05p046231 Quercus lobata HOM05D004013 ORTHO05D004710 2.9e-162 575.9 501 57.9
MD00G1055200 Malus domestica HOM05D004013 ORTHO05D004710 3.8e-162 575.5 490 59.0
COL.COLO4_06916 Corchorus olitorius HOM05D004013 ORTHO05D004710 4.9e-162 575.1 474 61.6
Phvul.008G048900 Phaseolus vulgaris HOM05D004013 ORTHO05D004710 1.1e-161 573.9 489 58.9
GSVIVG01003913001 Vitis vinifera HOM05D004013 ORTHO05D004710 1.4e-161 573.5 468 61.3
MD07G1000400 Malus domestica HOM05D004013 ORTHO05D004710 2.4e-161 572.8 490 59.0
Medtr7g081230 Medicago truncatula HOM05D004013 ORTHO05D004710 3.2e-161 572.4 487 58.9
VMungo1383G0353 Vigna mungo HOM05D004013 ORTHO05D004710 5.4e-161 571.6 489 58.7
Duzib264G0158 Durio zibethinus HOM05D004013 ORTHO05D004710 9.3e-161 570.9 465 61.7
Potri.007G147100 Populus trichocarpa HOM05D004013 ORTHO05D004710 4.6e-160 568.5 473 61.3
TPR.G29111 Trifolium pratense HOM05D004013 ORTHO05D004710 4.6e-160 568.5 489 58.7
arahy.Tifrunner.gnm1.ann1.LVD0DC Arachis hypogaea HOM05D004013 ORTHO05D004710 3.3e-158 562.4 488 58.0
arahy.Tifrunner.gnm1.ann1.M4STP7 Arachis hypogaea HOM05D004013 ORTHO05D004710 3.3e-158 562.4 488 57.6
Ciclev10019906m.g Citrus clementina HOM05D004013 ORTHO05D004710 3.3e-158 562.4 488 59.2
Cpa.g.sc9.235 Carica papaya HOM05D004013 ORTHO05D004710 4.8e-157 558.5 405 67.4
Eucgr.K03157 Eucalyptus grandis HOM05D004013 ORTHO05D004710 4.8e-157 558.5 490 59.6
arahy.Tifrunner.gnm1.ann1.ERJ0Z2 Arachis hypogaea HOM05D004013 ORTHO05D004710 6.2e-157 558.1 499 57.1
Potri.017G000500 Populus trichocarpa HOM05D004013 ORTHO05D004710 1.4e-156 557.0 484 58.9
MELO3C008520.2 Cucumis melo HOM05D004013 ORTHO05D004710 1.8e-156 556.6 476 59.0
Sed0016347 Sechium edule HOM05D004013 ORTHO05D004710 7.6e-155 551.2 476 59.0
CiPaw.10G057600 Carya illinoinensis HOM05D004013 ORTHO05D004710 1.0e-154 550.8 466 59.4
CSS0003826 Camellia sinensis var. sinensis HOM05D004013 ORTHO05D004710 2.9e-154 549.3 458 59.6
Hma1.2p1_0940F.1_g239620 Hydrangea macrophylla HOM05D004013 ORTHO05D004710 2.9e-154 549.3 490 57.8
TWI63G0479 Tripterygium wilfordii HOM05D004013 ORTHO05D004710 6.4e-154 548.1 446 60.8
CSS0048139 Camellia sinensis var. sinensis HOM05D004013 ORTHO05D004710 8.4e-154 547.7 458 59.4
Glyma.18G248400 Glycine max HOM05D004013 ORTHO05D004710 8.4e-154 547.7 487 57.5
CsaV3_2G011360 Cucumis sativus L. HOM05D004013 ORTHO05D004710 1.1e-153 547.4 476 58.4
Lalb_Chr01g0021691 Lupinus albus HOM05D004013 ORTHO05D004710 4.2e-153 545.4 462 58.7
TAR365G0341 Trochodendron aralioides HOM05D004013 ORTHO05D004710 1.6e-152 543.5 476 59.0
vmacro09116 Vaccinium macrocarpon HOM05D004013 ORTHO05D004710 1.0e-151 540.8 476 59.0
TAR633G1686 Trochodendron aralioides HOM05D004013 ORTHO05D004710 1.8e-151 540.0 496 57.3
TWI15G0551 Tripterygium wilfordii HOM05D004013 ORTHO05D004710 4.3e-150 535.4 446 59.6
