Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G27610 Arabidopsis lyrata HOM05D003806 ORTHO05D004346 2.9e-276 956.1 1334 100.0
AT2G32240 Arabidopsis thaliana HOM05D003806 ORTHO05D004346 3.5e-189 666.8 1335 87.9
CARHR126030 Cardamine hirsuta HOM05D003806 ORTHO05D004346 1.3e-175 621.7 1334 77.4
Carub.0004s1356 Capsella rubella HOM05D003806 ORTHO05D004346 2.9e-159 567.4 1334 83.4
Thhalv10016148m.g Eutrema salsugineum HOM05D003806 ORTHO05D004346 5.0e-143 513.5 1338 76.9
THA.LOC104800972 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 3.9e-111 407.5 1355 58.5
C04p17390 Brassica napus HOM05D003806 ORTHO05D004346 1.6e-101 375.6 1463 60.6
BcaC02g11341 Brassica carinata HOM05D003806 ORTHO05D001704 6.2e-101 373.6 1462 59.0
BolC4t23290H Brassica oleracea HOM05D008171 ORTHO05D006541 1.2e-96 359.4 1454 60.5
BraA05t20242Z Brassica rapa HOM05D003806 ORTHO05D004346 3.8e-90 337.8 1465 59.7
Sp4g14610 Schrenkiella parvula HOM05D003806 ORTHO05D004346 3.8e-90 337.8 1340 59.6
A05p13020 Brassica napus HOM05D003806 ORTHO05D004346 3.9e-87 327.8 1463 60.8
THA.LOC104816049 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 2.2e-82 312.0 1352 42.4
Aa31LG5G4290 Aethionema arabicum HOM05D003806 ORTHO05D004346 5.5e-81 307.4 1336 61.5
AT1G05320 Arabidopsis thaliana HOM05D003806 ORTHO05D004346 1.0e-74 286.6 566 41.3
BcaC01g05916 Brassica carinata HOM05D003806 ORTHO05D004346 1.7e-74 285.8 343 61.5
C03p21110 Brassica napus HOM05D003806 ORTHO05D004346 3.5e-72 278.1 343 65.6
BolC3t14493H Brassica oleracea HOM05D003806 ORTHO05D004346 3.5e-72 278.1 343 65.6
Thecc.01G172500 Theobroma cacao HOM05D003806 ORTHO05D004346 1.9e-70 272.3 622 41.6
Cfa023525 Carpinus fangiana HOM05D003806 ORTHO05D004346 1.3e-69 269.6 1386 40.0
COL.COLO4_33757 Corchorus olitorius HOM05D003806 ORTHO05D004346 2.2e-69 268.9 622 44.1
A03p18080 Brassica napus HOM05D003806 ORTHO05D004346 1.4e-63 249.6 343 58.0
BolC5t29142H Brassica oleracea HOM05D003806 ORTHO05D004346 1.1e-62 246.5 571 41.5
Haze_13639 Corylus avellana HOM05D003806 ORTHO05D004346 6.9e-60 237.3 731 33.9
Duzib133G0409 Durio zibethinus HOM05D003806 ORTHO05D004346 2.2e-58 232.3 622 39.1
RcHm_v2.0_Chr2g0153621 Rosa chinensis HOM05D003806 ORTHO05D004346 3.8e-58 231.5 617 38.9
Dinv09877 Davidia involucrata HOM05D003806 ORTHO05D004346 2.7e-56 225.3 624 31.6
Dinv08951 Davidia involucrata HOM05D003806 ORTHO05D004346 6.1e-56 224.2 533 34.1
Prupe.3G186800 Prunus persica HOM05D003806 ORTHO05D004346 1.4e-55 223.0 1382 40.8
MD17G1128600 Malus domestica HOM05D003806 ORTHO05D004346 1.1e-54 219.9 619 31.5
