Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 4.0e-293 1010.7 532 100.0
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 1.8e-261 905.6 532 90.2
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 2.2e-238 828.9 529 83.7
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 5.1e-232 807.7 541 81.1
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 4.8e-230 801.2 543 80.5
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 5.0e-187 658.3 551 69.9
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 7.0e-181 637.9 541 70.4
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 3.5e-180 635.6 572 67.8
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 7.8e-180 634.4 591 65.8
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 1.6e-172 610.1 456 74.6
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 3.5e-148 529.3 477 68.6
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 5.1e-147 525.4 559 58.0
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 5.1e-115 419.1 537 48.6
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 8.8e-115 418.3 537 48.8
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 4.3e-114 416.0 537 48.6
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 8.2e-113 411.8 550 49.3
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 5.0e-110 402.5 559 45.1
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 1.4e-109 401.0 568 46.5
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 2.5e-109 400.2 534 46.8
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 9.4e-109 398.3 550 48.5
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 2.7e-108 396.7 552 47.5
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 2.3e-107 393.7 550 46.9
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 3.9e-107 392.9 545 47.0
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 2.0e-106 390.6 554 47.3
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 1.3e-105 387.9 538 45.4
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 3.7e-105 386.3 550 45.3
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 8.2e-105 385.2 564 45.7
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.7e-102 377.5 549 45.2
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 2.2e-102 377.1 544 46.0
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 6.5e-102 375.6 557 44.7
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.5e-101 374.4 544 45.8
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 1.5e-101 374.4 547 45.0
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 7.2e-101 372.1 582 42.8
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 7.2e-101 372.1 560 44.5
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 8.0e-100 368.6 544 45.8
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 1.8e-99 367.5 538 43.7
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 9.7e-98 361.7 539 44.7
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 8.2e-97 358.6 512 46.3
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.1e-96 358.2 592 41.6
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 4.1e-96 356.3 585 41.9
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 7.7e-95 352.1 548 43.1
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 3.8e-94 349.7 535 45.0
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 3.8e-94 349.7 600 42.0
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 8.5e-94 348.6 542 43.5
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 7.2e-93 345.5 593 40.6
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 1.2e-92 344.7 547 42.8
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 1.6e-92 344.4 551 44.6
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 2.1e-92 344.0 547 43.5
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 3.6e-92 343.2 547 41.5
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 8.0e-92 342.0 546 42.1
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 8.0e-92 342.0 531 42.6
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 1.8e-91 340.9 539 43.0
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 2.3e-91 340.5 472 46.0
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 5.2e-91 339.3 536 43.5
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 1.2e-90 338.2 537 41.9
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 1.3e-89 334.7 540 42.8
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 2.4e-88 330.5 608 39.8
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 9.1e-88 328.6 544 41.5
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 9.1e-88 328.6 590 39.8
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 7.7e-87 325.5 538 40.9
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 8.5e-86 322.0 563 40.1
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 2.5e-85 320.5 524 40.8
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 4.7e-84 316.2 534 38.8
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 4.7e-84 316.2 658 38.6
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 6.1e-84 315.8 605 38.8
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 3.0e-83 313.5 551 40.5
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 1.2e-82 311.6 619 39.4
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 1.5e-77 294.7 539 38.6
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 7.3e-77 292.4 554 38.4
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 5.7e-74 282.7 560 35.7
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 2.0e-71 274.2 548 39.1
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 4.6e-71 273.1 524 38.5
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 5.9e-71 272.7 541 37.9
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 1.4e-67 261.5 382 46.1
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 1.3e-65 255.0 511 37.2
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 1.1e-64 251.9 450 38.0
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 3.2e-64 250.4 458 38.4
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 6.0e-63 246.1 551 32.8
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 6.2e-60 236.1 448 37.9
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 5.8e-58 229.6 574 35.2
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 3.6e-52 210.3 472 34.5
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 1.1e-40 172.2 128 66.4
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 2.1e-39 167.9 496 28.4
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 5.1e-38 163.3 395 33.2
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 5.3e-35 153.3 547 26.9
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 2.3e-30 137.9 414 34.1
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 1.9e-29 134.8 219 39.7
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 9.0e-27 125.9 462 28.8
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 2.2e-25 121.3 156 47.4
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 2.1e-23 114.8 167 44.3
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 1.0e-22 112.5 341 31.7
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.8e-22 111.7 168 45.2
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.8e-22 111.7 168 45.2
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 1.5e-21 108.6 562 24.0
Lsat_1_v5_gn_5_138981 Lactuca sativa HOM05D007575 ORTHO05D009611 9.6e-21 105.9 350 28.6
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 2.7e-15 87.8 74 59.5
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 3.0e-14 84.3 163 40.5
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 2.1e-07 61.6 750 22.0
MBI08_g05086_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 2.1e-07 61.6 46 67.4
Sc22g0000260 Simmondsia chinensis HOM05D002884 ORTHO05D003178 1.3e-06 58.9 70 37.1
Solyc08g080410.3 Solanum lycopersicum HOM05D002884 ORTHO05D003178 1.8e-06 58.5 70 40.0
Sopen08g028740 Solanum pennellii HOM05D002884 ORTHO05D003178 1.8e-06 58.5 70 40.0
CAN.G981.24 Capsicum annuum HOM05D002884 ORTHO05D003178 2.3e-06 58.2 70 38.6
HPP92_022610 Vanilla planifolia HOM05D002884 ORTHO05D003178 2.3e-06 58.2 72 37.5
PGSC0003DMG400003048 Solanum tuberosum HOM05D002884 ORTHO05D003178 3.0e-06 57.8 77 37.7
Peaxi162Scf00714g00057 Petunia axillaris HOM05D002884 ORTHO05D003178 5.1e-06 57.0 104 29.8
Sabra03G0086200 Salix brachista HOM05D002884 ORTHO05D003178 5.1e-06 57.0 96 33.3
CSS0004594 Camellia sinensis var. sinensis HOM05D002884 ORTHO05D003178 6.7e-06 56.6 106 29.2
MBI04_g00304_MAGBIO Magnolia biondii HOM05D002884 ORTHO05D003178 8.7e-06 56.2 97 30.9


User provided reference genes

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