Manes.01G009000 Manihot esculenta HOM05D004013 ORTHO05D004710 1.6e-149 533.5 398 64.3
PSO675G0050 Papaver somniferum HOM05D004013 ORTHO05D004710 2.8e-149 532.7 462 59.3
CANSAT78G0639 Cannabis sativa HOM05D004013 ORTHO05D004710 4.8e-149 531.9 440 59.1
ECA232G0201 Erigeron canadensis HOM05D004013 ORTHO05D004710 6.2e-149 531.6 467 58.5
Lj3C865T7 Lonicera japonica HOM05D004013 ORTHO05D004710 6.2e-149 531.6 482 56.6
CiPaw.09G068100 Carya illinoinensis HOM05D004013 ORTHO05D004710 1.1e-148 530.8 399 64.4
Psat0s3112g0040 Pisum sativum HOM05D004013 ORTHO05D004710 1.1e-148 530.8 484 54.5
arahy.Tifrunner.gnm1.ann1.AL59ZJ Arachis hypogaea HOM05D004013 ORTHO05D004710 6.9e-148 528.1 487 55.4
PSO732G0206 Papaver somniferum HOM05D004013 ORTHO05D004710 9.0e-148 527.7 408 63.0
ECA233G0032 Erigeron canadensis HOM05D004013 ORTHO05D004710 5.8e-147 525.0 467 56.7
Lalb_Chr03g0040611 Lupinus albus HOM05D004013 ORTHO05D004710 3.2e-145 519.2 460 56.5
THA.LOC104808419 Tarenaya hassleriana HOM05D004013 ORTHO05D004710 3.2e-145 519.2 312 80.4
PGR142G2472 Punica granatum HOM05D004013 ORTHO05D004710 4.2e-145 518.8 446 59.4
Lj6A740G51 Lonicera japonica HOM05D004013 ORTHO05D004710 5.5e-145 518.5 493 55.8
Lsat_1_v5_gn_8_45601 Lactuca sativa HOM05D004013 ORTHO05D004710 1.6e-144 516.9 466 56.9
Nn1g09391 Nelumbo nucifera HOM05D004013 ORTHO05D004710 2.7e-144 516.2 439 59.5
Rhsim09G0091900 Rhododendron simsii HOM05D004013 ORTHO05D004710 3.9e-143 512.3 544 52.0
HanXRQChr08g0212421 Helianthus annuus HOM05D004013 ORTHO05D004710 2.5e-142 509.6 394 63.5
CDE04G0030 Ceratophyllum demersum HOM05D004013 ORTHO05D004710 1.1e-140 504.2 447 57.9
HanXRQChr12g0363401 Helianthus annuus HOM05D004013 ORTHO05D004710 1.1e-140 504.2 386 63.0
DCAR_023584 Daucus carota HOM05D004013 ORTHO05D004710 1.4e-140 503.8 459 55.8
Ah.07g203370 Amaranthus hybridus HOM05D004013 ORTHO05D004710 5.9e-139 498.4 494 54.9
Hund22667 Selenicereus undatus HOM05D004013 ORTHO05D004710 1.0e-138 497.7 459 56.2
AUR62002510 Chenopodium quinoa HOM05D004013 ORTHO05D004710 2.2e-138 496.5 464 55.8
FAN20G2928 Fragaria x ananassa HOM05D004013 ORTHO05D004710 2.5e-137 493.0 417 60.0
Oeu011024.1 Olea europaea HOM05D004013 ORTHO05D004710 9.4e-137 491.1 395 60.8
CDE06G1594 Ceratophyllum demersum HOM05D004013 ORTHO05D004710 1.2e-136 490.7 447 55.7
FvH4_2g06800 Fragaria vesca HOM05D004013 ORTHO05D004710 1.2e-136 490.7 418 60.3
ATR0706G248 Amborella trichopoda HOM05D004013 ORTHO05D004710 6.1e-136 488.4 496 52.4
FAN24G3388 Fragaria x ananassa HOM05D004013 ORTHO05D004710 7.9e-136 488.0 416 59.6
FAN27G1923 Fragaria x ananassa HOM05D004013 ORTHO05D004710 1.8e-135 486.9 418 60.0
FAN15G0687 Fragaria x ananassa HOM05D004013 ORTHO05D004710 2.3e-135 486.5 400 61.0
AUR62023683 Chenopodium quinoa HOM05D004013 ORTHO05D004710 6.7e-135 485.0 398 60.6