MD09G1138500 Malus domestica HOM05D003806 ORTHO05D004346 2.0e-54 219.2 618 31.2
Gohir.D07G087100 Gossypium hirsutum HOM05D003806 ORTHO05D004346 3.3e-54 218.4 621 35.7
Carub.0001s0463 Capsella rubella HOM05D003806 ORTHO05D004346 2.8e-53 215.3 576 35.8
BraA03t11067Z Brassica rapa HOM05D003806 ORTHO05D004346 1.8e-52 212.6 343 56.3
C05p03650 Brassica napus HOM05D003806 ORTHO05D004346 2.4e-52 212.2 571 41.9
A10p04030 Brassica napus HOM05D003806 ORTHO05D004346 5.3e-52 211.1 600 38.3
Gorai.001G093100 Gossypium raimondii HOM05D003806 ORTHO05D004346 4.5e-51 208.0 621 35.1
Atru.chr8.989 Acer truncatum HOM05D003806 ORTHO05D004346 5.9e-51 207.6 622 34.6
CiPaw.03G113300 Carya illinoinensis HOM05D003806 ORTHO05D004346 5.9e-51 207.6 604 31.8
Gohir.A07G081500 Gossypium hirsutum HOM05D003806 ORTHO05D004346 7.7e-51 207.2 621 34.1
Manes.09G072900 Manihot esculenta HOM05D003806 ORTHO05D004346 1.0e-50 206.8 624 32.1
GSVIVG01015817001 Vitis vinifera HOM05D003806 ORTHO05D004346 1.5e-49 203.0 658 30.7
Gohir.D11G163300 Gossypium hirsutum HOM05D003806 ORTHO05D004346 4.2e-49 201.4 622 37.0
Gohir.A11G156200 Gossypium hirsutum HOM05D003806 ORTHO05D004346 5.5e-49 201.1 619 39.4
Cpa.g.sc8.294 Carica papaya HOM05D003806 ORTHO05D004346 1.2e-48 199.9 1536 32.0
Gorai.007G174000 Gossypium raimondii HOM05D003806 ORTHO05D004346 3.6e-48 198.4 622 36.7
TWI34G1284 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 1.0e-47 196.8 1380 43.9
FAN09G2907 Fragaria x ananassa HOM05D003806 ORTHO05D004346 1.1e-46 193.4 617 42.1
Duzib138G1777 Durio zibethinus HOM05D003806 ORTHO05D004346 7.5e-46 190.7 621 31.2
Lj1A1039T31 Lonicera japonica HOM05D003806 ORTHO05D004346 1.3e-45 189.9 1378 41.1
BraA10t42674Z Brassica rapa HOM05D003806 ORTHO05D004346 5.3e-44 184.5 584 38.9
TAR626G1670 Trochodendron aralioides HOM05D003806 ORTHO05D004346 5.9e-43 181.0 669 29.4
CARHR004810 Cardamine hirsuta HOM05D003806 ORTHO05D004346 2.9e-42 178.7 339 51.0
TWI60G0662 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 3.8e-42 178.3 1379 42.7
QL04p061548 Quercus lobata HOM05D003806 ORTHO05D004346 5.0e-42 177.9 1386 41.1
MBI02_g35832_MAGBIO Magnolia biondii HOM05D003806 ORTHO05D004346 1.9e-41 176.0 706 29.9
FAN05G0560 Fragaria x ananassa HOM05D003806 ORTHO05D004346 4.2e-41 174.9 617 35.3
Sp1g04190 Schrenkiella parvula HOM05D003806 ORTHO05D004346 1.2e-40 173.3 180 64.4
PGSC0003DMG400011753 Solanum tuberosum HOM05D003806 ORTHO05D004346 1.4e-39 169.9 723 27.7
FvH4_6g39571 Fragaria vesca HOM05D003806 ORTHO05D004346 2.0e-38 166.0 617 34.7
C08p51770 Brassica napus HOM05D003806 ORTHO05D004346 7.5e-38 164.1 333 47.7
