Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 0.0e+00 1278.8 669 100.0
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 0.0e+00 1169.8 673 91.7
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 0.0e+00 1158.7 672 90.9
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 0.0e+00 1122.5 674 87.1
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 0.0e+00 1118.2 675 87.3
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 0.0e+00 1109.4 674 86.4
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 2.2e-301 1038.5 675 81.9
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 2.5e-284 981.9 625 83.8
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 2.2e-280 968.8 598 86.0
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 4.6e-270 934.5 646 78.3
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 8.6e-269 930.2 627 80.5
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 2.4e-239 832.4 705 68.4
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 7.7e-217 757.7 584 68.5
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 1.9e-215 753.1 581 69.0
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 3.2e-215 752.3 594 68.4
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 4.2e-215 751.9 596 68.3
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 2.7e-214 749.2 595 67.2
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 4.6e-214 748.4 592 67.1
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 1.4e-213 746.9 576 68.2
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 1.1e-212 743.8 594 68.5
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 1.1e-212 743.8 584 69.7
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 3.3e-212 742.3 594 68.4
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 3.3e-212 742.3 585 69.6
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 1.8e-210 736.5 589 67.9
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 2.4e-210 736.1 584 67.1
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 1.5e-209 733.4 567 70.4
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 7.7e-209 731.1 579 66.8
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 1.0e-205 720.7 588 67.3
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 1.4e-205 720.3 602 64.5
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 1.4e-205 720.3 596 65.3
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 5.2e-205 718.4 599 66.1
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 3.7e-203 712.2 575 67.8
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 6.3e-203 711.4 622 63.2
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 1.1e-202 710.7 583 67.1
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 2.4e-202 709.5 599 65.9
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 1.6e-201 706.8 687 59.8
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 2.6e-201 706.1 614 65.1
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 4.5e-201 705.3 594 66.3
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 5.9e-201 704.9 602 63.0
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 4.2e-199 698.7 593 65.1
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 5.5e-199 698.4 653 60.6
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 1.4e-197 693.7 616 61.7
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 1.4e-197 693.7 585 63.9
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 2.3e-197 693.0 585 64.4
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 6.7e-197 691.4 596 64.4
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 3.3e-196 689.1 595 61.8
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 9.7e-196 687.6 595 62.9
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 1.3e-195 687.2 580 63.6
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 1.7e-195 686.8 588 64.8
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 6.3e-195 684.9 589 64.2
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 1.1e-194 684.1 590 61.4
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 1.8e-194 683.3 584 64.9
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 1.8e-194 683.3 598 64.2
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 2.7e-193 679.5 628 60.8
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 3.5e-193 679.1 587 62.0
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 7.7e-193 677.9 598 63.5
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 7.7e-193 677.9 595 62.0
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 7.7e-193 677.9 585 61.9
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 1.7e-192 676.8 615 62.0
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 2.9e-192 676.0 588 62.4
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 5.5e-191 671.8 610 61.0
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 1.2e-190 670.6 583 61.6
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 3.6e-190 669.1 585 61.9
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 1.0e-189 667.5 587 61.2
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 2.0e-188 663.3 591 61.4
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 1.3e-187 660.6 579 61.8
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 2.2e-187 659.8 592 61.3
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 4.1e-186 655.6 595 62.2
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 7.0e-186 654.8 565 63.4
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 2.7e-185 652.9 588 61.7
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 5.9e-185 651.7 596 61.2
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 3.8e-184 649.0 614 59.1
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 5.0e-184 648.7 607 60.3
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 1.7e-179 633.6 617 59.0
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 2.2e-179 633.3 466 69.3
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 6.3e-179 631.7 579 59.8
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 1.1e-178 630.9 587 60.8
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 1.8e-178 630.2 590 59.8
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 2.4e-178 629.8 654 56.3
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 5.4e-178 628.6 591 60.4
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 3.5e-177 625.9 587 58.9
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 2.3e-176 623.2 590 59.0
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 3.8e-176 622.5 584 59.4
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 3.6e-174 615.9 611 56.1
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 2.3e-173 613.2 594 58.4
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 8.9e-173 611.3 584 59.4
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 8.9e-173 611.3 585 57.6
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 3.2e-170 602.8 447 70.5
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 5.4e-170 602.1 524 64.1
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 1.2e-169 600.9 588 57.1
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 2.3e-165 586.6 437 70.9
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 5.2e-165 585.5 543 60.2
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 7.5e-164 581.6 549 57.6
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 1.1e-159 567.8 562 55.3
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 3.4e-156 556.2 550 59.6
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 1.2e-150 537.7 551 55.7
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 2.0e-148 530.4 585 50.3
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 9.2e-146 521.5 285 89.8
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 1.5e-127 461.1 613 46.7
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 7.5e-79 299.3 629 36.1
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 7.5e-79 299.3 629 36.1
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 9.1e-77 292.4 446 39.7
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 5.0e-59 233.4 425 35.1
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 1.5e-58 231.9 139 86.3
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 5.4e-37 160.2 189 47.6
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 1.6e-28 132.1 188 45.2
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 1.0e-19 102.8 133 45.9
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 4.0e-16 90.9 212 30.2
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 1.4e-13 82.4 290 30.0
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 1.9e-13 82.0 87 48.3
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 2.1e-12 78.6 212 29.7
Aa31LG5G5140 Aethionema arabicum HOM05D006787 ORTHO05D008366 1.8e-11 75.5 77 55.8
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 6.7e-11 73.6 109 32.1
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 8.7e-11 73.2 99 48.5
Cre10.g459350 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 3.7e-09 67.8 200 30.0
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 3.7e-09 67.8 127 33.1


User provided reference genes

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