Nitab4.5_0001568g0070 Nicotiana tabacum HOM05D004013 ORTHO05D004710 2.0e-134 483.4 406 58.1
CAN.G140.48 Capsicum annuum HOM05D004013 ORTHO05D004710 3.3e-134 482.6 489 52.1
Sopen01g002230 Solanum pennellii HOM05D004013 ORTHO05D004710 4.3e-134 482.3 484 51.2
PGSC0003DMG400032144 Solanum tuberosum HOM05D004013 ORTHO05D004710 4.3e-134 482.3 487 50.7
Solyc01g006230.3 Solanum lycopersicum HOM05D004013 ORTHO05D004710 9.7e-134 481.1 484 51.0
MSTRG.23493 Avicennia marina HOM05D004013 ORTHO05D004710 1.7e-133 480.3 502 52.0
EL10Ac3g06192 Beta vulgaris HOM05D004013 ORTHO05D004710 1.7e-133 480.3 483 53.0
Nitab4.5_0005132g0050 Nicotiana tabacum HOM05D004013 ORTHO05D004710 1.7e-133 480.3 406 58.4
RcHm_v2.0_Chr6g0259021 Rosa chinensis HOM05D004013 ORTHO05D004710 2.2e-133 479.9 414 59.9
Haze_06261 Corylus avellana HOM05D004013 ORTHO05D004710 4.8e-133 478.8 719 40.3
MBI15_g08971_MAGBIO Magnolia biondii HOM05D004013 ORTHO05D004710 3.1e-132 476.1 415 56.9
Ah.13g073110 Amaranthus hybridus HOM05D004013 ORTHO05D004710 1.2e-131 474.2 390 60.0
Migut.L00278 Erythranthe guttata HOM05D004013 ORTHO05D004710 4.5e-131 472.2 501 50.5
SHI01175 Sapria himalayana HOM05D004013 ORTHO05D004710 5.9e-131 471.9 486 53.1
Migut.L00578 Erythranthe guttata HOM05D004013 ORTHO05D004710 8.5e-130 468.0 389 58.1
Os04g0682000 Oryza sativa ssp. japonica HOM05D004013 ORTHO05D004710 1.4e-129 467.2 484 50.6
CSS0004368 Camellia sinensis var. sinensis HOM05D004013 ORTHO05D004710 1.9e-129 466.8 428 56.1
SGA_v2.0_scaffold37G14795 Striga asiatica HOM05D004013 ORTHO05D004710 3.2e-129 466.1 385 59.0
SGA_v2.0_scaffold3G01797 Striga asiatica HOM05D004013 ORTHO05D004710 2.1e-128 463.4 483 52.8
SalBow7G0073 Salvia bowleyana HOM05D004013 ORTHO05D004710 2.7e-128 463.0 504 50.0
DCAR_026793 Daucus carota HOM05D004013 ORTHO05D004710 6.1e-128 461.8 399 57.4
Os03g0391000 Oryza sativa ssp. japonica HOM05D004013 ORTHO05D004710 1.0e-127 461.1 472 51.5
vmacro10687 Vaccinium macrocarpon HOM05D004013 ORTHO05D004710 6.7e-127 458.4 547 48.3
Zm00001eb065800 Zea mays HOM05D004013 ORTHO05D004710 8.2e-125 451.4 477 51.8
SEGI_37986 Sequoiadendron giganteum HOM05D004013 ORTHO05D004710 5.3e-124 448.7 455 52.1
unitig_748.g8760 Utricularia gibba HOM05D004013 ORTHO05D004710 1.5e-123 447.2 424 54.0
HPP92_020809 Vanilla planifolia HOM05D004013 ORTHO05D004710 4.5e-123 445.7 494 49.4
Sed0011939 Sechium edule HOM05D004013 ORTHO05D004710 2.3e-119 433.3 364 60.4
ClCG06G010000 Citrullus lanatus HOM05D004013 ORTHO05D004710 6.7e-119 431.8 361 60.4
Oeu034368.2 Olea europaea HOM05D004013 ORTHO05D004710 2.6e-118 429.9 601 41.6
Pp3c11_22820 Physcomitrium patens HOM05D004013 ORTHO05D004710 3.3e-118 429.5 388 54.9
Zm00001eb433950 Zea mays HOM05D004013 ORTHO05D004710 1.7e-117 427.2 368 57.3
Dinv18636 Davidia involucrata HOM05D004013 ORTHO05D004710 1.6e-115 420.6 317 64.0