Sabra16G0025500 Salix brachista HOM05D003806 ORTHO05D004346 9.8e-38 163.7 1386 37.2
Sabra16G0020700 Salix brachista HOM05D003806 ORTHO05D004346 1.7e-37 162.9 1386 37.1
ClCG07G010910 Citrullus lanatus HOM05D003806 ORTHO05D004346 3.7e-37 161.8 342 44.4
Hma1.2p1_0401F.1_g144710 Hydrangea macrophylla HOM05D003806 ORTHO05D004346 1.8e-36 159.5 625 32.0
Cc05_g00050 Coffea canephora HOM05D003806 ORTHO05D004346 4.1e-36 158.3 616 28.2
Sed0016792 Sechium edule HOM05D003806 ORTHO05D004346 3.5e-35 155.2 344 44.5
AL1G15120 Arabidopsis lyrata HOM05D003806 ORTHO05D004346 5.9e-35 154.5 574 32.2
CsaV3_4G007390 Cucumis sativus L. HOM05D003806 ORTHO05D004346 5.0e-34 151.4 355 41.7
PSO541G2929 Papaver somniferum HOM05D003806 ORTHO05D004346 1.9e-33 149.4 266 38.0
Potri.016G018700 Populus trichocarpa HOM05D003806 ORTHO05D004346 2.5e-33 149.1 614 32.2
Thhalv10006865m.g Eutrema salsugineum HOM05D003806 ORTHO05D004346 3.2e-33 148.7 299 50.8
Glyma.11G096400 Glycine max HOM05D003806 ORTHO05D004346 7.2e-33 147.5 634 32.2
Potri.006G021200 Populus trichocarpa HOM05D003806 ORTHO05D004346 7.2e-33 147.5 613 31.5
BraA09t42077Z Brassica rapa HOM05D003806 ORTHO05D004346 9.4e-33 147.1 584 42.0
Solyc07g043320.3 Solanum lycopersicum HOM05D003806 ORTHO05D004346 1.2e-32 146.7 613 28.2
A09p67490 Brassica napus HOM05D003806 ORTHO05D004346 1.6e-32 146.4 584 43.0
PSO675G3405 Papaver somniferum HOM05D003806 ORTHO05D004346 1.6e-32 146.4 403 35.2
FAN02G2860 Fragaria x ananassa HOM05D003806 ORTHO05D004346 2.1e-32 146.0 630 33.5
Nitab4.5_0000170g0440 Nicotiana tabacum HOM05D003806 ORTHO05D004346 2.3e-31 142.5 613 29.0
BolC8t52706H Brassica oleracea HOM05D003806 ORTHO05D004346 1.2e-30 140.2 319 45.5
CDE05G0051 Ceratophyllum demersum HOM05D003806 ORTHO05D004346 1.5e-30 139.8 498 38.0
Psat7g179080 Pisum sativum HOM05D003806 ORTHO05D004346 7.5e-30 137.5 618 33.7
BcaC09g49104 Brassica carinata HOM05D003806 ORTHO05D004346 9.8e-30 137.1 109 72.5
Lalb_Chr19g0139591 Lupinus albus HOM05D003806 ORTHO05D004346 1.3e-29 136.7 604 34.8
Ciclev10010914m.g Citrus clementina HOM05D003806 ORTHO05D004346 2.8e-29 135.6 1383 43.9
Aqoxy1G01455 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 1.4e-28 133.3 606 31.4
Glyma.12G022500 Glycine max HOM05D003806 ORTHO05D004346 4.1e-28 131.7 741 32.1
CiPaw.04G076200 Carya illinoinensis HOM05D003806 ORTHO05D004346 5.4e-28 131.3 1114 26.9
arahy.Tifrunner.gnm1.ann1.TP1CMR Arachis hypogaea HOM05D003806 ORTHO05D004346 7.0e-28 131.0 627 31.3
CANSAT64G1444 Cannabis sativa HOM05D003806 ORTHO05D004346 1.2e-27 130.2 1327 43.6
Sabra06G0014600 Salix brachista HOM05D003806 ORTHO05D004346 1.7e-26 126.3 178 51.1
