Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 0.0e+00 1850.9 942 100.0
AT2G36370 Arabidopsis thaliana HOM05D006439 ORTHO05D008152 0.0e+00 1686.8 939 91.2
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 0.0e+00 1439.5 935 80.1
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 0.0e+00 1407.5 958 77.3
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 0.0e+00 1394.8 903 79.2
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 0.0e+00 1385.9 960 76.5
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 0.0e+00 1378.2 997 73.7
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 0.0e+00 1349.7 904 77.4
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 0.0e+00 1347.4 904 77.3
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 0.0e+00 1234.6 783 81.9
Aa31LG5G21550 Aethionema arabicum HOM05D006439 ORTHO05D008152 0.0e+00 1232.6 959 69.0
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 0.0e+00 1186.4 960 64.5
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 8.7e-275 950.7 978 51.5
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 2.9e-262 909.1 978 50.7
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 1.9e-261 906.4 971 50.4
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 2.5e-261 906.0 1008 48.6
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 6.7e-259 897.9 971 49.7
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 1.9e-258 896.3 918 51.5
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 3.3e-258 895.6 977 50.3
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 3.1e-256 889.0 969 49.6
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 3.1e-256 889.0 975 50.1
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 3.4e-255 885.6 966 49.7
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 9.0e-248 860.9 973 48.6
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 6.5e-246 854.7 987 47.4
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 1.6e-244 850.1 969 47.1
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 4.6e-244 848.6 1041 45.9
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 3.3e-242 842.4 948 47.8
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 4.3e-242 842.0 983 46.9
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 8.2e-241 837.8 980 46.3
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 1.8e-240 836.6 983 46.3
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 5.0e-238 828.6 994 45.8
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 1.4e-237 827.0 851 51.7
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 1.2e-236 823.9 1000 45.3
Carub.0004s1817 Capsella rubella HOM05D006439 ORTHO05D008152 5.7e-234 815.1 470 88.9
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 4.8e-233 812.0 961 45.7
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 7.0e-232 808.1 947 46.8
FAN14G3294 Fragaria x ananassa HOM05D006439 ORTHO05D008152 1.0e-230 804.3 993 46.2
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 2.2e-230 803.1 973 44.6
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 5.0e-230 802.0 958 47.8
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 1.1e-229 800.8 947 46.4
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 3.8e-222 775.8 936 46.0
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 1.8e-219 766.9 915 45.5
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 1.1e-216 757.7 939 45.0
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 3.1e-216 756.1 973 44.9
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 1.2e-210 737.6 1009 43.3
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 2.0e-210 736.9 925 44.6
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 1.3e-209 734.2 885 47.0
PSO384G3820 Papaver somniferum HOM05D006439 ORTHO05D008152 1.2e-204 717.6 966 42.5
SGA_v2.0_scaffold184G39949 Striga asiatica HOM05D006439 ORTHO05D008152 4.9e-201 705.7 1051 40.5
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 1.6e-199 700.7 858 46.0
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 1.2e-194 684.5 764 49.7
Oeu034357.1 Olea europaea HOM05D006439 ORTHO05D008152 3.5e-191 672.9 985 41.2
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 3.0e-190 669.8 844 45.1
FvH4_6g18170 Fragaria vesca HOM05D006439 ORTHO05D008152 5.8e-186 655.6 950 40.8
Carub.0004s1816 Capsella rubella HOM05D006439 ORTHO05D008152 3.7e-185 652.9 414 80.7
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 8.3e-185 651.7 888 42.3
Cpa.g.sc5.59 Carica papaya HOM05D006439 ORTHO05D008152 1.7e-182 644.0 960 42.0
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 1.5e-181 641.0 657 52.5
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 5.2e-179 632.5 884 41.5
PGR142G3529 Punica granatum HOM05D006439 ORTHO05D008152 1.5e-178 630.9 800 45.1
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 9.2e-176 621.7 760 46.3