Pp3c7_280 Physcomitrium patens HOM05D004013 ORTHO05D004710 2.1e-112 410.2 388 51.8
Sc08g0007990 Simmondsia chinensis HOM05D004013 ORTHO05D004710 4.7e-112 409.1 376 57.4
Peaxi162Scf00441g00621 Petunia axillaris HOM05D004013 ORTHO05D004710 1.8e-111 407.1 394 52.5
Mapoly0153s0038 Marchantia polymorpha HOM05D004013 ORTHO05D004710 5.4e-108 395.6 402 49.5
SMO145G0104 Selaginella moellendorffii HOM05D004013 ORTHO05D004710 2.5e-105 386.7 375 53.3
C08p34940 Brassica napus HOM05D004013 ORTHO05D004710 1.1e-89 334.7 206 78.2
Actinidia29462 Actinidia chinensis HOM05D004013 ORTHO05D004710 7.1e-76 288.9 218 63.3
Oeu053147.1 Olea europaea HOM05D004013 ORTHO05D004710 3.5e-75 286.6 330 46.1
Zm00001eb419970 Zea mays HOM05D004013 ORTHO05D004710 1.2e-70 271.6 244 57.8
Sabra17G0005400 Salix brachista HOM05D004013 ORTHO05D004710 3.0e-66 256.9 281 51.2
Hma1.2p1_1910F.1_g307280 Hydrangea macrophylla HOM05D004013 ORTHO05D004710 7.3e-65 252.3 276 48.9
Actinidia29461 Actinidia chinensis HOM05D004013 ORTHO05D004710 1.5e-62 244.6 223 57.4
CBR_g21952 Chara braunii HOM05D004013 ORTHO05D004710 5.4e-60 236.1 310 43.2
Zm00001eb264230 Zea mays HOM05D004013 ORTHO05D004710 7.3e-57 225.7 236 50.4
C08p34950 Brassica napus HOM05D004013 ORTHO05D004710 1.9e-49 201.1 211 53.1
Actinidia36638 Actinidia chinensis HOM05D004013 ORTHO05D004710 2.4e-47 194.1 412 35.4
PRCOL_00001711 Prasinoderma coloniale HOM05D004013 ORTHO05D004710 1.7e-45 188.0 430 32.1
Oeu037862.1 Olea europaea HOM05D004013 ORTHO05D004710 8.4e-45 185.7 295 39.0
THA.LOC104804900 Tarenaya hassleriana HOM05D004013 ORTHO05D004710 6.7e-42 176.0 197 53.8
unitig_32.g11897 Utricularia gibba HOM05D004013 ORTHO05D004710 2.7e-35 154.1 258 39.1
MCO13G568 Micromonas commoda HOM05D004013 ORTHO05D004710 1.2e-30 138.7 285 33.0
ClCG06G009970 Citrullus lanatus HOM05D004013 ORTHO05D004710 3.0e-26 124.0 93 60.2
arahy.Tifrunner.gnm1.ann1.MVA4LE Arachis hypogaea HOM05D004013 ORTHO05D004710 5.7e-25 119.8 121 53.7
Peaxi162Scf00271g00518 Petunia axillaris HOM05D004013 ORTHO05D004710 1.8e-23 114.8 117 50.4
Actinidia03474 Actinidia chinensis HOM05D004013 ORTHO05D004710 9.0e-23 112.5 128 46.1
Cre12.g510100 Chlamydomonas reinhardtii HOM05D004013 ORTHO05D004710 1.7e-21 108.2 214 32.7
arahy.Tifrunner.gnm1.ann1.AC7664 Arachis hypogaea HOM05D004013 ORTHO05D004710 1.1e-17 95.5 102 52.0
Actinidia03477 Actinidia chinensis HOM05D004013 ORTHO05D004710 1.7e-16 91.7 113 48.7
ATR0807G232 Amborella trichopoda HOM05D004013 ORTHO05D004710 2.1e-11 74.7 47 61.7
Cfa022146 Carpinus fangiana HOM05D004013 ORTHO05D124891 2.1e-11 74.7 364 26.4
ATR0807G053 Amborella trichopoda HOM05D004013 ORTHO05D004710 9.1e-07 59.3 45 60.0
CBR_g50173 Chara braunii HOM05D004013 ORTHO05D004710 2.0e-06 58.2 42 59.5


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