Sabra06G0014700 Salix brachista HOM05D003806 ORTHO05D004346 1.7e-26 126.3 178 51.1
arahy.Tifrunner.gnm1.ann1.LI5V6E Arachis hypogaea HOM05D003806 ORTHO05D004346 2.3e-26 125.9 1398 41.2
Sabra06G0015000 Salix brachista HOM05D003806 ORTHO05D004346 2.9e-26 125.6 395 35.7
TPR.G21252 Trifolium pratense HOM05D003806 ORTHO05D004346 2.9e-26 125.6 630 31.9
SGA_v2.0_scaffold73G24430 Striga asiatica HOM05D003806 ORTHO05D004346 1.5e-25 123.2 351 34.8
FAN14G1588 Fragaria x ananassa HOM05D003806 ORTHO05D004346 2.5e-25 122.5 630 37.8
FAN14G4911 Fragaria x ananassa HOM05D003806 ORTHO05D004346 2.5e-25 122.5 630 37.8
Nitab4.5_0002232g0030 Nicotiana tabacum HOM05D003806 ORTHO05D004346 5.6e-25 121.3 1373 37.2
CSS0042337 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 2.8e-24 119.0 160 44.4
CDE02G3965 Ceratophyllum demersum HOM05D003806 ORTHO05D004346 4.7e-24 118.2 595 31.6
Sopen07g022880 Solanum pennellii HOM05D003806 ORTHO05D004346 4.7e-24 118.2 732 34.3
HPP92_009459 Vanilla planifolia HOM05D003806 ORTHO05D004346 1.8e-23 116.3 620 23.1
Lalb_Chr01g0001171 Lupinus albus HOM05D003806 ORTHO05D004346 3.0e-23 115.5 618 30.6
MELO3C016203.2 Cucumis melo HOM05D003806 ORTHO05D004346 5.2e-23 114.8 177 45.8
Nn7g38253 Nelumbo nucifera HOM05D003806 ORTHO05D004346 6.8e-23 114.4 794 28.2
CSS0010582 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 1.2e-22 113.6 594 28.6
TAR624G1065 Trochodendron aralioides HOM05D003806 ORTHO05D004346 1.5e-22 113.2 372 29.0
MSTRG.14879 Avicennia marina HOM05D003806 ORTHO05D004346 2.0e-22 112.8 617 27.2
vmacro08755 Vaccinium macrocarpon HOM05D003806 ORTHO05D004346 2.0e-22 112.8 449 36.5
DCAR_009841 Daucus carota HOM05D003806 ORTHO05D004346 4.4e-22 111.7 396 29.0
Peaxi162Scf00393g00413 Petunia axillaris HOM05D003806 ORTHO05D004346 4.4e-22 111.7 617 31.0
BcaC07g42136 Brassica carinata HOM05D003806 ORTHO05D004346 7.5e-22 110.9 341 40.8
Rhsim12G0014400 Rhododendron simsii HOM05D003806 ORTHO05D004346 9.8e-22 110.5 182 47.8
EL10Ac2g03814 Beta vulgaris HOM05D003806 ORTHO05D004346 2.9e-21 109.0 345 29.6
VMungo1127G1373 Vigna mungo HOM05D003806 ORTHO05D004346 3.7e-21 108.6 617 29.0
ECA246G1737 Erigeron canadensis HOM05D003806 ORTHO05D004346 2.4e-20 105.9 582 28.4
C01p42510 Brassica napus HOM05D003806 ORTHO05D004346 3.2e-20 105.5 113 56.6
Actinidia28585 Actinidia chinensis HOM05D003806 ORTHO05D004346 7.0e-20 104.4 1356 36.1
Sed0003037 Sechium edule HOM05D003806 ORTHO05D004346 7.0e-20 104.4 269 41.3
Ca_11242_v3 Cicer arietinum L. HOM05D003806 ORTHO05D004346 9.2e-20 104.0 622 27.8