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 6.0e-175 619.0 761 46.4
Ca_08981_v3 Cicer arietinum L. HOM05D006439 ORTHO05D008152 6.6e-174 615.5 803 43.8
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 2.1e-172 610.5 801 43.3
Os01g0968600 Oryza sativa ssp. japonica HOM05D006439 ORTHO05D008152 1.3e-161 574.7 925 37.1
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 3.8e-161 573.2 834 40.5
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 1.5e-157 561.2 677 47.3
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 2.4e-147 527.3 803 39.7
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 3.1e-139 500.4 649 44.8
Aqoxy2G01352 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 1.5e-138 498.0 652 44.2
HPP92_005462 Vanilla planifolia HOM05D006439 ORTHO05D008152 1.3e-137 495.0 983 35.3
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 4.6e-135 486.5 860 36.9
Atru.chr8.1601 Acer truncatum HOM05D006439 ORTHO05D008152 3.7e-132 476.9 485 53.2
PSO801G0048 Papaver somniferum HOM05D006439 ORTHO05D008152 2.2e-121 441.0 767 38.3
Atru.chr8.1600 Acer truncatum HOM05D006439 ORTHO05D008152 7.4e-117 426.0 495 47.5
TAR623G1631 Trochodendron aralioides HOM05D006439 ORTHO05D008152 9.7e-117 425.6 533 47.3
Dinv21235 Davidia involucrata HOM05D000103 ORTHO05D008152 3.8e-105 387.1 425 51.8
Rhsim04G0133900 Rhododendron simsii HOM05D006439 ORTHO05D008152 2.5e-104 384.4 360 55.3
Dinv21234 Davidia involucrata HOM05D006439 ORTHO05D008152 2.2e-100 371.3 421 47.3
Zm00001eb139990 Zea mays HOM05D006439 ORTHO05D008152 9.1e-99 365.9 604 38.6
CSS0038647 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 3.4e-93 347.4 286 59.8
MBI17_g23163_MAGBIO Magnolia biondii HOM05D006439 ORTHO05D008152 7.3e-88 329.7 809 32.6
Pp3c16_1040 Physcomitrium patens HOM05D006439 ORTHO05D008152 5.2e-86 323.6 961 28.2
QL11p044009 Quercus lobata HOM05D006439 ORTHO05D009270 1.8e-83 315.1 532 38.2
Nitab4.5_0005447g0020 Nicotiana tabacum HOM05D006439 ORTHO05D008152 8.1e-71 273.1 480 35.6
Mapoly0116s0006 Marchantia polymorpha HOM05D006439 ORTHO05D008152 1.3e-68 265.8 907 25.2
AL4G34520 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 2.1e-66 258.5 465 42.4
Lj3A1001T30 Lonicera japonica HOM05D006439 ORTHO05D008152 2.1e-66 258.5 247 56.3
AagrBONN_evm.TU.Sc2ySwM_117.1948 Anthoceros agrestis HOM05D006439 ORTHO05D008152 3.5e-66 257.7 893 27.8
SMO238G0046 Selaginella moellendorffii HOM05D006439 ORTHO05D008152 1.9e-59 235.3 869 26.4
VMungo1383G1144 Vigna mungo HOM05D006439 ORTHO05D008152 4.4e-53 214.2 249 43.4
RcHm_v2.0_Chr3g0472501 Rosa chinensis HOM05D006439 ORTHO05D008152 8.4e-52 209.9 181 56.9
Lj3A1001G26 Lonicera japonica HOM05D006439 ORTHO05D008152 1.5e-48 199.1 203 47.3
Ciclev10013912m.g Citrus clementina HOM05D006439 ORTHO05D008152 2.5e-48 198.4 173 56.6
QL07p039868 Quercus lobata HOM05D006439 ORTHO05D008152 3.3e-48 198.0 196 54.1
PGSC0003DMG402008399 Solanum tuberosum HOM05D006439 ORTHO05D008152 5.3e-46 190.7 172 53.5
Lj3A1001T29 Lonicera japonica HOM05D006439 ORTHO05D008152 3.8e-44 184.5 318 37.7
SEGI_26522 Sequoiadendron giganteum HOM05D006439 ORTHO05D000001 9.3e-43 179.9 221 43.9
AL4G34560 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 3.9e-33 147.9 133 62.4
Aqoxy2G01351 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 5.1e-33 147.5 182 40.7
CAN.G1099.8 Capsicum annuum HOM05D006439 ORTHO05D008152 2.3e-25 122.1 132 44.7
Nitab4.5_0000381g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 8.7e-25 120.2 124 47.6
TAR623G0848 Trochodendron aralioides HOM05D006439 ORTHO05D008152 1.1e-24 119.8 163 39.9
SEGI_37059 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.5e-24 119.4 155 41.3
VMungo1127G2301 Vigna mungo HOM05D006439 ORTHO05D008152 6.3e-23 114.0 188 36.2
CSS0030357 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 1.9e-19 102.4 172 40.7
Lj3A1001T31 Lonicera japonica HOM05D006439 ORTHO05D008152 5.5e-19 100.9 98 49.0
SEGI_31112 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 7.2e-19 100.5 290 30.0
Thecc.10G111400 Theobroma cacao HOM05D006439 ORTHO05D008152 9.4e-19 100.1 77 57.1
AUR62028586 Chenopodium quinoa HOM05D006439 ORTHO05D008152 3.9e-17 94.7 96 49.0
FAN09G3024 Fragaria x ananassa HOM05D006439 ORTHO05D008152 6.7e-17 94.0 159 36.5
AL4G34300 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 2.5e-16 92.0 55 87.3
SEGI_02684 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 6.9e-14 84.0 103 41.7
CSS0006664 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 1.1e-11 76.6 91 49.5
SEGI_31670 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 8.8e-09 67.0 113 35.4
Pp3c17_7680 Physcomitrium patens HOM05D000530 ORTHO05D003341 5.7e-08 64.3 341 25.2
AUR62033535 Chenopodium quinoa HOM05D006439 ORTHO05D008152 9.7e-08 63.5 55 58.2
ECA232G2349 Erigeron canadensis HOM05D006439 ORTHO05D008321 4.1e-06 58.2 65 44.6


User provided reference genes

Program Settings