Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 3.5e-191 671.4 323 100.0
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 4.7e-103 378.6 371 57.1
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 4.4e-101 372.1 371 56.6
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 1.3e-100 370.5 371 56.3
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 4.8e-100 368.6 370 56.8
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 5.3e-99 365.2 370 55.7
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 1.6e-98 363.6 371 54.2
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 8.0e-95 351.3 366 53.6
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 8.0e-95 351.3 370 54.3
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 8.0e-95 351.3 369 54.7
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 1.0e-94 350.9 369 54.7
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 4.0e-94 349.0 369 54.5
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 1.2e-93 347.4 370 54.3
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 1.2e-90 337.4 371 50.9
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 4.5e-90 335.5 371 50.4
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 5.9e-90 335.1 370 50.8
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 1.0e-89 334.3 366 53.8
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 1.3e-89 334.0 371 50.1
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 3.8e-89 332.4 371 50.9
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 5.0e-89 332.0 371 50.9
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 3.2e-88 329.3 371 49.6
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 7.2e-88 328.2 371 50.1
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 7.2e-88 328.2 364 50.5
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 2.8e-87 326.2 371 49.1
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 2.8e-87 326.2 371 49.6
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 4.7e-87 325.5 376 48.9
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 1.4e-86 323.9 400 46.5
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 1.4e-86 323.9 376 48.9
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 2.3e-86 323.2 366 49.2
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 2.3e-86 323.2 376 48.4
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 3.0e-86 322.8 371 48.8
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 4.0e-86 322.4 366 49.2
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 5.2e-86 322.0 366 48.6
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 6.8e-86 321.6 371 49.6
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 1.5e-85 320.5 370 48.6
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 2.0e-85 320.1 371 48.5
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 2.0e-85 320.1 399 46.6
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 3.4e-85 319.3 361 48.2
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 3.4e-85 319.3 385 49.1
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 4.4e-85 318.9 371 48.2
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 5.7e-85 318.5 380 48.4
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 9.8e-85 317.8 375 47.5
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 9.8e-85 317.8 370 47.6
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 2.8e-84 316.2 371 48.8
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 3.7e-84 315.8 375 49.1
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 3.7e-84 315.8 369 48.2
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 4.9e-84 315.5 371 48.0
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 4.1e-83 312.4 372 47.6
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 5.4e-83 312.0 412 45.1
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 9.2e-83 311.2 370 47.6
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 7.8e-82 308.1 384 47.9
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 7.8e-82 308.1 353 49.0
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 1.0e-81 307.8 368 47.3
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 1.7e-81 307.0 385 46.2
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 5.0e-81 305.4 371 46.1
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 8.6e-81 304.7 361 47.4
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 1.1e-80 304.3 374 45.5
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 1.5e-80 303.9 371 46.9
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 5.6e-80 302.0 393 44.8
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 9.5e-80 301.2 372 44.9
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 1.2e-79 300.8 346 48.6
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 1.2e-79 300.8 380 45.5
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 4.7e-79 298.9 370 46.5
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 6.1e-79 298.5 317 51.7
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 6.1e-79 298.5 370 46.8
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 1.2e-77 294.3 371 46.4
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 1.2e-77 294.3 409 42.8
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 2.0e-77 293.5 317 51.1
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 2.0e-77 293.5 371 47.2
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 4.4e-77 292.4 371 46.1
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 1.7e-76 290.4 371 46.6
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 1.1e-75 287.7 371 45.0
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 1.8e-75 287.0 366 46.4
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 1.2e-74 284.3 365 44.4
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 1.0e-73 281.2 378 44.2
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 6.6e-73 278.5 317 48.9
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 1.5e-72 277.3 358 46.1
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 2.5e-72 276.6 300 51.0
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 3.3e-72 276.2 317 47.0
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 5.6e-72 275.4 317 47.0
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 7.3e-72 275.0 317 47.0
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 7.3e-72 275.0 300 51.3
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 6.2e-71 271.9 316 48.1
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 4.4e-69 265.8 316 45.3
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 2.0e-66 256.9 371 41.5
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 4.3e-64 249.2 406 40.4
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 9.5e-64 248.1 317 44.2
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 1.2e-63 247.7 312 44.6
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 3.6e-63 246.1 386 39.9
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 1.3e-60 237.7 313 43.8
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 8.3e-60 235.0 390 39.2
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 4.6e-58 229.2 317 41.3
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 3.0e-57 226.5 247 49.0
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 3.3e-56 223.0 282 43.6
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 2.1e-55 220.3 372 37.1
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 6.2e-55 218.8 246 48.8
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 2.4e-54 216.9 368 39.1
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 7.1e-51 205.3 347 40.3
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 9.2e-51 204.9 373 39.1
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 1.0e-49 201.4 346 39.9
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 2.1e-47 193.7 292 42.1
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 3.2e-43 179.9 185 50.8
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.2e-34 151.4 128 58.6
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 1.7e-28 131.0 266 38.0
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 1.0e-25 121.7 497 24.5
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.6e-23 114.4 164 42.7
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 9.0e-22 108.6 413 27.8
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 8.2e-15 85.5 175 32.6
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 7.9e-10 68.9 58 56.9
BcaC05g28616 Brassica carinata HOM05D002760 ORTHO05D001361 5.1e-09 66.2 34 82.4
A07p06810 Brassica napus HOM05D002760 ORTHO05D003169 5.1e-09 66.2 34 82.4
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus HOM05D002760 ORTHO05D003169 5.1e-09 66.2 34 82.4
BraA03t12607Z Brassica rapa HOM05D002760 ORTHO05D003169 5.1e-09 66.2 34 82.4
C05p47240 Brassica napus HOM05D002760 ORTHO05D003169 1.5e-08 64.7 34 79.4
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 5.3e-06 56.2 85 38.8


User provided reference genes

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