Lj3g0015803 Lotus japonicus HOM05D003806 ORTHO05D004346 1.6e-19 103.2 342 35.4
MSTRG.6602 Avicennia marina HOM05D003806 ORTHO05D004346 2.3e-18 99.4 619 31.3
PGR031G3264 Punica granatum HOM05D003806 ORTHO05D004346 3.0e-18 99.0 174 44.3
Eucgr.A00904 Eucalyptus grandis HOM05D003806 ORTHO05D004346 1.9e-17 96.3 1410 38.0
Oeu048050.1 Olea europaea HOM05D003806 ORTHO05D004346 2.5e-17 95.9 153 38.6
Oeu021135.1 Olea europaea HOM05D003806 ORTHO05D004346 3.3e-17 95.5 155 38.1
CANSAT64G1938 Cannabis sativa HOM05D003806 ORTHO05D004346 7.3e-17 94.4 210 36.7
Medtr4g076030 Medicago truncatula HOM05D003806 ORTHO05D004346 9.5e-17 94.0 618 29.3
Oeu003096.1 Olea europaea HOM05D003806 ORTHO05D004346 9.5e-17 94.0 1355 38.5
SGA_v2.0_scaffold181G39737 Striga asiatica HOM05D003806 ORTHO05D004346 1.2e-16 93.6 304 32.2
ATR0763G047 Amborella trichopoda HOM05D003806 ORTHO05D004346 2.8e-16 92.4 147 39.5
HanXRQChr06g0171661 Helianthus annuus HOM05D003806 ORTHO05D004346 4.0e-15 88.6 367 41.4
HanXRQChr17g0541141 Helianthus annuus HOM05D003806 ORTHO05D004346 4.0e-15 88.6 177 41.8
Hund19432 Selenicereus undatus HOM05D003806 ORTHO05D004346 1.2e-14 87.0 81 54.3
Phvul.011G024500 Phaseolus vulgaris HOM05D003806 ORTHO05D004346 1.5e-14 86.7 177 41.2
AUR62020559 Chenopodium quinoa HOM05D003806 ORTHO05D004346 4.4e-14 85.1 84 51.2
Migut.M00098 Erythranthe guttata HOM05D003806 ORTHO05D004346 5.8e-14 84.7 616 27.6
AUR62020563 Chenopodium quinoa HOM05D003806 ORTHO05D004346 7.5e-14 84.3 84 51.2
Ah.11g044370 Amaranthus hybridus HOM05D003806 ORTHO05D004346 1.3e-13 83.6 154 40.9
AUR62009108 Chenopodium quinoa HOM05D003806 ORTHO05D004346 1.3e-13 83.6 84 51.2
Lsat_1_v5_gn_3_34740 Lactuca sativa HOM05D003806 ORTHO05D004346 2.0e-11 76.3 176 39.2
Sc23g0004300 Simmondsia chinensis HOM05D003806 ORTHO05D004346 4.6e-11 75.1 175 40.6
HanXRQChr15g0470351 Helianthus annuus HOM05D003806 ORTHO05D004346 7.8e-11 74.3 174 36.8
Actinidia12514 Actinidia chinensis HOM05D003806 ORTHO05D004346 1.0e-10 73.9 313 27.5
Actinidia31596 Actinidia chinensis HOM05D003806 ORTHO05D004346 5.0e-10 71.6 152 36.8
Peaxi162Scf00141g01119 Petunia axillaris HOM05D001948 ORTHO05D001873 1.2e-08 67.0 94 53.2
unitig_8.g4605 Utricularia gibba HOM05D001005 ORTHO05D000836 4.7e-08 65.1 151 30.5
BcaB01g03995 Brassica carinata HOM05D003806 ORTHO05D004346 4.0e-07 62.0 76 72.4
Zm00001eb070840 Zea mays HOM05D003806 ORTHO05D004346 4.0e-07 62.0 63 50.8
MD09G1138300 Malus domestica HOM05D003806 ORTHO05D004346 1.2e-06 60.5 196 30.1
unitig_85.g27314 Utricularia gibba HOM05D003806 ORTHO05D004346 4.4e-06 58.5 74 47.3


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